| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401860
Identifier: 150401860
GI number: 150401860
Start: 1494474
End: 1496027
Strand: Reverse
Name: 150401860
Synonym: Maeo_1438
Alternate gene names: NA
Gene position: 1496027-1494474 (Counterclockwise)
Preceding gene: 150401864
Following gene: 150401857
Centisome position: 95.32
GC content: 30.69
Gene sequence:
>1554_bases ATGAAATTTTTAATTCTTGATGCATATACAGACGAACCTGCTGGTCTTGGAGTTCCCCCATATTTTGGGACATATCCGCG ATATACAGCAGGTGTGTTGTATAATTATAACTATGATGTATATTATATAACTATCGATAAACTACGAAGCCTTATAAAAT CAAAAGGATTTGACTTCAATAAATTCGATGTAATAATTAGTATTTGTGGTTTTCATACCCCCGGAAAATATTTAAATGCA AATCCTGCAACACTTCGGGAAATTGTATCTATTTTATACGATTTTAATGGGTTAAAGATATTAGGCGGCCCTGTTGCTAC AAAATTTGGTTCTTCTATGGAAGGGGGCAAAATAAAAGACGATAGTAAATTAAAATACTTTTTTGATGTTGTAGCGGAAG AAAACCTTGAATTAACCATTAAAGATTTAATTGAAAATAAGTTTAATTTAGAAAAAATTAATAATATAGATATAAATGCG ATTGATAATATTGATAATTATTACAAAGATATAAAGGATTATGCTATAAAGGGGGCAAAAATAATAAAACAGCACCCTAA TTATCCATATATTGTTAATGAGATTGAAACATACAGAGGTTGTTCCAGAAATATGAGCGGCGGTTGTAGTTTTTGCACAG AGCCCAGAAGGTTCGGAGCTCCCACATATAGAAATCCCAAAGACATAATAAATGAGGTAAAGGCACTATCAAAAGAAGGA GCTAAATATTATAGAATAGGAAGGCAACCATGTATGTTTTCCTATGGTGCAAAAGAAAGCGAACAATACGATGTTCCTAA ACCAAATGTAGAAACAGTTGAAAAATTATTTAAAGGTATTTCCTCGGTAAATCCGGAGGTATTACATATTGATAATGCAA ATCCAGCTGTAATTTCTCACCATCCCATAGAAAGCCGAGAAATAGCTAAAACATTGGTAAGATATTGCACAGGCGGAAAT GTGGCAGCTTTTGGAGTGGAAAGTTTTGACGAAAATGTTATTAAAAAAAATAATTTATTTACCACTCCCGAAGATGTATT GAATGCCACAAAATTATTAAATGAAGTAGGTGGATTAAGGAGCTCCACAGGTATGCCTTATTTATTGCCTGGAATAAATT TATTGTTTGGACTAAAAGGCGAAACAAAAGAAACTTTTGAGATAAATTATAGTTATTTAAAAGAAATACAAAATGATAAC CTATTAATAAGAAGAATAAATATAAGGCAGGTTGTTCCATTCTTTGGCACAGATATTACTGAAAAAGATGTTAAAAAAGC AGAAAAAAGAAAAACGATATTTAAAAGCTTTAAGGAAAAAGTTAGAAAAGATATTGACAATAATATGTTAAGAAAAATGC TGCCGATTGGGAGCATATTAAAAAATGTATTTATAGAATTGAAAGAAAAAGAAAATCTTTATTTTGGGCGACAATTTGGT AGTTATCCGTTGTTAATTGGAATAGAAAATAAAGATTTAAAATTAAATAGTTTTGTAGATGTTGAAATAACAGGTTATGG TCGCCGTTCTATTACAGGACGGGCAATAATTTAA
Upstream 100 bases:
>100_bases ATTTCTCGCTATCGCTCGAAAAGGTTCGGACCAAAATTCAAAACTCACTTCGTTCGTTTTGAACAATAATAAGTAATATA AGAGTAATATAAGGGATAAT
Downstream 100 bases:
>100_bases CCATAATTTCTGTTTATAGTCAATCTTCGAACTGTTTCACTAAATCATATTCTCCAACCCCATATTTTGCTTTTAATAAT AAAATTCGTTTACAAAATCT
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFNKFDVIISICGFHTPGKYLNA NPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKDDSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINA IDNIDNYYKDIKDYAIKGAKIIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISHHPIESREIAKTLVRYCTGGN VAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLRSSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDN LLIRRINIRQVVPFFGTDITEKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII
Sequences:
>Translated_517_residues MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFNKFDVIISICGFHTPGKYLNA NPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKDDSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINA IDNIDNYYKDIKDYAIKGAKIIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISHHPIESREIAKTLVRYCTGGN VAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLRSSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDN LLIRRINIRQVVPFFGTDITEKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII >Mature_517_residues MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFNKFDVIISICGFHTPGKYLNA NPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKDDSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINA IDNIDNYYKDIKDYAIKGAKIIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISHHPIESREIAKTLVRYCTGGN VAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLRSSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDN LLIRRINIRQVVPFFGTDITEKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII
Specific function: Unknown
COG id: COG1031
COG function: function code C; Uncharacterized Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TRAM domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 - InterPro: IPR002792 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 58772; Mature: 58772
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFN CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHCCCCCC KFDVIISICGFHTPGKYLNANPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKD HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCCC DSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINAIDNIDNYYKDIKDYAIKGAK CCHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHCCHH IIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG HHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCC AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISH CCEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEC HPIESREIAKTLVRYCTGGNVAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLR CCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC SSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDNLLIRRINIRQVVPFFGTDIT CCCCCCEEECCCCEEEECCCCCCCEEEECHHHHHHHCCCCEEEEEECHHHHHHHHCCCCC EKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII CCEEEEEECCCCEEECCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFN CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHCCCCCC KFDVIISICGFHTPGKYLNANPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKD HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCCC DSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINAIDNIDNYYKDIKDYAIKGAK CCHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHCCHH IIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG HHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCC AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISH CCEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEC HPIESREIAKTLVRYCTGGNVAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLR CCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC SSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDNLLIRRINIRQVVPFFGTDIT CCCCCCEEECCCCEEEECCCCCCCEEEECHHHHHHHCCCCEEEEEECHHHHHHHHCCCCC EKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII CCEEEEEECCCCEEECCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]