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The map label for this gene is radA [H]

Identifier: 150401406

GI number: 150401406

Start: 1003924

End: 1004892

Strand: Direct

Name: radA [H]

Synonym: Maeo_0982

Alternate gene names: 150401406

Gene position: 1003924-1004892 (Clockwise)

Preceding gene: 150401377

Following gene: 150401409

Centisome position: 63.96

GC content: 35.09

Gene sequence:

>969_bases
ATGACAGATAATTTAACAGATTTACCAGGAGTAGGTCCTTCAACCGCTGAAAAATTAATAGAAGGCGGATACATAGATTT
TATGAAAATTGCCACTGCCACAATAGGTGAACTTGTAGATATCGAAGGAATTAGTGAGAAAGCCGCGGCAAAAATGATAA
TGGGAGCTCGGGATTTATGCGACTTAGGATTTAAAAGTGGTGTAGATTTATTAAATCAAAGAAAAAGTGTATGGAGGTTA
TCAACAGGGAGCTCCGAATTAGATGATGTATTGGCAGGAGGATTAGAAAGTCAATCCATAACAGAATTTGCAGGATTATT
TGGTTGTGGAAAAACACAGGTGGCACATCAAGCTTGTGTAAATCTCCAATCAAGAGAAAATATTTTCGCAGACGAAGAAC
ATATCTCAGAAGAAGAAATTGAAAATGCAAAAGCCGTATATATTGATACAGAAGGAACTTTTAGACCTGAAAGAATAATA
CAGATGGCCGAGGCCATGGGGATTGATGGAAATAAAGTTTTAGACAATACATTTGTAGCTAGGGCATATAATTCCGATAT
GCAGATGCTTTTTGCTGAAAAAGTAGAAGAATTGATAAAAGATGGAGAAAACATTAAATTAGTAATTGTTGATTCATTGA
CAAGCACATTTAGAAATGAATACACCGGTAGAGGAAAATTATCCGAAAGACAGCAAAAATTAGGTAGGCATATGTCTGTT
TTAAATAAATTGGCTGACCTACACAACTGTATTGTAATGATAACAAACCAAGTTTCCGCAAAACCTGATGCCTTCTTTGG
AATTCAAGAACAAGCTATTGGAGGAAATATTGTAGGGCATGCCGCAACATTTAGGTTCTTTTTAAGAAAAGGAAAAGGAG
ATAAAAGAGTTGCTAAATTATATGATTCCCCACATTTACCAGATGCAGAGGCAATATTTAGAATTACAGAAAAAGGTATT
CATGATTAA

Upstream 100 bases:

>100_bases
GTTTAGAAATATAGTTAAGAATATAGTTAATAACTCATTCAGTAAAATACTATTTTAATAATATTTATAATTATATAATG
CATCATATCAAGGTGGATAT

Downstream 100 bases:

>100_bases
GCGGAGAATAGGAGCTCCCAAAATAAAAATAAAACTAATAAAATAAAAATATAAGAAAGTAATATTATTTCTTTCTTATA
TCCCTTAAACTTCTTTTTTT

Product: DNA repair and recombination protein RadA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTDNLTDLPGVGPSTAEKLIEGGYIDFMKIATATIGELVDIEGISEKAAAKMIMGARDLCDLGFKSGVDLLNQRKSVWRL
STGSSELDDVLAGGLESQSITEFAGLFGCGKTQVAHQACVNLQSRENIFADEEHISEEEIENAKAVYIDTEGTFRPERII
QMAEAMGIDGNKVLDNTFVARAYNSDMQMLFAEKVEELIKDGENIKLVIVDSLTSTFRNEYTGRGKLSERQQKLGRHMSV
LNKLADLHNCIVMITNQVSAKPDAFFGIQEQAIGGNIVGHAATFRFFLRKGKGDKRVAKLYDSPHLPDAEAIFRITEKGI
HD

Sequences:

