| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is cdhA [H]
Identifier: 150401597
GI number: 150401597
Start: 1238421
End: 1240781
Strand: Reverse
Name: cdhA [H]
Synonym: Maeo_1174
Alternate gene names: 150401597
Gene position: 1240781-1238421 (Counterclockwise)
Preceding gene: 150401604
Following gene: 150401596
Centisome position: 79.06
GC content: 35.54
Gene sequence:
>2361_bases ATGAATATAGAAGGAGACCTAAAAAAAGTTTTATCGCCACTGGTAAAATCTAAAAACCTGAAATTTTCAGGCAATATTGT AATAGGCGGCAATTCCACGACCGACAATCACGATGATGATTGGAGTGAAAAGATGGGGCCATCCCCTAAGCCAAAAATTC CAACACTTAGAAACTGGGATTTCAAATTATTAAAAAGATATCCTCCATTTTACATGCCAATTTGTGATATGTGTTGTCTA TGTACATTCGGAAAATGTGATTTATCCCATGGTAAAAAAGGTGCTTGTGGATTAAATATAAAATCCCAACAGGCCAGAAT AGTATTAATAGCTTGCTGTATTGGAACATCGTGCCACGCTGGGCACAGTAGGCATATGATACATACGCTAATAGAAAGGC TTGGAAAAGATTATCCTATTGATTTAGGCAATTTTATAGAAGTAGAAGCCCCAATAATTAGGACCATTATGGGCATGAAA CCGAAGACACTTGGAGATTTGGAGAAAGTATTGGAATATTGTGAGGAACAAATTTCCCATTTATTATCTTCCACACATAC TGGACAGGAAGGTAGCCATATTGATTTTGAAAGTAAATCATTCCATGCTGGTATGATTGATGATTTAGCCAGAGAAGCAG GAGACCTTGCCCAAATTGTTGGATTTAATCTACCAAAAGGAGACATTGATGCTCCATTGGTTGAATTAGGTATGAAATGT GTAGACCCAAACAAACCCAACATATTATGTATTGGACATAATATGGTTCCAGGTGTAGCCATGATTGATTATATGGAGGA ACAGGGGATAGAGGATGAAATAGAAATAGCAGGAATTTGCTGTTCTGCCATAGATATTAGTAGATATACCACAAAATCAA AAGTTATAGGCCCTCTTTCAAGACAGTTAATGTATATCAGAGGAGGAATCGGAGATGTTGTTGTAATTGATGAACAATGT ATAAGAACAGATATTCTTGAAGAAACTCTAAAAACGGGTGCTGTTTTAATAGCCACAAATGAAAAAATGTGTTTAGGATT AGAGGATATATCTCATTTAAGCGAAGATGAAATGATAAATTATATATTAAGAAATAGAAGTGCCTTAATTCTTGATGAAG TAAAAGTAGGTAAAGTAGCCGTTGAATTGGCAAAAATTGTATCAAAGGAAAGAAAAAATAAAGACAATAATGATAAAAAT AGATACAATAAATGTTTGCCAAATTCATTGACGGAGCTCCGAAAACTTGCCGAAGAATGTACTGAATGTGGATGGTGTGA TAGGTCCTGTCCAAATTCATTTAAAGTTATGGACTCAATGATAGGGGCAAAAAATGAAGATTATACTGAATTTAGGAAAT TATATGAGGTATGTTATGGATGTGGAAGATGTGAGGAAATATGTGAAAGAAATATTCCCATCGTTTCCATGACAACAAAA ATAGGAGACCACTTCTGTGACGATTTACACTATAATATGAGAGCTGGAAGAGGCCCTATTCAAGATATTGAAATAAGAAA TGTGGGAGCTCCTATTGTATTTGGAGATATCCCTGGAATTGTAGCATTAGTGGGATGTTCCAATTACCCCAATGGAGATG AGGAAATTGCCCTTATTGTAAAAGAATTTTTAGAAAGGAAATATATTGTGCTTATATCTGGTTGTGCTGCCATGTCCGTC GGAATGTGGAAAGATAAAGACGGTAAAACACTTTATGAGAAATACCCTGGTGAATTTAAATCTGGAGGATTGGTAAATGT AGGAAGTTGTTTAAGTAATTGCCATATTACAGGAGCTTGTATTAAAGTGGCAAATGTGTTTGCAAAACTCCCATTAAGAG GAAACTACGAGGAAGTTGCCGACTATATATTAAATAAAGTTGGAGCTGTTGGTTTAGCATGGGGAGCAATGTCTCAAAAA