Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401771

Identifier: 150401771

GI number: 150401771

Start: 1411262

End: 1412440

Strand: Reverse

Name: 150401771

Synonym: Maeo_1349

Alternate gene names: NA

Gene position: 1412440-1411262 (Counterclockwise)

Preceding gene: 150401772

Following gene: 150401770

Centisome position: 89.99

GC content: 29.52

Gene sequence:

>1179_bases
ATGGATATTGACAATTATGATGTTATTATAGTCGGAGGAGGTCCTGCGGGATGCATAACTGGGGAAAATATAAAAAATCA
TAAAGTTTTAATAATTGAAGAACACCAATGTATCGGAACCCCATTGCAATGTGCAGGATTAATCAGCACAAACGGAGTTA
AAGAACTTGGAGCTCCCAGGGGTTGTGTAAATGATATTAAAGGAGCATACATATATTCCCAAAATAAGGTCATAAAAGTT
GGGAATAATAAAATAAGGGCAAAAGTATATGAAAGAAAAGTTATGGACAAAGATATAGCCATAAGAGCGTCTAAAAATAA
AAATGTAGATATTTTATTAAAAGCTCATGGTCAAATAATCGAGGATAAAAATAAAAATAAATCGAGATTTTTTAATAAAA
ATAATAATTATGGATTATCAATAAACCACGACGGAAACAAATATAATGCTTTTCCAAAAATAATAGTTGGTGCAGATGGG
GCAAAATCATTTATTGGGAAATCGGCAAATATTGTTAAAAAAAGAGAGATATTAGCAGGGGCACAGCTGGAAATGGCTAA
TGTGGATATTGATACCGATTTTGTCCATGTATTTATAGACAATAGATATTGTAAAGATTTTTTTATTTGGATAATTCCGA
TGGGAAAAGATAGAGTTAGGGTAGGATTATGCGATAGCTCTAATTCATACAACAAATTATTAAATTTTATAAATAATCAT
CCCATAGCATCAAATTTATTAAAAAATGCCGTTCCAATAGAGTTTTCAGTGGGAACACTTCCAATAGGATATAATAAATC
ATCTGTAAAAAATAATTTAATGCTTGTAGGAGATTCCGCCGGACAAATAAAACCCATTAGTGGAGGGGGATTATATTATG
GTGCAAAAAGTGCCAAAATATGTGGAGAAATTATTACAAATTATCTTTCCGAGGAGCTCCCTGTTAATTATTTAAAAAAT
TATGATAAACAGTGGAAACAACAATTTAAAAGAGAAATAGATTTTGGGATAAAATTTAGAAAGATACTGTATAATATGAA
CAATAACTCATTGGATAAAATATTAGAATTCATAATCCAAAATGATTTAATAAATTTCATAAATGACAATGGGGATATGG
ACAGACCTTCGACTATTTTAAATGAAATAATTAGCTCCAAAATAGGATTTAAAATATAA

Upstream 100 bases:

>100_bases
TTTTTAATTTTTTAATTTTGTTTGTTATATTATACGATTATACTCCATATATTATATTTTATTTAATTTCATATATTATT
GGTTTTATTTTGGGGATATT

Downstream 100 bases:

>100_bases
TTACTATTTTTATATATCTGATATTACCATATGTATTAAAATATAAATATTGGTGATAATAGTATGAAAAAGCTATTTGT
TGTATTATTTTGTATTTTTA

Product: geranylgeranyl reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MDIDNYDVIIVGGGPAGCITGENIKNHKVLIIEEHQCIGTPLQCAGLISTNGVKELGAPRGCVNDIKGAYIYSQNKVIKV
GNNKIRAKVYERKVMDKDIAIRASKNKNVDILLKAHGQIIEDKNKNKSRFFNKNNNYGLSINHDGNKYNAFPKIIVGADG
AKSFIGKSANIVKKREILAGAQLEMANVDIDTDFVHVFIDNRYCKDFFIWIIPMGKDRVRVGLCDSSNSYNKLLNFINNH
PIASNLLKNAVPIEFSVGTLPIGYNKSSVKNNLMLVGDSAGQIKPISGGGLYYGAKSAKICGEIITNYLSEELPVNYLKN
YDKQWKQQFKREIDFGIKFRKILYNMNNNSLDKILEFIIQNDLINFINDNGDMDRPSTILNEIISSKIGFKI

Sequences:

