| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401400
Identifier: 150401400
GI number: 150401400
Start: 995818
End: 997206
Strand: Reverse
Name: 150401400
Synonym: Maeo_0976
Alternate gene names: NA
Gene position: 997206-995818 (Counterclockwise)
Preceding gene: 150401401
Following gene: 150401399
Centisome position: 63.54
GC content: 27.65
Gene sequence:
>1389_bases ATGTTAAAAAAATGCTTTACTATTCTATTGGCTATTCTTCTTTTAGCATCCCCAGTTAATGCATTCTTTTCTTTCGATTT TTCAATGTCTCAAAGTAGGGCAGTTGCAGGAGCAACAATTGCAACCGAGATAATTGCAGATACGATGGTTAGTAATTATA TAGACGAAAACCATCCAGAATATTCAGGTGCATATACTGTTGTTTCTTTGATATTTGACCCCACGGGAAAGATAGTTAGT AAATTATCTTCAAAGGGATTAAAATATGCTAATGAAATATACGACTATTCTAAGAAAGCAGATAATGGAAAAGATATTGT AGATTCTAATGTTTTAAATAATATATTTGATAAGGATTTAATTGAAGAGTTAGCAGAGAAAAAAAGCAGAGGATATAATC CAAAAACAGTTGCAGATAATGTTGTTAATCTATTAGATGAAGGAGTTGAGCCAGAGAATATTAACAAGCTGTTTAAAGAT GCTGTTAAAAATGATAAAAAACTTGGATGGATAGATAACAGAATATCTAAACTCAAAGATAAAAGAGTAGAAACAAGCAC AATAAACAGCATCATCAAAAACAGCAACAAACCAAACGATGCTCTTAAAAAAGCAGTAGATGAAACAAATAAATTATCTA AGATGGGAATATCTAAAAGTTCTATTGCTAAAATAACTAAAAATGCTAATAATGTAAATGATTTAACAAAACAAAGAAAA ATCATTGGAAATTTAAAGAAAAGGCATATTTCAGATGATGCTATAAATGAGTTAATAGAAAAAGGTTATGATTTAGAAAA AGCGAAAGATACTATTGTAGAATTGAGAAATAAAGGAGTTCCAGCGAAGATAATAGATGATTTGATTAAGAAAGAATATT CTTTAAAAGAAATATCTGCATTACAATACCTTAAAGGAAAAATTGATTTCAAAGATATAGAAAAACTCTCAAGTATAAAA AATCCTGACAATCCAAGTCAATATGTGTTGCAGAAGGTATTAAGAGATATTGCAAAAAATAACGAAAAGGCAAACGATAT AGCATTTGAACTAAAAACAGCATCAAGATTAATAGATAAAGGAGAGAATGTTATTAAGTTTTCTATGAATCATAATAGGG AAGAAATAGATGCATTAACGGATAAGGCGGTGTATGAATGTAAAAATATAAAACCAAGTAAAAAAATAAGTGACAAAGAT ATAAGAGATTGGACAAATCAATTAAACAGAAAAATTGAAGCTACAGGTAAAACAGGAATACTTGTATTTCCAAAACACTC TAAAATTAGTGTAAAAAATGCAAAAGAGATATTTAAAAAATATAATATAGAAAAAGTCGCATTTGTTTCAGATAAAGAGA TAATTGTAAAAAATATAGATGAATTATAA
Upstream 100 bases:
>100_bases CGTAAGTTATATATATACTTCTTTTTTGTTTATATTATTATATCATATATATTACATATCAAATTTAAGGGGTTATCAAA TTTAAAGGGTGAACTCAACT
Downstream 100 bases:
>100_bases AAGTAATGGGTGATAACATGTCTTCAGACCTTTTAATTAATTTTTATACAAAAGAAAATCCTAAAAAATATGAAAAAATA CTTAAAAATTATAAGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MLKKCFTILLAILLLASPVNAFFSFDFSMSQSRAVAGATIATEIIADTMVSNYIDENHPEYSGAYTVVSLIFDPTGKIVS KLSSKGLKYANEIYDYSKKADNGKDIVDSNVLNNIFDKDLIEELAEKKSRGYNPKTVADNVVNLLDEGVEPENINKLFKD AVKNDKKLGWIDNRISKLKDKRVETSTINSIIKNSNKPNDALKKAVDETNKLSKMGISKSSIAKITKNANNVNDLTKQRK IIGNLKKRHISDDAINELIEKGYDLEKAKDTIVELRNKGVPAKIIDDLIKKEYSLKEISALQYLKGKIDFKDIEKLSSIK NPDNPSQYVLQKVLRDIAKNNEKANDIAFELKTASRLIDKGENVIKFSMNHNREEIDALTDKAVYECKNIKPSKKISDKD IRDWTNQLNRKIEATGKTGILVFPKHSKISVKNAKEIFKKYNIEKVAFVSDKEIIVKNIDEL
Sequences:
>Translated_462_residues MLKKCFTILLAILLLASPVNAFFSFDFSMSQSRAVAGATIATEIIADTMVSNYIDENHPEYSGAYTVVSLIFDPTGKIVS KLSSKGLKYANEIYDYSKKADNGKDIVDSNVLNNIFDKDLIEELAEKKSRGYNPKTVADNVVNLLDEGVEPENINKLFKD AVKNDKKLGWIDNRISKLKDKRVETSTINSIIKNSNKPNDALKKAVDETNKLSKMGISKSSIAKITKNANNVNDLTKQRK IIGNLKKRHISDDAINELIEKGYDLEKAKDTIVELRNKGVPAKIIDDLIKKEYSLKEISALQYLKGKIDFKDIEKLSSIK NPDNPSQYVLQKVLRDIAKNNEKANDIAFELKTASRLIDKGENVIKFSMNHNREEIDALTDKAVYECKNIKPSKKISDKD IRDWTNQLNRKIEATGKTGILVFPKHSKISVKNAKEIFKKYNIEKVAFVSDKEIIVKNIDEL >Mature_462_residues MLKKCFTILLAILLLASPVNAFFSFDFSMSQSRAVAGATIATEIIADTMVSNYIDENHPEYSGAYTVVSLIFDPTGKIVS KLSSKGLKYANEIYDYSKKADNGKDIVDSNVLNNIFDKDLIEELAEKKSRGYNPKTVADNVVNLLDEGVEPENINKLFKD AVKNDKKLGWIDNRISKLKDKRVETSTINSIIKNSNKPNDALKKAVDETNKLSKMGISKSSIAKITKNANNVNDLTKQRK IIGNLKKRHISDDAINELIEKGYDLEKAKDTIVELRNKGVPAKIIDDLIKKEYSLKEISALQYLKGKIDFKDIEKLSSIK NPDNPSQYVLQKVLRDIAKNNEKANDIAFELKTASRLIDKGENVIKFSMNHNREEIDALTDKAVYECKNIKPSKKISDKD IRDWTNQLNRKIEATGKTGILVFPKHSKISVKNAKEIFKKYNIEKVAFVSDKEIIVKNIDEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52097; Mature: 52097
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKCFTILLAILLLASPVNAFFSFDFSMSQSRAVAGATIATEIIADTMVSNYIDENHPE CHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YSGAYTVVSLIFDPTGKIVSKLSSKGLKYANEIYDYSKKADNGKDIVDSNVLNNIFDKDL CCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IEELAEKKSRGYNPKTVADNVVNLLDEGVEPENINKLFKDAVKNDKKLGWIDNRISKLKD HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KRVETSTINSIIKNSNKPNDALKKAVDETNKLSKMGISKSSIAKITKNANNVNDLTKQRK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH IIGNLKKRHISDDAINELIEKGYDLEKAKDTIVELRNKGVPAKIIDDLIKKEYSLKEISA HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH LQYLKGKIDFKDIEKLSSIKNPDNPSQYVLQKVLRDIAKNNEKANDIAFELKTASRLIDK HHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GENVIKFSMNHNREEIDALTDKAVYECKNIKPSKKISDKDIRDWTNQLNRKIEATGKTGI CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE LVFPKHSKISVKNAKEIFKKYNIEKVAFVSDKEIIVKNIDEL EEECCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCC >Mature Secondary Structure MLKKCFTILLAILLLASPVNAFFSFDFSMSQSRAVAGATIATEIIADTMVSNYIDENHPE CHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YSGAYTVVSLIFDPTGKIVSKLSSKGLKYANEIYDYSKKADNGKDIVDSNVLNNIFDKDL CCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IEELAEKKSRGYNPKTVADNVVNLLDEGVEPENINKLFKDAVKNDKKLGWIDNRISKLKD HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KRVETSTINSIIKNSNKPNDALKKAVDETNKLSKMGISKSSIAKITKNANNVNDLTKQRK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH IIGNLKKRHISDDAINELIEKGYDLEKAKDTIVELRNKGVPAKIIDDLIKKEYSLKEISA HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH LQYLKGKIDFKDIEKLSSIKNPDNPSQYVLQKVLRDIAKNNEKANDIAFELKTASRLIDK HHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GENVIKFSMNHNREEIDALTDKAVYECKNIKPSKKISDKDIRDWTNQLNRKIEATGKTGI CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE LVFPKHSKISVKNAKEIFKKYNIEKVAFVSDKEIIVKNIDEL EEECCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA