| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is nifH1 [H]
Identifier: 150401856
GI number: 150401856
Start: 1488055
End: 1488906
Strand: Reverse
Name: nifH1 [H]
Synonym: Maeo_1434
Alternate gene names: 150401856
Gene position: 1488906-1488055 (Counterclockwise)
Preceding gene: 150401857
Following gene: 150401855
Centisome position: 94.86
GC content: 36.62
Gene sequence:
>852_bases ATGAGTTTCGACGAAATTGCTCCGGAAGCAAAAAAAATAGCAATATATGGAAAAGGAGGTATTGGAAAATCAACCACTAC ACAAAATATGGCAGCAGCTCTTGCTCACTTTTTAGGCCATAAAGTAATGATACACGGATGTGACCCAAAAGCAGATTCAA CAAGAATGATTCTCCACGGAATGGGGCAAAATACAGTAATGGATGTATTGAGGGATGAAGGGGAAGATGCAATTACACTT GAAAAAGTTAGAAAACAAGGATTTGGAGGTATCTACTGTGTTGAGAGTGGAGGTCCTGAGCCAGGAGTAGGATGTGCTGG TAGAGGAGTTATTACAGCTGTTGATACAATGAGAGAATTAGAAGGATATCCAGATGATTTGGATAATTTATTCTTCGATG TTCTTGGGGATGTTGTATGTGGTGGTTTCGCAATGCCACTTAGAGATGGATTAGCAGAAGAAATATATATCGTTACATCA GGGGAAATGATGGCATTATATGCTGCAAACAATATTGCAAAAGGTATTTTAAAGTATGCCGACCAGTCAGGAGTTAGATT AGGGGGAATTATCTGTAATTCAAGAAAAGTAGATGGAGAAAAAGAATTAATGGAAGAATTTGTTGAAAAATTAGGAACAA AATTAATCCACTTTGTCCCAAGAGACAATATCGTTCAGAAAGCAGAATTTAACAAACAAACAGTAATCGAATATGACCCA GAATGTAATCAAGCAAAAGAATACAGAACCTTGGTCGAAAATATTACGGCAAATGAAGATTTAGTAAAACCTACGCCATT GTCAATGGAGGAATTAGAGCAGTTAGTGGAAAAATACGGATTATTAGATTAA
Upstream 100 bases:
>100_bases CGGAAATATATTTCCGTATACCTACAATAAAATAGGAAGTATTATTCCAATATAACAATTAGTAAAATTAAAATTTAAAA AAAATAATAAGGTGTGTTAA
Downstream 100 bases:
>100_bases TTCTATAATTATTAATCCTATTTAATTATTTTAATAAATTAGAGATAGTAAATCGACGACATTTATTGATATGCCTATAA AGTAGATAACAGAATAATTA
Product: nitrogenase iron protein
Products: NA
Alternate protein names: Nitrogenase Fe protein 1; Nitrogenase component II; Nitrogenase reductase [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSFDEIAPEAKKIAIYGKGGIGKSTTTQNMAAALAHFLGHKVMIHGCDPKADSTRMILHGMGQNTVMDVLRDEGEDAITL EKVRKQGFGGIYCVESGGPEPGVGCAGRGVITAVDTMRELEGYPDDLDNLFFDVLGDVVCGGFAMPLRDGLAEEIYIVTS GEMMALYAANNIAKGILKYADQSGVRLGGIICNSRKVDGEKELMEEFVEKLGTKLIHFVPRDNIVQKAEFNKQTVIEYDP ECNQAKEYRTLVENITANEDLVKPTPLSMEELEQLVEKYGLLD
Sequences:
>Translated_283_residues MSFDEIAPEAKKIAIYGKGGIGKSTTTQNMAAALAHFLGHKVMIHGCDPKADSTRMILHGMGQNTVMDVLRDEGEDAITL EKVRKQGFGGIYCVESGGPEPGVGCAGRGVITAVDTMRELEGYPDDLDNLFFDVLGDVVCGGFAMPLRDGLAEEIYIVTS GEMMALYAANNIAKGILKYADQSGVRLGGIICNSRKVDGEKELMEEFVEKLGTKLIHFVPRDNIVQKAEFNKQTVIEYDP ECNQAKEYRTLVENITANEDLVKPTPLSMEELEQLVEKYGLLD >Mature_282_residues SFDEIAPEAKKIAIYGKGGIGKSTTTQNMAAALAHFLGHKVMIHGCDPKADSTRMILHGMGQNTVMDVLRDEGEDAITLE KVRKQGFGGIYCVESGGPEPGVGCAGRGVITAVDTMRELEGYPDDLDNLFFDVLGDVVCGGFAMPLRDGLAEEIYIVTSG EMMALYAANNIAKGILKYADQSGVRLGGIICNSRKVDGEKELMEEFVEKLGTKLIHFVPRDNIVQKAEFNKQTVIEYDPE CNQAKEYRTLVENITANEDLVKPTPLSMEELEQLVEKYGLLD
Specific function: The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components:the iron protein and the molybdenum-iron protein [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000392 - InterPro: IPR005977 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: =1.18.6.1 [H]
Molecular weight: Translated: 30933; Mature: 30802
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00065 D_2_HYDROXYACID_DH_1 ; PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDEIAPEAKKIAIYGKGGIGKSTTTQNMAAALAHFLGHKVMIHGCDPKADSTRMILHG CCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEC MGQNTVMDVLRDEGEDAITLEKVRKQGFGGIYCVESGGPEPGVGCAGRGVITAVDTMREL CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH EGYPDDLDNLFFDVLGDVVCGGFAMPLRDGLAEEIYIVTSGEMMALYAANNIAKGILKYA CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHH DQSGVRLGGIICNSRKVDGEKELMEEFVEKLGTKLIHFVPRDNIVQKAEFNKQTVIEYDP CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCEEEEECC ECNQAKEYRTLVENITANEDLVKPTPLSMEELEQLVEKYGLLD CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SFDEIAPEAKKIAIYGKGGIGKSTTTQNMAAALAHFLGHKVMIHGCDPKADSTRMILHG CCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEC MGQNTVMDVLRDEGEDAITLEKVRKQGFGGIYCVESGGPEPGVGCAGRGVITAVDTMREL CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH EGYPDDLDNLFFDVLGDVVCGGFAMPLRDGLAEEIYIVTSGEMMALYAANNIAKGILKYA CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHH DQSGVRLGGIICNSRKVDGEKELMEEFVEKLGTKLIHFVPRDNIVQKAEFNKQTVIEYDP CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCEEEEECC ECNQAKEYRTLVENITANEDLVKPTPLSMEELEQLVEKYGLLD CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2503679 [H]