| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is gltX
Identifier: 150401533
GI number: 150401533
Start: 1155121
End: 1156806
Strand: Direct
Name: gltX
Synonym: Maeo_1110
Alternate gene names: 150401533
Gene position: 1155121-1156806 (Clockwise)
Preceding gene: 150401532
Following gene: 150401534
Centisome position: 73.6
GC content: 32.15
Gene sequence:
>1686_bases TTGAGCGACATACGAGACACAATTTTAAAATATGTTCTTCAAAATTCAATAAAATTTAAAGGAGCTCCCAACCCAAAGGC AATCATGGGAAAAATATTGGGAGAAAATCCAGATTTAAGAAAAAAGGCAGGGGAAGTTTCAAAAATAATTGCAGAAATAA TAAAAGAAATAGAAAATATGCCACTAAATGAACAACAGGCAAAATTAGAATCCCTTGCCCCAGAATTATTAAACAGCAAA CCAGCAGAAAGAAAAAAGAAAGAGCTACAATTAAAAAATGTAAAAGAGGGAGCTCCTGTTGTAATGAGATTTGCACCAAA TCCATCTGGACCACTTCATTTGGGACATGCCAGAGCTGCTGTATTAAATGATTATTTTGCAAAAAAATATAATGGAAAAT TAATTTTAAGGTTGGAGGACACAGACCCAAAAAGAGTAATGCCTGAAGCTTATGAAATGATTAAAGAGGATTTAGAATGG CTTGGAGTAAAAATAGATGATGTAATTGTTCAATCCGATAGATTACCCATTTATTACGAATATGGAACAAAATTAATAGA AATGGGGCATGCCTATGTTTGTGATTGTGAGGCAGAAGAATTCAGGGAGCTCCGAGCTAATGGAAAACCATGTGTATGTA GGGATTTAGGAGTGGAGAAAAATTTAGAACTATGGAATAAAATGCTAAATAATGAAATAGATGGAGTTGCAGTCAGGTTA AAAACAGACATAGAGCATAAAAACCCATCAATAAGAGATTTTCCTATATTTAGAATTGAAAACACACCCCACCCAAAAAC AGGCACAAAATACAGAGTTTATCCACTAATGAACCTGTCCGTATCTGTTGATGACCATCTTTTAGGTATGACCCATGTAT TGAGGGGAAAAGACCATATAGTAAATACGGAAAAACAAAAATACATATTTGATTACTTTGGCTGGGAAATGCCCGAATAT ATACATTATGGTATTTTAAAAATAGATGGACCGATTTTAAGCACATCAAAAATGAGCGAAGGAATTAAAAACAATGAATT CACAGGTTGGGACGACCCTAGATTTGGAACGCTAAGGGCATTGAAAAGAAGAGGAATAAAACCAGAGGCAATTTATAAAT CAATGGTAGATATTGGAGTAAAACAGGCAGATGTAAAATACTCATGGGAAAACTTACATGCTGTAAATAAAGATATAATT GATAAAGATGCTCGACGGTTCTTCTTTGTAGAAAATCCAAAAACTTTAATAATCGAGGGAGCAAAAATCACTACGATAAA TTTAAGAGCTCACCCAAGTAGGGAAGAATTTGGAACAAGAGAATTAATATTTGATGGAAATATTTATATTTCCGATGATT TGGAAGTAAATAAAATGTATAGATTGATGGAGCTCCATAATATTGTAGTTGAAAAAATAGAAAATAACACAATATATGCC AAATACCACTCCGATGACTTCAAAATAGCAAAAGAAAATAAAGCAAAAATAATACATTGGATTCCTGTAAAAGATGCCAT TCCTACTACCGTAATAAATACAGAGGGAGAAAAAATTAAAGGATTTGCTGAAAAAGACTTTAAAATAGTAAATATTGATG ATTTTGTGCAATTTGAAAGATTTGGATTTGTAAGAATAGATGAAAAGAAAGATGATGAAATAATTTGTTATTATACCCAT AATTAA
Upstream 100 bases:
>100_bases TTTTTACGATTTTACGATTATTTTAATTATTAATTATATATATTATTTAATCATACTTTTTTAACATAAAAAAACTTTTT AAAAATTATCAGGTGAAAAA
Downstream 100 bases:
>100_bases TTTTTATTATGGGAGCTCCTTTTATGACTTTTTTTATATATTGTTATACAATATTTTATTAATAATATTTTATTACGATA TTATCTATTTTAGGGGGATA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MSDIRDTILKYVLQNSIKFKGAPNPKAIMGKILGENPDLRKKAGEVSKIIAEIIKEIENMPLNEQQAKLESLAPELLNSK PAERKKKELQLKNVKEGAPVVMRFAPNPSGPLHLGHARAAVLNDYFAKKYNGKLILRLEDTDPKRVMPEAYEMIKEDLEW LGVKIDDVIVQSDRLPIYYEYGTKLIEMGHAYVCDCEAEEFRELRANGKPCVCRDLGVEKNLELWNKMLNNEIDGVAVRL KTDIEHKNPSIRDFPIFRIENTPHPKTGTKYRVYPLMNLSVSVDDHLLGMTHVLRGKDHIVNTEKQKYIFDYFGWEMPEY IHYGILKIDGPILSTSKMSEGIKNNEFTGWDDPRFGTLRALKRRGIKPEAIYKSMVDIGVKQADVKYSWENLHAVNKDII DKDARRFFFVENPKTLIIEGAKITTINLRAHPSREEFGTRELIFDGNIYISDDLEVNKMYRLMELHNIVVEKIENNTIYA KYHSDDFKIAKENKAKIIHWIPVKDAIPTTVINTEGEKIKGFAEKDFKIVNIDDFVQFERFGFVRIDEKKDDEIICYYTH N
Sequences:
>Translated_561_residues MSDIRDTILKYVLQNSIKFKGAPNPKAIMGKILGENPDLRKKAGEVSKIIAEIIKEIENMPLNEQQAKLESLAPELLNSK PAERKKKELQLKNVKEGAPVVMRFAPNPSGPLHLGHARAAVLNDYFAKKYNGKLILRLEDTDPKRVMPEAYEMIKEDLEW LGVKIDDVIVQSDRLPIYYEYGTKLIEMGHAYVCDCEAEEFRELRANGKPCVCRDLGVEKNLELWNKMLNNEIDGVAVRL KTDIEHKNPSIRDFPIFRIENTPHPKTGTKYRVYPLMNLSVSVDDHLLGMTHVLRGKDHIVNTEKQKYIFDYFGWEMPEY IHYGILKIDGPILSTSKMSEGIKNNEFTGWDDPRFGTLRALKRRGIKPEAIYKSMVDIGVKQADVKYSWENLHAVNKDII DKDARRFFFVENPKTLIIEGAKITTINLRAHPSREEFGTRELIFDGNIYISDDLEVNKMYRLMELHNIVVEKIENNTIYA KYHSDDFKIAKENKAKIIHWIPVKDAIPTTVINTEGEKIKGFAEKDFKIVNIDDFVQFERFGFVRIDEKKDDEIICYYTH N >Mature_560_residues SDIRDTILKYVLQNSIKFKGAPNPKAIMGKILGENPDLRKKAGEVSKIIAEIIKEIENMPLNEQQAKLESLAPELLNSKP AERKKKELQLKNVKEGAPVVMRFAPNPSGPLHLGHARAAVLNDYFAKKYNGKLILRLEDTDPKRVMPEAYEMIKEDLEWL GVKIDDVIVQSDRLPIYYEYGTKLIEMGHAYVCDCEAEEFRELRANGKPCVCRDLGVEKNLELWNKMLNNEIDGVAVRLK TDIEHKNPSIRDFPIFRIENTPHPKTGTKYRVYPLMNLSVSVDDHLLGMTHVLRGKDHIVNTEKQKYIFDYFGWEMPEYI HYGILKIDGPILSTSKMSEGIKNNEFTGWDDPRFGTLRALKRRGIKPEAIYKSMVDIGVKQADVKYSWENLHAVNKDIID KDARRFFFVENPKTLIIEGAKITTINLRAHPSREEFGTRELIFDGNIYISDDLEVNKMYRLMELHNIVVEKIENNTIYAK YHSDDFKIAKENKAKIIHWIPVKDAIPTTVINTEGEKIKGFAEKDFKIVNIDDFVQFERFGFVRIDEKKDDEIICYYTHN
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI62241042, Length=430, Percent_Identity=30.2325581395349, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4826960, Length=357, Percent_Identity=29.4117647058824, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI134288884, Length=286, Percent_Identity=32.8671328671329, Blast_Score=138, Evalue=2e-32, Organism=Escherichia coli, GI1786895, Length=506, Percent_Identity=30.4347826086957, Blast_Score=198, Evalue=6e-52, Organism=Escherichia coli, GI1788743, Length=311, Percent_Identity=28.9389067524116, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI226510925, Length=297, Percent_Identity=30.6397306397306, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17511007, Length=353, Percent_Identity=32.0113314447592, Blast_Score=202, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17543332, Length=335, Percent_Identity=29.8507462686567, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71993394, Length=312, Percent_Identity=27.5641025641026, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321192, Length=508, Percent_Identity=30.3149606299213, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6324742, Length=444, Percent_Identity=29.954954954955, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6324540, Length=301, Percent_Identity=32.5581395348837, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24649466, Length=535, Percent_Identity=29.9065420560748, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI17864488, Length=512, Percent_Identity=27.1484375, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24665321, Length=303, Percent_Identity=30.3630363036304, Blast_Score=128, Evalue=1e-29,
Paralogues:
None