GCCGCCGCAATTGCAACAGGAGTGAATAGATGGGGAATTCCCGTAATAGTTGGGCCACATTCAACTAAATACAGAAGAAT GTATTTAAGTGATGGAAATGATTTTGAGGTATTTGACAAAAAGGCAAACAAAATTATAAAAATAGACCCTACGCCAGAAC ACCTAATAACCCCCGCGGAAAACTTAGCCGAGTGCATGTGTGCAATTCCTAAATTGTGCATGCGACCAAATGATGGAGCA AAAGGTAGGAGTATGAAGTTATATCATTATATAAGCGTTTATGAGAAATACCTCGGTTGTATGCCTCCAGATTTAGAAAA ATTCGTTAGAACTGAAAAGGATATCCCACTTATGATGAAAAATAAAGTATTAGAATATCTAAAAGAAAAAGGATGGAAAC CTAGAGAAGAACTACCAAAAGAACCTACCTTATTATATTAA
Upstream 100 bases:
>100_bases TATTAGTATAAATGCCTATTTTTGTAGTGTATGTTTATATATTCCTAAATCAAACGCAGTGATTTTTAAAAATTATACTT TCATAATATATGGTGAAATT
Downstream 100 bases:
>100_bases ATTAATTTTATCTTTATTTTATATTATTATTTTATTTTTTATTTACTTAATATCATTTGGTGAAATTATGATAGGAAAGA CTACACCATATCAGCCAACA
Product: acetyl-CoA decarbonylase/synthase complex subunit alpha
Products: NA
Alternate protein names: ACDS complex subunit alpha; ACDS complex carbon monoxide dehydrogenase; ACDS CODH [H]
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MNIEGDLKKVLSPLVKSKNLKFSGNIVIGGNSTTDNHDDDWSEKMGPSPKPKIPTLRNWDFKLLKRYPPFYMPICDMCCL CTFGKCDLSHGKKGACGLNIKSQQARIVLIACCIGTSCHAGHSRHMIHTLIERLGKDYPIDLGNFIEVEAPIIRTIMGMK PKTLGDLEKVLEYCEEQISHLLSSTHTGQEGSHIDFESKSFHAGMIDDLAREAGDLAQIVGFNLPKGDIDAPLVELGMKC VDPNKPNILCIGHNMVPGVAMIDYMEEQGIEDEIEIAGICCSAIDISRYTTKSKVIGPLSRQLMYIRGGIGDVVVIDEQC IRTDILEETLKTGAVLIATNEKMCLGLEDISHLSEDEMINYILRNRSALILDEVKVGKVAVELAKIVSKERKNKDNNDKN RYNKCLPNSLTELRKLAEECTECGWCDRSCPNSFKVMDSMIGAKNEDYTEFRKLYEVCYGCGRCEEICERNIPIVSMTTK IGDHFCDDLHYNMRAGRGPIQDIEIRNVGAPIVFGDIPGIVALVGCSNYPNGDEEIALIVKEFLERKYIVLISGCAAMSV GMWKDKDGKTLYEKYPGEFKSGGLVNVGSCLSNCHITGACIKVANVFAKLPLRGNYEEVADYILNKVGAVGLAWGAMSQK AAAIATGVNRWGIPVIVGPHSTKYRRMYLSDGNDFEVFDKKANKIIKIDPTPEHLITPAENLAECMCAIPKLCMRPNDGA KGRSMKLYHYISVYEKYLGCMPPDLEKFVRTEKDIPLMMKNKVLEYLKEKGWKPREELPKEPTLLY
Sequences:
>Translated_786_residues MNIEGDLKKVLSPLVKSKNLKFSGNIVIGGNSTTDNHDDDWSEKMGPSPKPKIPTLRNWDFKLLKRYPPFYMPICDMCCL CTFGKCDLSHGKKGACGLNIKSQQARIVLIACCIGTSCHAGHSRHMIHTLIERLGKDYPIDLGNFIEVEAPIIRTIMGMK PKTLGDLEKVLEYCEEQISHLLSSTHTGQEGSHIDFESKSFHAGMIDDLAREAGDLAQIVGFNLPKGDIDAPLVELGMKC VDPNKPNILCIGHNMVPGVAMIDYMEEQGIEDEIEIAGICCSAIDISRYTTKSKVIGPLSRQLMYIRGGIGDVVVIDEQC IRTDILEETLKTGAVLIATNEKMCLGLEDISHLSEDEMINYILRNRSALILDEVKVGKVAVELAKIVSKERKNKDNNDKN RYNKCLPNSLTELRKLAEECTECGWCDRSCPNSFKVMDSMIGAKNEDYTEFRKLYEVCYGCGRCEEICERNIPIVSMTTK IGDHFCDDLHYNMRAGRGPIQDIEIRNVGAPIVFGDIPGIVALVGCSNYPNGDEEIALIVKEFLERKYIVLISGCAAMSV GMWKDKDGKTLYEKYPGEFKSGGLVNVGSCLSNCHITGACIKVANVFAKLPLRGNYEEVADYILNKVGAVGLAWGAMSQK AAAIATGVNRWGIPVIVGPHSTKYRRMYLSDGNDFEVFDKKANKIIKIDPTPEHLITPAENLAECMCAIPKLCMRPNDGA KGRSMKLYHYISVYEKYLGCMPPDLEKFVRTEKDIPLMMKNKVLEYLKEKGWKPREELPKEPTLLY >Mature_786_residues MNIEGDLKKVLSPLVKSKNLKFSGNIVIGGNSTTDNHDDDWSEKMGPSPKPKIPTLRNWDFKLLKRYPPFYMPICDMCCL CTFGKCDLSHGKKGACGLNIKSQQARIVLIACCIGTSCHAGHSRHMIHTLIERLGKDYPIDLGNFIEVEAPIIRTIMGMK PKTLGDLEKVLEYCEEQISHLLSSTHTGQEGSHIDFESKSFHAGMIDDLAREAGDLAQIVGFNLPKGDIDAPLVELGMKC VDPNKPNILCIGHNMVPGVAMIDYMEEQGIEDEIEIAGICCSAIDISRYTTKSKVIGPLSRQLMYIRGGIGDVVVIDEQC IRTDILEETLKTGAVLIATNEKMCLGLEDISHLSEDEMINYILRNRSALILDEVKVGKVAVELAKIVSKERKNKDNNDKN RYNKCLPNSLTELRKLAEECTECGWCDRSCPNSFKVMDSMIGAKNEDYTEFRKLYEVCYGCGRCEEICERNIPIVSMTTK IGDHFCDDLHYNMRAGRGPIQDIEIRNVGAPIVFGDIPGIVALVGCSNYPNGDEEIALIVKEFLERKYIVLISGCAAMSV GMWKDKDGKTLYEKYPGEFKSGGLVNVGSCLSNCHITGACIKVANVFAKLPLRGNYEEVADYILNKVGAVGLAWGAMSQK AAAIATGVNRWGIPVIVGPHSTKYRRMYLSDGNDFEVFDKKANKIIKIDPTPEHLITPAENLAECMCAIPKLCMRPNDGA KGRSMKLYHYISVYEKYLGCMPPDLEKFVRTEKDIPLMMKNKVLEYLKEKGWKPREELPKEPTLLY
Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]
COG id: COG1152
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004460 - InterPro: IPR012285 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 87580; Mature: 87580
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEGDLKKVLSPLVKSKNLKFSGNIVIGGNSTTDNHDDDWSEKMGPSPKPKIPTLRNWD CCCCHHHHHHHHHHHHCCCCEEECCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC FKLLKRYPPFYMPICDMCCLCTFGKCDLSHGKKGACGLNIKSQQARIVLIACCIGTSCHA HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC GHSRHMIHTLIERLGKDYPIDLGNFIEVEAPIIRTIMGMKPKTLGDLEKVLEYCEEQISH CCHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLSSTHTGQEGSHIDFESKSFHAGMIDDLAREAGDLAQIVGFNLPKGDIDAPLVELGMKC HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEE VDPNKPNILCIGHNMVPGVAMIDYMEEQGIEDEIEIAGICCSAIDISRYTTKSKVIGPLS CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLMYIRGGIGDVVVIDEQCIRTDILEETLKTGAVLIATNEKMCLGLEDISHLSEDEMIN HHHHHEECCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHCCHHHHHH YILRNRSALILDEVKVGKVAVELAKIVSKERKNKDNNDKNRYNKCLPNSLTELRKLAEEC HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHH TECGWCDRSCPNSFKVMDSMIGAKNEDYTEFRKLYEVCYGCGRCEEICERNIPIVSMTTK HHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHH IGDHFCDDLHYNMRAGRGPIQDIEIRNVGAPIVFGDIPGIVALVGCSNYPNGDEEIALIV HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCHHHEEEECCCCCCCHHHHHHHH KEFLERKYIVLISGCAAMSVGMWKDKDGKTLYEKYPGEFKSGGLVNVGSCLSNCHITGAC HHHHCCCEEEEEECHHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHCCCCHHHH IKVANVFAKLPLRGNYEEVADYILNKVGAVGLAWGAMSQKAAAIATGVNRWGIPVIVGPH HHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC STKYRRMYLSDGNDFEVFDKKANKIIKIDPTPEHLITPAENLAECMCAIPKLCMRPNDGA CCCEEEEEECCCCCCHHHHHCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCC KGRSMKLYHYISVYEKYLGCMPPDLEKFVRTEKDIPLMMKNKVLEYLKEKGWKPREELPK CCCCEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHCCC EPTLLY CCCCCC >Mature Secondary Structure MNIEGDLKKVLSPLVKSKNLKFSGNIVIGGNSTTDNHDDDWSEKMGPSPKPKIPTLRNWD CCCCHHHHHHHHHHHHCCCCEEECCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC FKLLKRYPPFYMPICDMCCLCTFGKCDLSHGKKGACGLNIKSQQARIVLIACCIGTSCHA HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC GHSRHMIHTLIERLGKDYPIDLGNFIEVEAPIIRTIMGMKPKTLGDLEKVLEYCEEQISH CCHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLSSTHTGQEGSHIDFESKSFHAGMIDDLAREAGDLAQIVGFNLPKGDIDAPLVELGMKC HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEE VDPNKPNILCIGHNMVPGVAMIDYMEEQGIEDEIEIAGICCSAIDISRYTTKSKVIGPLS CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLMYIRGGIGDVVVIDEQCIRTDILEETLKTGAVLIATNEKMCLGLEDISHLSEDEMIN HHHHHEECCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHCCHHHHHH YILRNRSALILDEVKVGKVAVELAKIVSKERKNKDNNDKNRYNKCLPNSLTELRKLAEEC HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHH TECGWCDRSCPNSFKVMDSMIGAKNEDYTEFRKLYEVCYGCGRCEEICERNIPIVSMTTK HHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHH IGDHFCDDLHYNMRAGRGPIQDIEIRNVGAPIVFGDIPGIVALVGCSNYPNGDEEIALIV HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCHHHEEEECCCCCCCHHHHHHHH KEFLERKYIVLISGCAAMSVGMWKDKDGKTLYEKYPGEFKSGGLVNVGSCLSNCHITGAC HHHHCCCEEEEEECHHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHCCCCHHHH IKVANVFAKLPLRGNYEEVADYILNKVGAVGLAWGAMSQKAAAIATGVNRWGIPVIVGPH HHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC STKYRRMYLSDGNDFEVFDKKANKIIKIDPTPEHLITPAENLAECMCAIPKLCMRPNDGA CCCEEEEEECCCCCCHHHHHCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCC KGRSMKLYHYISVYEKYLGCMPPDLEKFVRTEKDIPLMMKNKVLEYLKEKGWKPREELPK CCCCEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHCCC EPTLLY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]