| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401442
Identifier: 150401442
GI number: 150401442
Start: 1045227
End: 1046243
Strand: Direct
Name: 150401442
Synonym: Maeo_1018
Alternate gene names: NA
Gene position: 1045227-1046243 (Clockwise)
Preceding gene: 150401441
Following gene: 150401443
Centisome position: 66.6
GC content: 26.25
Gene sequence:
>1017_bases ATGAGAACAAAGATAAAAAAAATATTAAAAAATATATTGTTGTGGGGGTTAGGTTTTAGCATAATATTTTTAATTATTAA TTATATTGGTATTTCGGATGTAATTTCTATATTTTTATCGATTAATATAGCAATATATTTATTTGCTATTATTTTATATT TTATAATGGTATTTACAATCGTAATTCGGTGGAAATATTTACTCAATATGAATAATTATAATGCTTCGCTAAAAAATTTA TTTTTATTATCTATGATGGGACAATTTATTAATAATATTACCCCCTCTATGAAGGGGGGCAGTGAGCCATTTAGAGCACA TTATTTATCTAAATTAGAAAATATTCCAAAACATATATCCTATTCAAGTGTAGCCATTGAAAGGTTATTGGATACAATTG TATTTCTAATATTATCATTATTTTTAATTGTTTATTTTGTAAGTAATGGAATACAATATGCAAATTTTCTCATATTAATG TGGGGAATTGTTATGGGCATATCATTGCTATTGATATATTTGGCAATGCACAAATCACTGCTTTATAAATGTATCTTAAA AATATTAAAAATAGGCTCAATATTTTCAATATCTTACCATATCGACGAAGAGGGGATAAAAAAATCCATAAAATTATTTC AAGATAACATTAGATTATTTAATAAAAATAAATCAAAAATGGCAATTCCTTTTATATTATCTTTTATGTGGTGGATATTA GATATTATTAGAGTATATATATTATTTATTGCAATAAAAAGTAATATTTCATATATTGGAGTAATTTCAACATATTTGGT ATCATTACTTGCTGGAATGGTGCCGACACTACCTGGTGGTTTGGGGGCTTCTGATGCCGTAATGATTGGAATGTATTCTT TATTCGAGATTCCTCAGTCGGAAGCTGCCGCAGGAGCTATATTGGATAGAAGTATATCTTATGGACTTGCCACTATTGTT GGAGCACTATCATTCAAAATAATAAAAGACAAAGCAAAAAAACTAAAAAATAAGTGA
Upstream 100 bases:
>100_bases GATATTTTAAGATACAGTAGGTCAGTAAAGAACCTTCTTTCCGAACATACCATAATTGGAATTTTTAAAAAATACCATAA ATTTACTAAATCGGGGAACT
Downstream 100 bases:
>100_bases TAATATGATGATAAATGTAACAACTGGAAGAATAATAAAATCTCTTGAAGCATTTAAAGGTTCAAAACCCATTTATGAAA AAAATGGACTATTAATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRTKIKKILKNILLWGLGFSIIFLIINYIGISDVISIFLSINIAIYLFAIILYFIMVFTIVIRWKYLLNMNNYNASLKNL FLLSMMGQFINNITPSMKGGSEPFRAHYLSKLENIPKHISYSSVAIERLLDTIVFLILSLFLIVYFVSNGIQYANFLILM WGIVMGISLLLIYLAMHKSLLYKCILKILKIGSIFSISYHIDEEGIKKSIKLFQDNIRLFNKNKSKMAIPFILSFMWWIL DIIRVYILFIAIKSNISYIGVISTYLVSLLAGMVPTLPGGLGASDAVMIGMYSLFEIPQSEAAAGAILDRSISYGLATIV GALSFKIIKDKAKKLKNK
Sequences:
>Translated_338_residues MRTKIKKILKNILLWGLGFSIIFLIINYIGISDVISIFLSINIAIYLFAIILYFIMVFTIVIRWKYLLNMNNYNASLKNL FLLSMMGQFINNITPSMKGGSEPFRAHYLSKLENIPKHISYSSVAIERLLDTIVFLILSLFLIVYFVSNGIQYANFLILM WGIVMGISLLLIYLAMHKSLLYKCILKILKIGSIFSISYHIDEEGIKKSIKLFQDNIRLFNKNKSKMAIPFILSFMWWIL DIIRVYILFIAIKSNISYIGVISTYLVSLLAGMVPTLPGGLGASDAVMIGMYSLFEIPQSEAAAGAILDRSISYGLATIV GALSFKIIKDKAKKLKNK >Mature_338_residues MRTKIKKILKNILLWGLGFSIIFLIINYIGISDVISIFLSINIAIYLFAIILYFIMVFTIVIRWKYLLNMNNYNASLKNL FLLSMMGQFINNITPSMKGGSEPFRAHYLSKLENIPKHISYSSVAIERLLDTIVFLILSLFLIVYFVSNGIQYANFLILM WGIVMGISLLLIYLAMHKSLLYKCILKILKIGSIFSISYHIDEEGIKKSIKLFQDNIRLFNKNKSKMAIPFILSFMWWIL DIIRVYILFIAIKSNISYIGVISTYLVSLLAGMVPTLPGGLGASDAVMIGMYSLFEIPQSEAAAGAILDRSISYGLATIV GALSFKIIKDKAKKLKNK
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0104 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 - InterPro: IPR005242 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 38296; Mature: 38296
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKIKKILKNILLWGLGFSIIFLIINYIGISDVISIFLSINIAIYLFAIILYFIMVFTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRWKYLLNMNNYNASLKNLFLLSMMGQFINNITPSMKGGSEPFRAHYLSKLENIPKHIS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC YSSVAIERLLDTIVFLILSLFLIVYFVSNGIQYANFLILMWGIVMGISLLLIYLAMHKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYKCILKILKIGSIFSISYHIDEEGIKKSIKLFQDNIRLFNKNKSKMAIPFILSFMWWIL HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DIIRVYILFIAIKSNISYIGVISTYLVSLLAGMVPTLPGGLGASDAVMIGMYSLFEIPQS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCH EAAAGAILDRSISYGLATIVGALSFKIIKDKAKKLKNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTKIKKILKNILLWGLGFSIIFLIINYIGISDVISIFLSINIAIYLFAIILYFIMVFTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRWKYLLNMNNYNASLKNLFLLSMMGQFINNITPSMKGGSEPFRAHYLSKLENIPKHIS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC YSSVAIERLLDTIVFLILSLFLIVYFVSNGIQYANFLILMWGIVMGISLLLIYLAMHKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYKCILKILKIGSIFSISYHIDEEGIKKSIKLFQDNIRLFNKNKSKMAIPFILSFMWWIL HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DIIRVYILFIAIKSNISYIGVISTYLVSLLAGMVPTLPGGLGASDAVMIGMYSLFEIPQS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCH EAAAGAILDRSISYGLATIVGALSFKIIKDKAKKLKNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]