Copy number: 520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1200 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_META3 (A6UW15)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325299.1 - ProteinModelPortal: A6UW15 - SMR: A6UW15 - STRING: A6UW15 - GeneID: 5326562 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1110 - eggNOG: arNOG04636 - HOGENOM: HBG334108 - OMA: MRFAPNP - ProtClustDB: PRK04156 - BioCyc: MAEO419665:MAEO_1110-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_A - InterPro: IPR001412 - InterPro: IPR004526 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR020059 - InterPro: IPR022888 - InterPro: IPR020056 - InterPro: IPR011035 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:2.40.240.10 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00463
Pfam domain/function: PF00749 tRNA-synt_1c; PF03950 tRNA-synt_1c_C; SSF50715 Ribosomal_L25rel
EC number: =6.1.1.17
Molecular weight: Translated: 64864; Mature: 64732
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIRDTILKYVLQNSIKFKGAPNPKAIMGKILGENPDLRKKAGEVSKIIAEIIKEIENM CCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PLNEQQAKLESLAPELLNSKPAERKKKELQLKNVKEGAPVVMRFAPNPSGPLHLGHARAA CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECHHHHH VLNDYFAKKYNGKLILRLEDTDPKRVMPEAYEMIKEDLEWLGVKIDDVIVQSDRLPIYYE HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEHEEEECCCCCEEEC YGTKLIEMGHAYVCDCEAEEFRELRANGKPCVCRDLGVEKNLELWNKMLNNEIDGVAVRL CCCHHHHCCCEEEECCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEE KTDIEHKNPSIRDFPIFRIENTPHPKTGTKYRVYPLMNLSVSVDDHLLGMTHVLRGKDHI EECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHCCCCCC VNTEKQKYIFDYFGWEMPEYIHYGILKIDGPILSTSKMSEGIKNNEFTGWDDPRFGTLRA CCCCCHHEEHHHHCCCCCHHHEEEEEEECCCEECHHHHHCCCCCCCCCCCCCCCHHHHHH LKRRGIKPEAIYKSMVDIGVKQADVKYSWENLHAVNKDIIDKDARRFFFVENPKTLIIEG HHHCCCCHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEC AKITTINLRAHPSREEFGTRELIFDGNIYISDDLEVNKMYRLMELHNIVVEKIENNTIYA CEEEEEEEEECCCHHHCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE KYHSDDFKIAKENKAKIIHWIPVKDAIPTTVINTEGEKIKGFAEKDFKIVNIDDFVQFER EEECCCCEEECCCCCEEEEEEECCCCCCCEEECCCCHHCCCCCCCCEEEEEHHHHHHHHH FGFVRIDEKKDDEIICYYTHN CCEEEECCCCCCCEEEEEECC >Mature Secondary Structure SDIRDTILKYVLQNSIKFKGAPNPKAIMGKILGENPDLRKKAGEVSKIIAEIIKEIENM CHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PLNEQQAKLESLAPELLNSKPAERKKKELQLKNVKEGAPVVMRFAPNPSGPLHLGHARAA CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECHHHHH VLNDYFAKKYNGKLILRLEDTDPKRVMPEAYEMIKEDLEWLGVKIDDVIVQSDRLPIYYE HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEHEEEECCCCCEEEC YGTKLIEMGHAYVCDCEAEEFRELRANGKPCVCRDLGVEKNLELWNKMLNNEIDGVAVRL CCCHHHHCCCEEEECCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEE KTDIEHKNPSIRDFPIFRIENTPHPKTGTKYRVYPLMNLSVSVDDHLLGMTHVLRGKDHI EECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHCCCCCC VNTEKQKYIFDYFGWEMPEYIHYGILKIDGPILSTSKMSEGIKNNEFTGWDDPRFGTLRA CCCCCHHEEHHHHCCCCCHHHEEEEEEECCCEECHHHHHCCCCCCCCCCCCCCCHHHHHH LKRRGIKPEAIYKSMVDIGVKQADVKYSWENLHAVNKDIIDKDARRFFFVENPKTLIIEG HHHCCCCHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEC AKITTINLRAHPSREEFGTRELIFDGNIYISDDLEVNKMYRLMELHNIVVEKIENNTIYA CEEEEEEEEECCCHHHCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE KYHSDDFKIAKENKAKIIHWIPVKDAIPTTVINTEGEKIKGFAEKDFKIVNIDDFVQFER EEECCCCEEECCCCCEEEEEEECCCCCCCEEECCCCHHCCCCCCCCEEEEEHHHHHHHHH FGFVRIDEKKDDEIICYYTHN CCEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA