| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is thrS
Identifier: 150401612
GI number: 150401612
Start: 1255951
End: 1257843
Strand: Reverse
Name: thrS
Synonym: Maeo_1189
Alternate gene names: 150401612
Gene position: 1257843-1255951 (Counterclockwise)
Preceding gene: 150401613
Following gene: 150401610
Centisome position: 80.14
GC content: 33.28
Gene sequence:
>1893_bases TTGAAAGTTTTATTGATTCACTCAGATTATTTGGAATTTGAAGCAAAACAAAAAACAAAAATTGCAGAAGATACAGACAT ATTAAATGGAAAAATGGAGGAATGTTTAACTGTTTTTATGGCTGTTGAGAAAGAGGATGAAGAAAATCCGCAAAATGTAA TATATAATACAGTAGATGAGATAATAAAAACAGCCGAAAACTTAAAAATTAATAATGTGGTTGTTTATCCTTATGCCCAT TTATCAAGTGAGTTAAGCTCCCCAAAGGTTGCAAAAGAAGTTTTACAGAAAATTGAAGAAGAATTAAAACAAAAAAATTA TTCTGTTTTGAGAGCTCCATTTGGCTGGTATAAATCATTTAAGATTAGCTGTAAAGGACATCCATTAAGTGAATTATCTA GAAAAATAACCACAGAACGGAAAGAGGAAAAAGGAGAAACGGAGGCAAAAGACAGACCCAAAAATAAATTCTACATCCTT GATGGAGAAAAAGGAGAGGAAGGATTAAAAGAATTAGATGAAAAAAAGGTTAAAAAATTAAAAGATAAAGGTTTAAAATC CGTAGCCATGCATGAAATGGGAATAAAGCATGGAGGTAAAGAAAAGGATATAGAGCCACCACATGTTAAATTTATTACGG AAAAAGAAATCTGCGACTATGAACCTTCTTCCGATGCCGGACATTTTAGATGGTATCCAAAGGGGAAACTCATAAGAGAC CTTTTGCAGGATTATGTTTATAATATGGTTGTAGAAAACAACGGTATGCCTGTTGAAACACCTGTAATGTATGATTTGGG AAATAAAGCAATAAAAGAACATGCAGATAAATTTGGAGAAAGACAGTACAGATTTAAACAGGGAAACAAGGATTTAATGC TTAGATTTGCGGCATGTTTTGGACAATTTATGATGAAAAAGGATATGTACATACTTCCAAAACATTTGCCTTTAAAATTA TATGAGCTCAGCACATACAGTTTTAGATATGAACAAAGAGGGGAGCTCGTAGGATTAAAAAGGCTTAGGGGCTTCACCAT GCCAGATATGCATACTGTTTGTAAAGATACCAAACAGACAATAGAGGAATTTGAAAATCAATTCTGGATGTGCTTAAAAA CAGGAGATGACCTTAATACGCCATATTCTACAATATTTAGATTTACAGAGGATTTCTTTGAAGAAAATAAAGAATGGTTC TTTAAAGTGGCAAAAGAATATAAAGAAAAATATGGAAAAGATGTAATTCTTGAATTGATTCCAGAAAGAAAACACTACTG GGTAGGAAAAGTAGATATGGCTGTTATAGATAGCTTTGGAAGACCTATTGAAAATCCAACTGTTCAAATTGATGTTGAAA GTGCAAAAAGATTCAATATAGTTGTGCATGATGGAAATGAAAAAACCTATCCAGTCATACTTCACTGTTCCCCAACTGGA AGTATAGAAAGAGTATTATGCGGACTTTTGGAAAAGGCTTCATTAGATGCAGATGCAGGAGCTCCACCAATGTTGCCAGT TTGGTTATCCCCAATACAGGCAAGAGTAATACCTGTGGCTGATGCACATTCTGAATATGCCCTATCAGTTGCCAAAAAAC TAAGAGAAAACGGAATAAGAGCAGACTTTGACGATAGAGAAGAAAGTGTCGGTAAAAAAATAAGAAATGCTGGTAAGGAC TGGGTGCCATTTGTTATAGTTATAGGGGATAAAGAGGTTGAGAATAATATATTAACAACCACAATAAGAGAAAAATCCAC ATTAAAAAAGCCAGTTAAGGAAAATTTGACTGTTGAAGAGTTAATCGAAAAAATAAAAGAAGAAACCAAAGGATTCCCAT ACAGGCCATTAAGTTTGCCTTTATATTGCTCATTACAGCCAATATTTAGATAA
Upstream 100 bases:
>100_bases TAAATAATTTAAAGTTTATAAAGTTTATATAATTGAAACGCATATATTTTTAAAATAACTATAATTTTATAACCATGACA AATTTTATAAGAGGGATAAT
Downstream 100 bases:
>100_bases AATATTTAAATAAGTATAATATCAAATCAATTCTATTTCTTACTTTTAATTTCTTACTTTTGTTTTTAATTTTTTAATTA ATTATTTCCCCATATAAACC
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MKVLLIHSDYLEFEAKQKTKIAEDTDILNGKMEECLTVFMAVEKEDEENPQNVIYNTVDEIIKTAENLKINNVVVYPYAH LSSELSSPKVAKEVLQKIEEELKQKNYSVLRAPFGWYKSFKISCKGHPLSELSRKITTERKEEKGETEAKDRPKNKFYIL DGEKGEEGLKELDEKKVKKLKDKGLKSVAMHEMGIKHGGKEKDIEPPHVKFITEKEICDYEPSSDAGHFRWYPKGKLIRD LLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGNKDLMLRFAACFGQFMMKKDMYILPKHLPLKL YELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCKDTKQTIEEFENQFWMCLKTGDDLNTPYSTIFRFTEDFFEENKEWF FKVAKEYKEKYGKDVILELIPERKHYWVGKVDMAVIDSFGRPIENPTVQIDVESAKRFNIVVHDGNEKTYPVILHCSPTG SIERVLCGLLEKASLDADAGAPPMLPVWLSPIQARVIPVADAHSEYALSVAKKLRENGIRADFDDREESVGKKIRNAGKD WVPFVIVIGDKEVENNILTTTIREKSTLKKPVKENLTVEELIEKIKEETKGFPYRPLSLPLYCSLQPIFR
Sequences:
>Translated_630_residues MKVLLIHSDYLEFEAKQKTKIAEDTDILNGKMEECLTVFMAVEKEDEENPQNVIYNTVDEIIKTAENLKINNVVVYPYAH LSSELSSPKVAKEVLQKIEEELKQKNYSVLRAPFGWYKSFKISCKGHPLSELSRKITTERKEEKGETEAKDRPKNKFYIL DGEKGEEGLKELDEKKVKKLKDKGLKSVAMHEMGIKHGGKEKDIEPPHVKFITEKEICDYEPSSDAGHFRWYPKGKLIRD LLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGNKDLMLRFAACFGQFMMKKDMYILPKHLPLKL YELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCKDTKQTIEEFENQFWMCLKTGDDLNTPYSTIFRFTEDFFEENKEWF FKVAKEYKEKYGKDVILELIPERKHYWVGKVDMAVIDSFGRPIENPTVQIDVESAKRFNIVVHDGNEKTYPVILHCSPTG SIERVLCGLLEKASLDADAGAPPMLPVWLSPIQARVIPVADAHSEYALSVAKKLRENGIRADFDDREESVGKKIRNAGKD WVPFVIVIGDKEVENNILTTTIREKSTLKKPVKENLTVEELIEKIKEETKGFPYRPLSLPLYCSLQPIFR >Mature_630_residues MKVLLIHSDYLEFEAKQKTKIAEDTDILNGKMEECLTVFMAVEKEDEENPQNVIYNTVDEIIKTAENLKINNVVVYPYAH LSSELSSPKVAKEVLQKIEEELKQKNYSVLRAPFGWYKSFKISCKGHPLSELSRKITTERKEEKGETEAKDRPKNKFYIL DGEKGEEGLKELDEKKVKKLKDKGLKSVAMHEMGIKHGGKEKDIEPPHVKFITEKEICDYEPSSDAGHFRWYPKGKLIRD LLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGNKDLMLRFAACFGQFMMKKDMYILPKHLPLKL YELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCKDTKQTIEEFENQFWMCLKTGDDLNTPYSTIFRFTEDFFEENKEWF FKVAKEYKEKYGKDVILELIPERKHYWVGKVDMAVIDSFGRPIENPTVQIDVESAKRFNIVVHDGNEKTYPVILHCSPTG SIERVLCGLLEKASLDADAGAPPMLPVWLSPIQARVIPVADAHSEYALSVAKKLRENGIRADFDDREESVGKKIRNAGKD WVPFVIVIGDKEVENNILTTTIREKSTLKKPVKENLTVEELIEKIKEETKGFPYRPLSLPLYCSLQPIFR
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI38570111, Length=416, Percent_Identity=27.8846153846154, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI38202255, Length=418, Percent_Identity=27.7511961722488, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI20070344, Length=411, Percent_Identity=24.5742092457421, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1788013, Length=406, Percent_Identity=26.3546798029557, Blast_Score=124, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71984192, Length=410, Percent_Identity=25.8536585365854, Blast_Score=122, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71984184, Length=410, Percent_Identity=25.8536585365854, Blast_Score=121, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6322112, Length=441, Percent_Identity=26.0770975056689, Blast_Score=106, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6322654, Length=327, Percent_Identity=28.7461773700306, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24583842, Length=408, Percent_Identity=26.4705882352941, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI28574141, Length=408, Percent_Identity=26.4705882352941, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24583839, Length=409, Percent_Identity=26.4058679706601, Blast_Score=129, Evalue=7e-30,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYT_META3 (A6UW94)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325378.1 - ProteinModelPortal: A6UW94 - SMR: A6UW94 - STRING: A6UW94 - GeneID: 5327250 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1189 - eggNOG: arNOG04477 - HOGENOM: HBG392335 - OMA: ETPVMYD - ProtClustDB: PRK03991 - BioCyc: MAEO419665:MAEO_1189-MONOMER - GO: GO:0005737 - HAMAP: MF_00184_A - InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR015011 - Gene3D: G3DSA:3.40.50.800 - PRINTS: PR01047 - ProDom: PD016189 - TIGRFAMs: TIGR00418
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF08915 tRNA-Thr_ED; SSF52954 Anticodon_bd
EC number: =6.1.1.3
Molecular weight: Translated: 72954; Mature: 72954
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLIHSDYLEFEAKQKTKIAEDTDILNGKMEECLTVFMAVEKEDEENPQNVIYNTVDE CEEEEEECCHHHHCCHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IIKTAENLKINNVVVYPYAHLSSELSSPKVAKEVLQKIEEELKQKNYSVLRAPFGWYKSF HHHHHHCCEECCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCE KISCKGHPLSELSRKITTERKEEKGETEAKDRPKNKFYILDGEKGEEGLKELDEKKVKKL EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH KDKGLKSVAMHEMGIKHGGKEKDIEPPHVKFITEKEICDYEPSSDAGHFRWYPKGKLIRD HHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHH LLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGNKDLMLRFAACF HHHHHHHHEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GQFMMKKDMYILPKHLPLKLYELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCKDTKQT HHHHHHCCCEECCCCCCEEEEEECEEEEEHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHH IEEFENQFWMCLKTGDDLNTPYSTIFRFTEDFFEENKEWFFKVAKEYKEKYGKDVILELI HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHC PERKHYWVGKVDMAVIDSFGRPIENPTVQIDVESAKRFNIVVHDGNEKTYPVILHCSPTG CCCCCEEECCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCC SIERVLCGLLEKASLDADAGAPPMLPVWLSPIQARVIPVADAHSEYALSVAKKLRENGIR CHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHEEEEEECCCCHHHHHHHHHHHHHCCCC ADFDDREESVGKKIRNAGKDWVPFVIVIGDKEVENNILTTTIREKSTLKKPVKENLTVEE CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHCCCEEEEEHHHHHHHHHHHHHCCCHHH LIEKIKEETKGFPYRPLSLPLYCSLQPIFR HHHHHHHHHCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKVLLIHSDYLEFEAKQKTKIAEDTDILNGKMEECLTVFMAVEKEDEENPQNVIYNTVDE CEEEEEECCHHHHCCHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IIKTAENLKINNVVVYPYAHLSSELSSPKVAKEVLQKIEEELKQKNYSVLRAPFGWYKSF HHHHHHCCEECCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCE KISCKGHPLSELSRKITTERKEEKGETEAKDRPKNKFYILDGEKGEEGLKELDEKKVKKL EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH KDKGLKSVAMHEMGIKHGGKEKDIEPPHVKFITEKEICDYEPSSDAGHFRWYPKGKLIRD HHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHH LLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGNKDLMLRFAACF HHHHHHHHEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GQFMMKKDMYILPKHLPLKLYELSTYSFRYEQRGELVGLKRLRGFTMPDMHTVCKDTKQT HHHHHHCCCEECCCCCCEEEEEECEEEEEHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHH IEEFENQFWMCLKTGDDLNTPYSTIFRFTEDFFEENKEWFFKVAKEYKEKYGKDVILELI HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHC PERKHYWVGKVDMAVIDSFGRPIENPTVQIDVESAKRFNIVVHDGNEKTYPVILHCSPTG CCCCCEEECCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCC SIERVLCGLLEKASLDADAGAPPMLPVWLSPIQARVIPVADAHSEYALSVAKKLRENGIR CHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHEEEEEECCCCHHHHHHHHHHHHHCCCC ADFDDREESVGKKIRNAGKDWVPFVIVIGDKEVENNILTTTIREKSTLKKPVKENLTVEE CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHCCCEEEEEHHHHHHHHHHHHHCCCHHH LIEKIKEETKGFPYRPLSLPLYCSLQPIFR HHHHHHHHHCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA