| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401427
Identifier: 150401427
GI number: 150401427
Start: 1027222
End: 1027893
Strand: Direct
Name: 150401427
Synonym: Maeo_1003
Alternate gene names: NA
Gene position: 1027222-1027893 (Clockwise)
Preceding gene: 150401425
Following gene: 150401428
Centisome position: 65.45
GC content: 26.19
Gene sequence:
>672_bases ATGATATATATACCAGCCATATCATCAATTAATTCTAATATATTTCAACCACTGGGCATAATATTTATAATAATTATAAT TGCATTATTGCTTTTATTAGCCATCAATGGAATTTTAGGATATATATTATTAAAGAAAAATAAATTAATATTCCCTAAAT TATTTTTATATATCATGGACAATTATTTTTCAATATTGCTTAAATTTTTCTTAATAATTGGAACTGAGGAAACATTTTAT AAAATAGGTATTGAATTATACAATAAATATTATGCCGAGGATTACAAAAAGGCAAAAAATAAAGTTATGATATTACCACA TTGTCTAAGAGATTTAAAATGCCCTGCAAAACTTGGAAAAGATGGTATTGGATGCGTATTTTGTAAAAAATGCCCATTGG GAGACATAATAAAAGCGGCAAAAGAAAAAAATATTGCCGTATATATTGTCCCAGGCTCAACATTTTTAAAAAGAATATTA AAAGAAAAAAGACCAGATGCCGTTTTTGGTGTTGCCTGTTATTCTGATTTATTTCATGTCATGAATTATCTTTCAAGGAA AGGTATGCCCACACAAGGTCAATTGCTTTTAACAGATGGTTGTATATGCACTACAATAGATGTAAAAGAATTATTAGATG ATATAAGTAGAACTGAACAAAATATAAAATAA
Upstream 100 bases:
>100_bases ATTATATCAATTGGATTATATTAAGACATATTGAATAATATATTTGATTTAATACTTATTGATTAATTATAAATTTAGTT ATAAATTAGACTGTGAAATT
Downstream 100 bases:
>100_bases AATATCAATAACATATTTAATTTTATAATATAACATATAAAAACTAAAAAAATAATAATTCAATAACATATAAAAACTAA AACATACTATTTTATTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIYIPAISSINSNIFQPLGIIFIIIIIALLLLLAINGILGYILLKKNKLIFPKLFLYIMDNYFSILLKFFLIIGTEETFY KIGIELYNKYYAEDYKKAKNKVMILPHCLRDLKCPAKLGKDGIGCVFCKKCPLGDIIKAAKEKNIAVYIVPGSTFLKRIL KEKRPDAVFGVACYSDLFHVMNYLSRKGMPTQGQLLLTDGCICTTIDVKELLDDISRTEQNIK
Sequences:
>Translated_223_residues MIYIPAISSINSNIFQPLGIIFIIIIIALLLLLAINGILGYILLKKNKLIFPKLFLYIMDNYFSILLKFFLIIGTEETFY KIGIELYNKYYAEDYKKAKNKVMILPHCLRDLKCPAKLGKDGIGCVFCKKCPLGDIIKAAKEKNIAVYIVPGSTFLKRIL KEKRPDAVFGVACYSDLFHVMNYLSRKGMPTQGQLLLTDGCICTTIDVKELLDDISRTEQNIK >Mature_223_residues MIYIPAISSINSNIFQPLGIIFIIIIIALLLLLAINGILGYILLKKNKLIFPKLFLYIMDNYFSILLKFFLIIGTEETFY KIGIELYNKYYAEDYKKAKNKVMILPHCLRDLKCPAKLGKDGIGCVFCKKCPLGDIIKAAKEKNIAVYIVPGSTFLKRIL KEKRPDAVFGVACYSDLFHVMNYLSRKGMPTQGQLLLTDGCICTTIDVKELLDDISRTEQNIK
Specific function: Unknown
COG id: COG1852
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002829 - InterPro: IPR017446 [H]
Pfam domain/function: PF01976 DUF116 [H]
EC number: NA
Molecular weight: Translated: 25318; Mature: 25318
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYIPAISSINSNIFQPLGIIFIIIIIALLLLLAINGILGYILLKKNKLIFPKLFLYIMD CEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NYFSILLKFFLIIGTEETFYKIGIELYNKYYAEDYKKAKNKVMILPHCLRDLKCPAKLGK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCCHHHCC DGIGCVFCKKCPLGDIIKAAKEKNIAVYIVPGSTFLKRILKEKRPDAVFGVACYSDLFHV CCCCEEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEHHHHHHHHHHH MNYLSRKGMPTQGQLLLTDGCICTTIDVKELLDDISRTEQNIK HHHHHHCCCCCCCCEEEECCCEEEEECHHHHHHHHHHHHHCCC >Mature Secondary Structure MIYIPAISSINSNIFQPLGIIFIIIIIALLLLLAINGILGYILLKKNKLIFPKLFLYIMD CEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NYFSILLKFFLIIGTEETFYKIGIELYNKYYAEDYKKAKNKVMILPHCLRDLKCPAKLGK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCCHHHCC DGIGCVFCKKCPLGDIIKAAKEKNIAVYIVPGSTFLKRILKEKRPDAVFGVACYSDLFHV CCCCEEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEHHHHHHHHHHH MNYLSRKGMPTQGQLLLTDGCICTTIDVKELLDDISRTEQNIK HHHHHHCCCCCCCCEEEECCCEEEEECHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]