| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is purB [H]
Identifier: 150401410
GI number: 150401410
Start: 1011862
End: 1013208
Strand: Direct
Name: purB [H]
Synonym: Maeo_0986
Alternate gene names: 150401410
Gene position: 1011862-1013208 (Clockwise)
Preceding gene: 150401409
Following gene: 150401411
Centisome position: 64.47
GC content: 35.71
Gene sequence:
>1347_bases ATGGCAGTGCATCCTATTGATTTTAGATATGGTTCAAAAGAAATGAAAGAAGTTTGGGAAGAAGAAACAAAACTTCAAAA AATGCTTGAAGTTGAGGCAGCTATTGCAATGGCACAGGGAGAATTAGGTATAATTCCTATGGAAGCTGCTGAGGAAATAA ATAGAAAGGCGTCAACAAAATTTGTAAGCCTTGAAAGAGCAAAAGAGATTGAAATGGAAACCAGACACGATATAGTATCA ATGGTTAAGGCTTTTGCGGAAGTTTGTGATAATGGTGCAGGAGAATATATCCATTTTGGAGCTACTTCAAATGATATAGT GGATACATCCCAATCACTTCAATTTAAAGATGCTGTAAAAATATTGTTAGAAAAATTAGAGACATTAAAAGGGGAGCTCC TTGCAAAAGCAGAGGAACACAAAACAACAGTATGTATAGGTAGAACACATGGACAGCATGCCATACCTACAACATACGGA ATGAAATTCGCATTATGGGCTTCGGAGCTCCAAAGACATATTGACAGATTAAACAGCTGTAAAGATAGATTATGTGTTTC CATGATTACGGGAGCCGTTGGAACTATGGCGGCTCTCGGAGAAAATGGAATGACAATTCATAAAAGAGTAGGGGAGCTCC TTGGTTTAACTCCTGTTTTAATCTCCAATCAAGTAATCCAAAGAGATAGACACGGGGAATTTATGGCAATTCTCGCCTTA ATTGCTCAAACACTCAATAAAATAGGTATAACTGTAAGAAGCATGCAAAGAACAGAAATTAAAGAATTGGAAGAAGAATT CGATGCTTCAAAACAAACTGGGAGCTCCACGATGCCACACAAAAGAAATCCTATTACATTTGAGCAAATTTGCGGTTTAT CCAGAGTTGTAAAGGCTAATGCACTTGGAGAGTTTGACAACATTCCATTGTGGGAAGAAAGAGATTTAACAAATTCCTCA GCTGAAAGATGTTTATTCCCTGAATCCTGTGTATTGTTAGACCATATATTAAATTTATCAATAAAAGGAATGAGAAAATT AACAGTGAATCTCCAAAATGTTCAAAGAAACCTTGAAGCTACAAACGGGCTTATTATGGCAGAAAGAGCTATGATTACTT TGGCAAATAAAGGAATGGGAAGACAGACCGCCTATGGTGTTGTTAGAGTTTGTGCTATGAAGTCATTTGAGGAAAACAGA CATTTAAAAGAAGTGTTAATGGAAGATGCCGAAGTAATGAAGTTTATGAATAAAGAAGAACTTGACAGCTTATTTGATTA TTCAACATACATAGGATTAGCCCCTGAAATTGTTGAAAATGTGATTAATGAATTAAAAAATAAATAA
Upstream 100 bases:
>100_bases CAAAAACAGAAGATATAAAAATTAAAAATTCACGGTGAAAACATATATAAAATCAAAGATTTTATATTTTTTCACTTAAA AAGATAAAGAGCGTGAAAAA
Downstream 100 bases:
>100_bases AAATAATAAAAAATGATATTATGGACTGGATAAAAGAATATTTACATATTCTCCAATGTCCTTTTTGTGGGGGAGATTTG GGGCTTCAAAATAATAAATT
Product: adenylosuccinate lyase
Products: NA
Alternate protein names: ASL; Adenylosuccinase; ASase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MAVHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIAMAQGELGIIPMEAAEEINRKASTKFVSLERAKEIEMETRHDIVS MVKAFAEVCDNGAGEYIHFGATSNDIVDTSQSLQFKDAVKILLEKLETLKGELLAKAEEHKTTVCIGRTHGQHAIPTTYG MKFALWASELQRHIDRLNSCKDRLCVSMITGAVGTMAALGENGMTIHKRVGELLGLTPVLISNQVIQRDRHGEFMAILAL IAQTLNKIGITVRSMQRTEIKELEEEFDASKQTGSSTMPHKRNPITFEQICGLSRVVKANALGEFDNIPLWEERDLTNSS AERCLFPESCVLLDHILNLSIKGMRKLTVNLQNVQRNLEATNGLIMAERAMITLANKGMGRQTAYGVVRVCAMKSFEENR HLKEVLMEDAEVMKFMNKEELDSLFDYSTYIGLAPEIVENVINELKNK
Sequences:
>Translated_448_residues MAVHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIAMAQGELGIIPMEAAEEINRKASTKFVSLERAKEIEMETRHDIVS MVKAFAEVCDNGAGEYIHFGATSNDIVDTSQSLQFKDAVKILLEKLETLKGELLAKAEEHKTTVCIGRTHGQHAIPTTYG MKFALWASELQRHIDRLNSCKDRLCVSMITGAVGTMAALGENGMTIHKRVGELLGLTPVLISNQVIQRDRHGEFMAILAL IAQTLNKIGITVRSMQRTEIKELEEEFDASKQTGSSTMPHKRNPITFEQICGLSRVVKANALGEFDNIPLWEERDLTNSS AERCLFPESCVLLDHILNLSIKGMRKLTVNLQNVQRNLEATNGLIMAERAMITLANKGMGRQTAYGVVRVCAMKSFEENR HLKEVLMEDAEVMKFMNKEELDSLFDYSTYIGLAPEIVENVINELKNK >Mature_447_residues AVHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIAMAQGELGIIPMEAAEEINRKASTKFVSLERAKEIEMETRHDIVSM VKAFAEVCDNGAGEYIHFGATSNDIVDTSQSLQFKDAVKILLEKLETLKGELLAKAEEHKTTVCIGRTHGQHAIPTTYGM KFALWASELQRHIDRLNSCKDRLCVSMITGAVGTMAALGENGMTIHKRVGELLGLTPVLISNQVIQRDRHGEFMAILALI AQTLNKIGITVRSMQRTEIKELEEEFDASKQTGSSTMPHKRNPITFEQICGLSRVVKANALGEFDNIPLWEERDLTNSSA ERCLFPESCVLLDHILNLSIKGMRKLTVNLQNVQRNLEATNGLIMAERAMITLANKGMGRQTAYGVVRVCAMKSFEENRH LKEVLMEDAEVMKFMNKEELDSLFDYSTYIGLAPEIVENVINELKNK
