| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401378
Identifier: 150401378
GI number: 150401378
Start: 980422
End: 980844
Strand: Reverse
Name: 150401378
Synonym: Maeo_0954
Alternate gene names: NA
Gene position: 980844-980422 (Counterclockwise)
Preceding gene: 150401379
Following gene: 150401376
Centisome position: 62.49
GC content: 34.99
Gene sequence:
>423_bases ATGGTAGAATTAATAAACGAACACAAAATAGGAACCACAAAAGGAACAGACTTAGAAAAAGAAGTTGAAGCAAACTTTAA AGGAGAATGTGCAGAAGTTGGAATGTATTTGGCAATGGCAAGACAAGCTCAGAGAGAAGGTCTCCCAGAAGTTGCAGAAG TATTGAAAACAATAGCATTTGAAGAAGCTGAGCATGCCGCTAAATTTGCTGAAATGAATGGGGTAATTTCAGATAACTTA AAAGAAAACATTGAAATGATGTACAATGGAGAATGTATGGCAAACAATGAGAAAAAGGCTGCTGCAACAAAGGCAAAAGA ATTAGATATCGACCCAGCTCATGATTTCTTTGATGAATCAAGTAGAGATGAAGCAAGACATGCTAAAATGTTAAAAGGAA TATTGGAAAGATACTTCAAATAA
Upstream 100 bases:
>100_bases GGGTGTATTTATTTCTCTAATTAAATAATAAAAACACAATACGAAATATATTATAATTAATTATATAAAATATATACAAT ACGATAACAAAGGTGATTTT
Downstream 100 bases:
>100_bases ATTATTTTTTTATTTTTTTATAGTTTAATTTTATATTTTGTTTTATTATGGATATTTTTTTTATTTTTAGAAGCTCTCAT TTTTCATATGTGGGATAAAT
Product: rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVELINEHKIGTTKGTDLEKEVEANFKGECAEVGMYLAMARQAQREGLPEVAEVLKTIAFEEAEHAAKFAEMNGVISDNL KENIEMMYNGECMANNEKKAAATKAKELDIDPAHDFFDESSRDEARHAKMLKGILERYFK
Sequences:
>Translated_140_residues MVELINEHKIGTTKGTDLEKEVEANFKGECAEVGMYLAMARQAQREGLPEVAEVLKTIAFEEAEHAAKFAEMNGVISDNL KENIEMMYNGECMANNEKKAAATKAKELDIDPAHDFFDESSRDEARHAKMLKGILERYFK >Mature_140_residues MVELINEHKIGTTKGTDLEKEVEANFKGECAEVGMYLAMARQAQREGLPEVAEVLKTIAFEEAEHAAKFAEMNGVISDNL KENIEMMYNGECMANNEKKAAATKAKELDIDPAHDFFDESSRDEARHAKMLKGILERYFK
Specific function: Unknown
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 15759; Mature: 15759
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELINEHKIGTTKGTDLEKEVEANFKGECAEVGMYLAMARQAQREGLPEVAEVLKTIAF CCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EEAEHAAKFAEMNGVISDNLKENIEMMYNGECMANNEKKAAATKAKELDIDPAHDFFDES HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC SRDEARHAKMLKGILERYFK CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVELINEHKIGTTKGTDLEKEVEANFKGECAEVGMYLAMARQAQREGLPEVAEVLKTIAF CCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EEAEHAAKFAEMNGVISDNLKENIEMMYNGECMANNEKKAAATKAKELDIDPAHDFFDES HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC SRDEARHAKMLKGILERYFK CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]