>Translated_322_residues
MTDNLTDLPGVGPSTAEKLIEGGYIDFMKIATATIGELVDIEGISEKAAAKMIMGARDLCDLGFKSGVDLLNQRKSVWRL
STGSSELDDVLAGGLESQSITEFAGLFGCGKTQVAHQACVNLQSRENIFADEEHISEEEIENAKAVYIDTEGTFRPERII
QMAEAMGIDGNKVLDNTFVARAYNSDMQMLFAEKVEELIKDGENIKLVIVDSLTSTFRNEYTGRGKLSERQQKLGRHMSV
LNKLADLHNCIVMITNQVSAKPDAFFGIQEQAIGGNIVGHAATFRFFLRKGKGDKRVAKLYDSPHLPDAEAIFRITEKGI
HD
>Mature_321_residues
TDNLTDLPGVGPSTAEKLIEGGYIDFMKIATATIGELVDIEGISEKAAAKMIMGARDLCDLGFKSGVDLLNQRKSVWRLS
TGSSELDDVLAGGLESQSITEFAGLFGCGKTQVAHQACVNLQSRENIFADEEHISEEEIENAKAVYIDTEGTFRPERIIQ
MAEAMGIDGNKVLDNTFVARAYNSDMQMLFAEKVEELIKDGENIKLVIVDSLTSTFRNEYTGRGKLSERQQKLGRHMSVL
NKLADLHNCIVMITNQVSAKPDAFFGIQEQAIGGNIVGHAATFRFFLRKGKGDKRVAKLYDSPHLPDAEAIFRITEKGIH
D

Specific function: Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules [H]

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic recA-like protein family [H]

Homologues:

Organism=Homo sapiens, GI19924133, Length=316, Percent_Identity=41.7721518987342, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI23238219, Length=317, Percent_Identity=39.1167192429022, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI256017143, Length=322, Percent_Identity=40.0621118012422, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI256017141, Length=322, Percent_Identity=40.0621118012422, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI256017145, Length=237, Percent_Identity=39.662447257384, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI17402896, Length=358, Percent_Identity=26.536312849162, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI46255039, Length=329, Percent_Identity=26.4437689969605, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI19924117, Length=329, Percent_Identity=26.4437689969605, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI10835029, Length=329, Percent_Identity=26.4437689969605, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71997301, Length=309, Percent_Identity=42.0711974110032, Blast_Score=230, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI71997295, Length=309, Percent_Identity=42.0711974110032, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6321027, Length=317, Percent_Identity=42.5867507886435, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6320942, Length=316, Percent_Identity=38.6075949367089, Blast_Score=201, Evalue=2e-52,
Organism=Drosophila melanogaster, GI17864108, Length=295, Percent_Identity=41.6949152542373, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24651285, Length=284, Percent_Identity=41.9014084507042, Blast_Score=207, Evalue=7e-54,
Organism=Drosophila melanogaster, GI17136506, Length=288, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013632
- InterPro:   IPR011938
- InterPro:   IPR016467
- InterPro:   IPR020588
- InterPro:   IPR010995
- InterPro:   IPR003583
- InterPro:   IPR020587 [H]

Pfam domain/function: PF08423 Rad51 [H]

EC number: 3.6.1.-

Molecular weight: Translated: 35396; Mature: 35264

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNLTDLPGVGPSTAEKLIEGGYIDFMKIATATIGELVDIEGISEKAAAKMIMGARDLC
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHH
DLGFKSGVDLLNQRKSVWRLSTGSSELDDVLAGGLESQSITEFAGLFGCGKTQVAHQACV
HHHHHCCHHHHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH
NLQSRENIFADEEHISEEEIENAKAVYIDTEGTFRPERIIQMAEAMGIDGNKVLDNTFVA
CCHHHCCCCCCHHHCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
RAYNSDMQMLFAEKVEELIKDGENIKLVIVDSLTSTFRNEYTGRGKLSERQQKLGRHMSV
HHHCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LNKLADLHNCIVMITNQVSAKPDAFFGIQEQAIGGNIVGHAATFRFFLRKGKGDKRVAKL
HHHHHHHHHHHHEEECCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
YDSPHLPDAEAIFRITEKGIHD
HCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDNLTDLPGVGPSTAEKLIEGGYIDFMKIATATIGELVDIEGISEKAAAKMIMGARDLC
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHH
DLGFKSGVDLLNQRKSVWRLSTGSSELDDVLAGGLESQSITEFAGLFGCGKTQVAHQACV
HHHHHCCHHHHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH
NLQSRENIFADEEHISEEEIENAKAVYIDTEGTFRPERIIQMAEAMGIDGNKVLDNTFVA
CCHHHCCCCCCHHHCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
RAYNSDMQMLFAEKVEELIKDGENIKLVIVDSLTSTFRNEYTGRGKLSERQQKLGRHMSV
HHHCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LNKLADLHNCIVMITNQVSAKPDAFFGIQEQAIGGNIVGHAATFRFFLRKGKGDKRVAKL
HHHHHHHHHHHHEEECCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
YDSPHLPDAEAIFRITEKGIHD
HCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9922255 [H]