>Translated_392_residues
MDIDNYDVIIVGGGPAGCITGENIKNHKVLIIEEHQCIGTPLQCAGLISTNGVKELGAPRGCVNDIKGAYIYSQNKVIKV
GNNKIRAKVYERKVMDKDIAIRASKNKNVDILLKAHGQIIEDKNKNKSRFFNKNNNYGLSINHDGNKYNAFPKIIVGADG
AKSFIGKSANIVKKREILAGAQLEMANVDIDTDFVHVFIDNRYCKDFFIWIIPMGKDRVRVGLCDSSNSYNKLLNFINNH
PIASNLLKNAVPIEFSVGTLPIGYNKSSVKNNLMLVGDSAGQIKPISGGGLYYGAKSAKICGEIITNYLSEELPVNYLKN
YDKQWKQQFKREIDFGIKFRKILYNMNNNSLDKILEFIIQNDLINFINDNGDMDRPSTILNEIISSKIGFKI
>Mature_392_residues
MDIDNYDVIIVGGGPAGCITGENIKNHKVLIIEEHQCIGTPLQCAGLISTNGVKELGAPRGCVNDIKGAYIYSQNKVIKV
GNNKIRAKVYERKVMDKDIAIRASKNKNVDILLKAHGQIIEDKNKNKSRFFNKNNNYGLSINHDGNKYNAFPKIIVGADG
AKSFIGKSANIVKKREILAGAQLEMANVDIDTDFVHVFIDNRYCKDFFIWIIPMGKDRVRVGLCDSSNSYNKLLNFINNH
PIASNLLKNAVPIEFSVGTLPIGYNKSSVKNNLMLVGDSAGQIKPISGGGLYYGAKSAKICGEIITNYLSEELPVNYLKN
YDKQWKQQFKREIDFGIKFRKILYNMNNNSLDKILEFIIQNDLINFINDNGDMDRPSTILNEIISSKIGFKI

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 43792; Mature: 43792

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDNYDVIIVGGGPAGCITGENIKNHKVLIIEEHQCIGTPLQCAGLISTNGVKELGAPR
CCCCCEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCCCCHHEEEEECCCCHHHHCCCC
GCVNDIKGAYIYSQNKVIKVGNNKIRAKVYERKVMDKDIAIRASKNKNVDILLKAHGQII
CHHHHCCCEEEEECCCEEEECCCEEEHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEE
EDKNKNKSRFFNKNNNYGLSINHDGNKYNAFPKIIVGADGAKSFIGKSANIVKKREILAG
CCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHCC
AQLEMANVDIDTDFVHVFIDNRYCKDFFIWIIPMGKDRVRVGLCDSSNSYNKLLNFINNH
CEEEEEECCCCCCEEEEEECCCEECEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCC
PIASNLLKNAVPIEFSVGTLPIGYNKSSVKNNLMLVGDSAGQIKPISGGGLYYGAKSAKI
CHHHHHHHCCCCEEEECCEEEECCCHHHCCCCEEEEECCCCCEEECCCCCEEECCCHHHH
CGEIITNYLSEELPVNYLKNYDKQWKQQFKREIDFGIKFRKILYNMNNNSLDKILEFIIQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHEEECCCCCHHHHHHHHHH
NDLINFINDNGDMDRPSTILNEIISSKIGFKI
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIDNYDVIIVGGGPAGCITGENIKNHKVLIIEEHQCIGTPLQCAGLISTNGVKELGAPR
CCCCCEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCCCCHHEEEEECCCCHHHHCCCC
GCVNDIKGAYIYSQNKVIKVGNNKIRAKVYERKVMDKDIAIRASKNKNVDILLKAHGQII
CHHHHCCCEEEEECCCEEEECCCEEEHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEE
EDKNKNKSRFFNKNNNYGLSINHDGNKYNAFPKIIVGADGAKSFIGKSANIVKKREILAG
CCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHCC
AQLEMANVDIDTDFVHVFIDNRYCKDFFIWIIPMGKDRVRVGLCDSSNSYNKLLNFINNH
CEEEEEECCCCCCEEEEEECCCEECEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCC
PIASNLLKNAVPIEFSVGTLPIGYNKSSVKNNLMLVGDSAGQIKPISGGGLYYGAKSAKI
CHHHHHHHCCCCEEEECCEEEECCCHHHCCCCEEEEECCCCCEEECCCCCEEECCCHHHH
CGEIITNYLSEELPVNYLKNYDKQWKQQFKREIDFGIKFRKILYNMNNNSLDKILEFIIQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHEEECCCCCHHHHHHHHHH
NDLINFINDNGDMDRPSTILNEIISSKIGFKI
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]