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The map label for this gene is secD [C]

Identifier: 150401441

GI number: 150401441

Start: 1043788

End: 1044963

Strand: Direct

Name: secD [C]

Synonym: Maeo_1017

Alternate gene names: 150401441

Gene position: 1043788-1044963 (Clockwise)

Preceding gene: 150401440

Following gene: 150401442

Centisome position: 66.5

GC content: 35.2

Gene sequence:

>1176_bases
ATGAACCTATTAAAAGATACCAAAACATTAATACTAATAGGATTTATTATCGCATCTGTGCTATTAATCGCATTTAAAGG
AGTATCTTATGGTGTTGATTTAAGCGGGGGTTCGATAATAGTTCTAAAAACAGAAAAAGTATTGTCTGAAAGCGAAATGG
CTACTACGACAGAAATATTGTCAAGTAGGTTAAATGCCAATGGTTTGAGCGATATATCTGTATATCCTCGTGGAACCAGT
GAAATAGTTGTCGAGATTCCAAAAGGCGTAGATTTAGAAAGAATAAAGCAAATATTAACTCAACAGGGAGTATTTTATGC
CAAAATAGATGGAAAAATTGCATACACTGGGCAGGATGTAGCTTATGTCCAGGAACCTGGAATGACCGGAAATGGATATG
GGGTTAATTTTAAACTTACAAATGATGGGGCCAAAAAATTCGCCGAAGTTGCATATGGAATGGGGGGAACTCCTGTTGAA
TTATATATGGATGATAAATTAATAAGTAGTCCAGTATTATCCCAGGGTCTTGCAGATGGAAACCTTCACCCCGACCAGGT
GATAACGGTGGCAGGAAGTAGCCCTACAAAAGATGACGAAAATGAAGCATGGATGATATATACATCGCTAAAATCTGGTT
CGCTCCCCGTTAAAGTTAATATAGAATATATAAGTTCGGTATCTCCAACATTAGGAGAAGAATTTATAAAAGGTTCCATA
ATAGCAGGATTATTTGCATTCCTTGCAGTTGGTGTAGTTATTGCAGTTAGGTATAAAACGCCCACAATAGTTATTCCAAT
ATTAATCACCTGTATATCTGAGGTATTAATTATTTTAGGATTTGCATCACTTATCGGGTGGAAATTAGACCTTGCGTCTA
TTGCAGGAATTGTTGCATCAGTTGGGACTGGTGTAGATGACCAAATTGTAATTACTGATGAAACCATTTCAGGAGAAAGC
AATAGAATTAAAAGAAGTATGAACAGGGCATTCTTTATTATATTCGCAGCAGCAGGAACCACAATAGCTGCAATGTTACC
ATTATTCTTTATGAGTATAGGTATGTTAAGAGGTTTTGCCATAACTACAATAGTTGGTGTTTTAATTGGTATATTTATCA
CAAGACCTGCATTTGCAAGTATGATAAAATATGTAATGAAAAAATATAATTATTAA

Upstream 100 bases:

>100_bases
AATATAATCATATCTGATAATTCGGAGCTCCATAATTGGGTTGTAGGGAGCTCCCACAATAATCAAAAAGCATCGTCGTA
TCACATTATAAAGGGATATC

Downstream 100 bases:

>100_bases
TTAATTATTTCTATTTTTTATTTTTTTTATAATATATTTATTTATATTGATGCCCCATAATAGGGAGCTCCATAAAATAA
ATTTATATAGTATGTTTAGA

Product: preprotein translocase subunit SecD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MNLLKDTKTLILIGFIIASVLLIAFKGVSYGVDLSGGSIIVLKTEKVLSESEMATTTEILSSRLNANGLSDISVYPRGTS
EIVVEIPKGVDLERIKQILTQQGVFYAKIDGKIAYTGQDVAYVQEPGMTGNGYGVNFKLTNDGAKKFAEVAYGMGGTPVE
LYMDDKLISSPVLSQGLADGNLHPDQVITVAGSSPTKDDENEAWMIYTSLKSGSLPVKVNIEYISSVSPTLGEEFIKGSI
IAGLFAFLAVGVVIAVRYKTPTIVIPILITCISEVLIILGFASLIGWKLDLASIAGIVASVGTGVDDQIVITDETISGES
NRIKRSMNRAFFIIFAAAGTTIAAMLPLFFMSIGMLRGFAITTIVGVLIGIFITRPAFASMIKYVMKKYNY

Sequences:

>Translated_391_residues
MNLLKDTKTLILIGFIIASVLLIAFKGVSYGVDLSGGSIIVLKTEKVLSESEMATTTEILSSRLNANGLSDISVYPRGTS
EIVVEIPKGVDLERIKQILTQQGVFYAKIDGKIAYTGQDVAYVQEPGMTGNGYGVNFKLTNDGAKKFAEVAYGMGGTPVE
LYMDDKLISSPVLSQGLADGNLHPDQVITVAGSSPTKDDENEAWMIYTSLKSGSLPVKVNIEYISSVSPTLGEEFIKGSI
IAGLFAFLAVGVVIAVRYKTPTIVIPILITCISEVLIILGFASLIGWKLDLASIAGIVASVGTGVDDQIVITDETISGES
NRIKRSMNRAFFIIFAAAGTTIAAMLPLFFMSIGMLRGFAITTIVGVLIGIFITRPAFASMIKYVMKKYNY
>Mature_391_residues
MNLLKDTKTLILIGFIIASVLLIAFKGVSYGVDLSGGSIIVLKTEKVLSESEMATTTEILSSRLNANGLSDISVYPRGTS
EIVVEIPKGVDLERIKQILTQQGVFYAKIDGKIAYTGQDVAYVQEPGMTGNGYGVNFKLTNDGAKKFAEVAYGMGGTPVE
LYMDDKLISSPVLSQGLADGNLHPDQVITVAGSSPTKDDENEAWMIYTSLKSGSLPVKVNIEYISSVSPTLGEEFIKGSI
IAGLFAFLAVGVVIAVRYKTPTIVIPILITCISEVLIILGFASLIGWKLDLASIAGIVASVGTGVDDQIVITDETISGES
NRIKRSMNRAFFIIFAAAGTTIAAMLPLFFMSIGMLRGFAITTIVGVLIGIFITRPAFASMIKYVMKKYNY

Specific function: Involved In Protein Export. [C]

COG id: COG0342

COG function: function code U; Preprotein translocase subunit SecD

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family [H]

Homologues:

Organism=Escherichia coli, GI1786609, Length=388, Percent_Identity=25, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 41863; Mature: 41863

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKDTKTLILIGFIIASVLLIAFKGVSYGVDLSGGSIIVLKTEKVLSESEMATTTEIL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHHHH
SSRLNANGLSDISVYPRGTSEIVVEIPKGVDLERIKQILTQQGVFYAKIDGKIAYTGQDV
HHHCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCEEEECCCCE
AYVQEPGMTGNGYGVNFKLTNDGAKKFAEVAYGMGGTPVELYMDDKLISSPVLSQGLADG
EEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHCCCCCC
NLHPDQVITVAGSSPTKDDENEAWMIYTSLKSGSLPVKVNIEYISSVSPTLGEEFIKGSI
CCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEHEECCCCHHHHHHHHHHHH
IAGLFAFLAVGVVIAVRYKTPTIVIPILITCISEVLIILGFASLIGWKLDLASIAGIVAS
HHHHHHHHHHHHHEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTGVDDQIVITDETISGESNRIKRSMNRAFFIIFAAAGTTIAAMLPLFFMSIGMLRGFA
HCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
ITTIVGVLIGIFITRPAFASMIKYVMKKYNY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLLKDTKTLILIGFIIASVLLIAFKGVSYGVDLSGGSIIVLKTEKVLSESEMATTTEIL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHHHH
SSRLNANGLSDISVYPRGTSEIVVEIPKGVDLERIKQILTQQGVFYAKIDGKIAYTGQDV
HHHCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCEEEECCCCE
AYVQEPGMTGNGYGVNFKLTNDGAKKFAEVAYGMGGTPVELYMDDKLISSPVLSQGLADG
EEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHCCCCCC
NLHPDQVITVAGSSPTKDDENEAWMIYTSLKSGSLPVKVNIEYISSVSPTLGEEFIKGSI
CCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEHEECCCCHHHHHHHHHHHH
IAGLFAFLAVGVVIAVRYKTPTIVIPILITCISEVLIILGFASLIGWKLDLASIAGIVAS
HHHHHHHHHHHHHEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTGVDDQIVITDETISGESNRIKRSMNRAFFIIFAAAGTTIAAMLPLFFMSIGMLRGFA
HCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
ITTIVGVLIGIFITRPAFASMIKYVMKKYNY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]