Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401860

Identifier: 150401860

GI number: 150401860

Start: 1494474

End: 1496027

Strand: Reverse

Name: 150401860

Synonym: Maeo_1438

Alternate gene names: NA

Gene position: 1496027-1494474 (Counterclockwise)

Preceding gene: 150401864

Following gene: 150401857

Centisome position: 95.32

GC content: 30.69

Gene sequence:

>1554_bases
ATGAAATTTTTAATTCTTGATGCATATACAGACGAACCTGCTGGTCTTGGAGTTCCCCCATATTTTGGGACATATCCGCG
ATATACAGCAGGTGTGTTGTATAATTATAACTATGATGTATATTATATAACTATCGATAAACTACGAAGCCTTATAAAAT
CAAAAGGATTTGACTTCAATAAATTCGATGTAATAATTAGTATTTGTGGTTTTCATACCCCCGGAAAATATTTAAATGCA
AATCCTGCAACACTTCGGGAAATTGTATCTATTTTATACGATTTTAATGGGTTAAAGATATTAGGCGGCCCTGTTGCTAC
AAAATTTGGTTCTTCTATGGAAGGGGGCAAAATAAAAGACGATAGTAAATTAAAATACTTTTTTGATGTTGTAGCGGAAG
AAAACCTTGAATTAACCATTAAAGATTTAATTGAAAATAAGTTTAATTTAGAAAAAATTAATAATATAGATATAAATGCG
ATTGATAATATTGATAATTATTACAAAGATATAAAGGATTATGCTATAAAGGGGGCAAAAATAATAAAACAGCACCCTAA
TTATCCATATATTGTTAATGAGATTGAAACATACAGAGGTTGTTCCAGAAATATGAGCGGCGGTTGTAGTTTTTGCACAG
AGCCCAGAAGGTTCGGAGCTCCCACATATAGAAATCCCAAAGACATAATAAATGAGGTAAAGGCACTATCAAAAGAAGGA
GCTAAATATTATAGAATAGGAAGGCAACCATGTATGTTTTCCTATGGTGCAAAAGAAAGCGAACAATACGATGTTCCTAA
ACCAAATGTAGAAACAGTTGAAAAATTATTTAAAGGTATTTCCTCGGTAAATCCGGAGGTATTACATATTGATAATGCAA
ATCCAGCTGTAATTTCTCACCATCCCATAGAAAGCCGAGAAATAGCTAAAACATTGGTAAGATATTGCACAGGCGGAAAT
GTGGCAGCTTTTGGAGTGGAAAGTTTTGACGAAAATGTTATTAAAAAAAATAATTTATTTACCACTCCCGAAGATGTATT
GAATGCCACAAAATTATTAAATGAAGTAGGTGGATTAAGGAGCTCCACAGGTATGCCTTATTTATTGCCTGGAATAAATT
TATTGTTTGGACTAAAAGGCGAAACAAAAGAAACTTTTGAGATAAATTATAGTTATTTAAAAGAAATACAAAATGATAAC
CTATTAATAAGAAGAATAAATATAAGGCAGGTTGTTCCATTCTTTGGCACAGATATTACTGAAAAAGATGTTAAAAAAGC
AGAAAAAAGAAAAACGATATTTAAAAGCTTTAAGGAAAAAGTTAGAAAAGATATTGACAATAATATGTTAAGAAAAATGC
TGCCGATTGGGAGCATATTAAAAAATGTATTTATAGAATTGAAAGAAAAAGAAAATCTTTATTTTGGGCGACAATTTGGT
AGTTATCCGTTGTTAATTGGAATAGAAAATAAAGATTTAAAATTAAATAGTTTTGTAGATGTTGAAATAACAGGTTATGG
TCGCCGTTCTATTACAGGACGGGCAATAATTTAA

Upstream 100 bases:

>100_bases
ATTTCTCGCTATCGCTCGAAAAGGTTCGGACCAAAATTCAAAACTCACTTCGTTCGTTTTGAACAATAATAAGTAATATA
AGAGTAATATAAGGGATAAT

Downstream 100 bases:

>100_bases
CCATAATTTCTGTTTATAGTCAATCTTCGAACTGTTTCACTAAATCATATTCTCCAACCCCATATTTTGCTTTTAATAAT
AAAATTCGTTTACAAAATCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFNKFDVIISICGFHTPGKYLNA
NPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKDDSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINA
IDNIDNYYKDIKDYAIKGAKIIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG
AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISHHPIESREIAKTLVRYCTGGN
VAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLRSSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDN
LLIRRINIRQVVPFFGTDITEKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG
SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII

Sequences:

>Translated_517_residues
MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFNKFDVIISICGFHTPGKYLNA
NPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKDDSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINA
IDNIDNYYKDIKDYAIKGAKIIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG
AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISHHPIESREIAKTLVRYCTGGN
VAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLRSSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDN
LLIRRINIRQVVPFFGTDITEKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG
SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII
>Mature_517_residues
MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFNKFDVIISICGFHTPGKYLNA
NPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKDDSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINA
IDNIDNYYKDIKDYAIKGAKIIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG
AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISHHPIESREIAKTLVRYCTGGN
VAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLRSSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDN
LLIRRINIRQVVPFFGTDITEKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG
SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 58772; Mature: 58772

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFN
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHCCCCCC
KFDVIISICGFHTPGKYLNANPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKD
HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCCC
DSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINAIDNIDNYYKDIKDYAIKGAK
CCHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHCCHH
IIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG
HHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCC
AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISH
CCEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEC
HPIESREIAKTLVRYCTGGNVAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLR
CCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
SSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDNLLIRRINIRQVVPFFGTDIT
CCCCCCEEECCCCEEEECCCCCCCEEEECHHHHHHHCCCCEEEEEECHHHHHHHHCCCCC
EKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII
CCEEEEEECCCCEEECCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKFLILDAYTDEPAGLGVPPYFGTYPRYTAGVLYNYNYDVYYITIDKLRSLIKSKGFDFN
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHCCCCCC
KFDVIISICGFHTPGKYLNANPATLREIVSILYDFNGLKILGGPVATKFGSSMEGGKIKD
HHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCCC
DSKLKYFFDVVAEENLELTIKDLIENKFNLEKINNIDINAIDNIDNYYKDIKDYAIKGAK
CCHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHCCHH
IIKQHPNYPYIVNEIETYRGCSRNMSGGCSFCTEPRRFGAPTYRNPKDIINEVKALSKEG
HHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCC
AKYYRIGRQPCMFSYGAKESEQYDVPKPNVETVEKLFKGISSVNPEVLHIDNANPAVISH
CCEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEC
HPIESREIAKTLVRYCTGGNVAAFGVESFDENVIKKNNLFTTPEDVLNATKLLNEVGGLR
CCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
SSTGMPYLLPGINLLFGLKGETKETFEINYSYLKEIQNDNLLIRRINIRQVVPFFGTDIT
CCCCCCEEECCCCEEEECCCCCCCEEEECHHHHHHHCCCCEEEEEECHHHHHHHHCCCCC
EKDVKKAEKRKTIFKSFKEKVRKDIDNNMLRKMLPIGSILKNVFIELKEKENLYFGRQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
SYPLLIGIENKDLKLNSFVDVEITGYGRRSITGRAII
CCEEEEEECCCCEEECCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]