Specific function: De novo purine biosynthesis; eighth step. [C]
COG id: COG0015
COG function: function code F; Adenylosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557269, Length=453, Percent_Identity=27.3730684326711, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI183227688, Length=387, Percent_Identity=28.1653746770026, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1787376, Length=407, Percent_Identity=28.7469287469287, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17508577, Length=373, Percent_Identity=28.9544235924933, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI32564234, Length=306, Percent_Identity=29.7385620915033, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17553882, Length=215, Percent_Identity=30.6976744186047, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI32565146, Length=208, Percent_Identity=32.2115384615385, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323391, Length=455, Percent_Identity=27.6923076923077, Blast_Score=162, Evalue=8e-41, Organism=Drosophila melanogaster, GI24647570, Length=455, Percent_Identity=27.2527472527473, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24640179, Length=220, Percent_Identity=31.8181818181818, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640177, Length=220, Percent_Identity=31.8181818181818, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24662684, Length=219, Percent_Identity=28.310502283105, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI78710009, Length=225, Percent_Identity=29.7777777777778, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019468 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - InterPro: IPR004769 [H]
Pfam domain/function: PF10397 ADSL_C; PF00206 Lyase_1 [H]
EC number: =4.3.2.2 [H]
Molecular weight: Translated: 50293; Mature: 50162
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIAMAQGELGIIPMEAAEEINRKASTK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH FVSLERAKEIEMETRHDIVSMVKAFAEVCDNGAGEYIHFGATSNDIVDTSQSLQFKDAVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCHHHHHHHHHHH ILLEKLETLKGELLAKAEEHKTTVCIGRTHGQHAIPTTYGMKFALWASELQRHIDRLNSC HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHH KDRLCVSMITGAVGTMAALGENGMTIHKRVGELLGLTPVLISNQVIQRDRHGEFMAILAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH IAQTLNKIGITVRSMQRTEIKELEEEFDASKQTGSSTMPHKRNPITFEQICGLSRVVKAN HHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHCHHHHHHHH ALGEFDNIPLWEERDLTNSSAERCLFPESCVLLDHILNLSIKGMRKLTVNLQNVQRNLEA CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHH TNGLIMAERAMITLANKGMGRQTAYGVVRVCAMKSFEENRHLKEVLMEDAEVMKFMNKEE HCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LDSLFDYSTYIGLAPEIVENVINELKNK HHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure AVHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIAMAQGELGIIPMEAAEEINRKASTK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH FVSLERAKEIEMETRHDIVSMVKAFAEVCDNGAGEYIHFGATSNDIVDTSQSLQFKDAVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCHHHHHHHHHHH ILLEKLETLKGELLAKAEEHKTTVCIGRTHGQHAIPTTYGMKFALWASELQRHIDRLNSC HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHH KDRLCVSMITGAVGTMAALGENGMTIHKRVGELLGLTPVLISNQVIQRDRHGEFMAILAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH IAQTLNKIGITVRSMQRTEIKELEEEFDASKQTGSSTMPHKRNPITFEQICGLSRVVKAN HHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHCHHHHHHHH ALGEFDNIPLWEERDLTNSSAERCLFPESCVLLDHILNLSIKGMRKLTVNLQNVQRNLEA CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHH TNGLIMAERAMITLANKGMGRQTAYGVVRVCAMKSFEENRHLKEVLMEDAEVMKFMNKEE HCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LDSLFDYSTYIGLAPEIVENVINELKNK HHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]