Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401836

Identifier: 150401836

GI number: 150401836

Start: 1470036

End: 1471280

Strand: Reverse

Name: 150401836

Synonym: Maeo_1414

Alternate gene names: NA

Gene position: 1471280-1470036 (Counterclockwise)

Preceding gene: 150401837

Following gene: 150401830

Centisome position: 93.74

GC content: 23.05

Gene sequence:

>1245_bases
ATGTCTATGCTAATAATCGATGTTAATCACGGAGCTCCCGAGTTGGCAAAAGAGTATATTGAATTAGGTTATGGTGTGTC
AATATGGGACATATACGGAAAATTAGATAAAGAAAAAAATTTTTTAAATAATATTAATTTCAAAGAAATTAATAAAATAA
ATATTTTAAAATCCACAGAAGAACCAAAATTTAATAATTATGATAAAATTATAGCCCCCATTCACTGCCCCATAGATGTG
GATTTTATGTCATTTCATGATGCCACATCTGAAATAATAAAAGAAAAATATGGAAGCATACATAAAAAATTTATAGAAAT
TACAGGAGTAAAAGGAAAAACCACAACAACGGAGCTAATTAACCATATATTAAGGGAAGAATATAACACATATCTAAATA
ACAGCAATAAAGGTTCTATTGCACCAGTTTCAATATTAAATTGTATTAACTACTTAAATGAAATAAATAAAATTGATTTT
TACGATATTTTCATTTTTGAAGTATCTTTGGGGCTAACTTCTTGCGAATATGGTGCAATTACAAATATACTTGAAAATTA
TCCCATTGCAAAAGGAAGGAAAGATGCTTTTATGGCTAAATGTTCCACACTAAAAAATGCAAATAAAAAATTCGTTAATA
AAAATTTACTAAAATCAGATATCTTTGAAAATATAGATACTGTAATTGATATAAATAAAACAGAGTTATTATCAAAATAT
CCGCTTCGTTATGAATATAATAATAAAATAGTTGAATTTAATAACAACATTTTTGGAAGTCATTTTATTGAAAATTCATT
ATTTGGGATTGAAATTTGTAAAAATTTTATGGATATTGATACCATTGTCGATAAAATAAAATCATTTAAAATAAATGGTA
GAATGAATGTTGTTAAAAAAGAAAATAATTGTTATTTAATTGAAAATATAAATCCTGGGTTAAATGTAAAATCAATAGAT
AATACAATTAATGATTTTATAAACGAGTTTATAAATGATTTTGATAATAAAAATGGATATATTTTAATTGGCGGAGATTT
TGGTTGCACTTGCGAAGAAATAAATATTGAAAAATTGTCAAAAGTCATTAAAAAATATCTTTCCAATAAAAATATTAAAT
TTATATTGTCTGGCGACCTTGGAAAAGAATTAAAAAAATATTTTGATTTTGAATATATTGATAATATTGATTATGATAAA
TATAATGGTAATTTGTTAAAAATATATCGTAAAAAAATATGTTAA

Upstream 100 bases:

>100_bases
AAAAAAGTTGGATTGGGTTGTGGGATGGGGCTCAATAGAACGATGAAATCATTATCGGATTATCCAAAGGAGCTCCTTAA
AAAAATTTAAAGGTATCATT

Downstream 100 bases:

>100_bases
TATTGGAACCCCGGGAGCTCCCAAAATATTTATGCCAACAACCCATAATTTAATATAAACAGTAGAACCATTATCGAAAT
TGTAATTCCCAATACTTTTT

Product: Mur ligase middle domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSMLIIDVNHGAPELAKEYIELGYGVSIWDIYGKLDKEKNFLNNINFKEINKINILKSTEEPKFNNYDKIIAPIHCPIDV
DFMSFHDATSEIIKEKYGSIHKKFIEITGVKGKTTTTELINHILREEYNTYLNNSNKGSIAPVSILNCINYLNEINKIDF
YDIFIFEVSLGLTSCEYGAITNILENYPIAKGRKDAFMAKCSTLKNANKKFVNKNLLKSDIFENIDTVIDINKTELLSKY
PLRYEYNNKIVEFNNNIFGSHFIENSLFGIEICKNFMDIDTIVDKIKSFKINGRMNVVKKENNCYLIENINPGLNVKSID
NTINDFINEFINDFDNKNGYILIGGDFGCTCEEINIEKLSKVIKKYLSNKNIKFILSGDLGKELKKYFDFEYIDNIDYDK
YNGNLLKIYRKKIC

Sequences:

>Translated_414_residues
MSMLIIDVNHGAPELAKEYIELGYGVSIWDIYGKLDKEKNFLNNINFKEINKINILKSTEEPKFNNYDKIIAPIHCPIDV
DFMSFHDATSEIIKEKYGSIHKKFIEITGVKGKTTTTELINHILREEYNTYLNNSNKGSIAPVSILNCINYLNEINKIDF
YDIFIFEVSLGLTSCEYGAITNILENYPIAKGRKDAFMAKCSTLKNANKKFVNKNLLKSDIFENIDTVIDINKTELLSKY
PLRYEYNNKIVEFNNNIFGSHFIENSLFGIEICKNFMDIDTIVDKIKSFKINGRMNVVKKENNCYLIENINPGLNVKSID
NTINDFINEFINDFDNKNGYILIGGDFGCTCEEINIEKLSKVIKKYLSNKNIKFILSGDLGKELKKYFDFEYIDNIDYDK
YNGNLLKIYRKKIC
>Mature_413_residues
SMLIIDVNHGAPELAKEYIELGYGVSIWDIYGKLDKEKNFLNNINFKEINKINILKSTEEPKFNNYDKIIAPIHCPIDVD
FMSFHDATSEIIKEKYGSIHKKFIEITGVKGKTTTTELINHILREEYNTYLNNSNKGSIAPVSILNCINYLNEINKIDFY
DIFIFEVSLGLTSCEYGAITNILENYPIAKGRKDAFMAKCSTLKNANKKFVNKNLLKSDIFENIDTVIDINKTELLSKYP
LRYEYNNKIVEFNNNIFGSHFIENSLFGIEICKNFMDIDTIVDKIKSFKINGRMNVVKKENNCYLIENINPGLNVKSIDN
TINDFINEFINDFDNKNGYILIGGDFGCTCEEINIEKLSKVIKKYLSNKNIKFILSGDLGKELKKYFDFEYIDNIDYDKY
NGNLLKIYRKKIC

Specific function: Unknown

COG id: COG0770

COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013221 [H]

Pfam domain/function: PF08245 Mur_ligase_M [H]

EC number: NA

Molecular weight: Translated: 47877; Mature: 47745

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLIIDVNHGAPELAKEYIELGYGVSIWDIYGKLDKEKNFLNNINFKEINKINILKSTE
CEEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCHHHCCEEEEEECCC
EPKFNNYDKIIAPIHCPIDVDFMSFHDATSEIIKEKYGSIHKKFIEITGVKGKTTTTELI
CCCCCCCCCEEEEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHH
NHILREEYNTYLNNSNKGSIAPVSILNCINYLNEINKIDFYDIFIFEVSLGLTSCEYGAI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHH
TNILENYPIAKGRKDAFMAKCSTLKNANKKFVNKNLLKSDIFENIDTVIDINKTELLSKY
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHC
PLRYEYNNKIVEFNNNIFGSHFIENSLFGIEICKNFMDIDTIVDKIKSFKINGRMNVVKK
CCEEEECCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEECCEEEEEEE
ENNCYLIENINPGLNVKSIDNTINDFINEFINDFDNKNGYILIGGDFGCTCEEINIEKLS
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHH
KVIKKYLSNKNIKFILSGDLGKELKKYFDFEYIDNIDYDKYNGNLLKIYRKKIC
HHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SMLIIDVNHGAPELAKEYIELGYGVSIWDIYGKLDKEKNFLNNINFKEINKINILKSTE
EEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCHHHCCEEEEEECCC
EPKFNNYDKIIAPIHCPIDVDFMSFHDATSEIIKEKYGSIHKKFIEITGVKGKTTTTELI
CCCCCCCCCEEEEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHH
NHILREEYNTYLNNSNKGSIAPVSILNCINYLNEINKIDFYDIFIFEVSLGLTSCEYGAI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHH
TNILENYPIAKGRKDAFMAKCSTLKNANKKFVNKNLLKSDIFENIDTVIDINKTELLSKY
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHC
PLRYEYNNKIVEFNNNIFGSHFIENSLFGIEICKNFMDIDTIVDKIKSFKINGRMNVVKK
CCEEEECCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEECCEEEEEEE
ENNCYLIENINPGLNVKSIDNTINDFINEFINDFDNKNGYILIGGDFGCTCEEINIEKLS
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHH
KVIKKYLSNKNIKFILSGDLGKELKKYFDFEYIDNIDYDKYNGNLLKIYRKKIC
HHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]