| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401361
Identifier: 150401361
GI number: 150401361
Start: 957857
End: 958894
Strand: Direct
Name: 150401361
Synonym: Maeo_0935
Alternate gene names: NA
Gene position: 957857-958894 (Clockwise)
Preceding gene: 150401360
Following gene: 150401362
Centisome position: 61.03
GC content: 28.52
Gene sequence:
>1038_bases ATGATTAGTTTTGATTATTTAACCATTGCATATATTATTAATTTTATTTTATTGTCCATAGCTACCTACACAGACATAAA AACAAGGGAAATTCCCCATATAATTACCATCATAATGTTAATTATTAATTTACCTTTGGGATTTTATTTATTTGGATTTG AGGCAATTTGGGCATTTTTATCAACTTTAATATTATGTTTAATATTGGGTATCGGAATGGGAGGGGGAGATATAAAATTA TTTACAGTTTTAGCTCCGATTTTCCTATTTGCTGGAACAATATTGTATATTCCAAAGGCAATATTAATATTAATAGGAAT TAGTGCGGGAATATCTGCATTTTATCCTATGCTAAATATATTGAAAAAATATTGGAAAGAAATAATTCCTTCTTCGGCAT ATTTGGCAATGGTGTTGGGCATTATTATCTATATAATTAGTTTTTACAATGTTCCATATGCAATATTGTTTGTTTGGGGA TATATTATATTATCTGTATTCATATCTAGAAAAGTAAGCGGATATAAAGAATTTACAAAAAAGGCAGGATTTTTTGCACC ATTGTATTTGATTGGGCTGTATTTGTTAGATTATAATTATTTTGTGAATAATCAGGTATTGTTGCAATTTTTGGTCTATG TTGGGGAATTAAGCCTTATATCAATAGTGATCTATGCCTTAACTGGTGCAGAAATATCCAGTAAAAAATTGGTAAAAGAC TTAAAAGAGGGAGACATATTACGGGACATTATCACAATTGAAGGAAATTCTGTAACCGTAGAGGGGGCAAATATCTTAAA AAGATTTAAATTAATGGTAGATGCTGAAATGGGCAAAAATGAAACAGAAAATAAAAAAATATTGATGACAGATGGGGAAG GACTATATAAGGAGGACTTGGAGCTCCTACAAAAATTACATAAAGAAGGAAAAATACCTAATGAATTAAATTTAATTACA ACATATCCATTTGTTCCATTTGTATTAGTTGGTTATGTGGTGGTTTTAGTGCTTCATTATTATTTTAATTTATTTTAG
Upstream 100 bases:
>100_bases TAATATTATGGATAATCATGAATTGATGTTAAAAATAAGGGAAAAAGTTAAAAAGAAATATAAAAAGAATATTAAAGTAA ATAAATAATAAAGGGATATT
Downstream 100 bases:
>100_bases ATATAAATTTTAAAAATAAGATGGAAATATGATTTTGCTAAAAGACGGGGTAGAATACATACAATACAATTATAAATATG AGAATGAATTGGAGAAAATG
Product: peptidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MISFDYLTIAYIINFILLSIATYTDIKTREIPHIITIIMLIINLPLGFYLFGFEAIWAFLSTLILCLILGIGMGGGDIKL FTVLAPIFLFAGTILYIPKAILILIGISAGISAFYPMLNILKKYWKEIIPSSAYLAMVLGIIIYIISFYNVPYAILFVWG YIILSVFISRKVSGYKEFTKKAGFFAPLYLIGLYLLDYNYFVNNQVLLQFLVYVGELSLISIVIYALTGAEISSKKLVKD LKEGDILRDIITIEGNSVTVEGANILKRFKLMVDAEMGKNETENKKILMTDGEGLYKEDLELLQKLHKEGKIPNELNLIT TYPFVPFVLVGYVVVLVLHYYFNLF
Sequences:
>Translated_345_residues MISFDYLTIAYIINFILLSIATYTDIKTREIPHIITIIMLIINLPLGFYLFGFEAIWAFLSTLILCLILGIGMGGGDIKL FTVLAPIFLFAGTILYIPKAILILIGISAGISAFYPMLNILKKYWKEIIPSSAYLAMVLGIIIYIISFYNVPYAILFVWG YIILSVFISRKVSGYKEFTKKAGFFAPLYLIGLYLLDYNYFVNNQVLLQFLVYVGELSLISIVIYALTGAEISSKKLVKD LKEGDILRDIITIEGNSVTVEGANILKRFKLMVDAEMGKNETENKKILMTDGEGLYKEDLELLQKLHKEGKIPNELNLIT TYPFVPFVLVGYVVVLVLHYYFNLF >Mature_345_residues MISFDYLTIAYIINFILLSIATYTDIKTREIPHIITIIMLIINLPLGFYLFGFEAIWAFLSTLILCLILGIGMGGGDIKL FTVLAPIFLFAGTILYIPKAILILIGISAGISAFYPMLNILKKYWKEIIPSSAYLAMVLGIIIYIISFYNVPYAILFVWG YIILSVFISRKVSGYKEFTKKAGFFAPLYLIGLYLLDYNYFVNNQVLLQFLVYVGELSLISIVIYALTGAEISSKKLVKD LKEGDILRDIITIEGNSVTVEGANILKRFKLMVDAEMGKNETENKKILMTDGEGLYKEDLELLQKLHKEGKIPNELNLIT TYPFVPFVLVGYVVVLVLHYYFNLF
Specific function: Unknown
COG id: COG1989
COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH421 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009639 - InterPro: IPR000045 [H]
Pfam domain/function: PF06819 Arc_PepC; PF01478 Peptidase_A24 [H]
EC number: NA
Molecular weight: Translated: 39078; Mature: 39078
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFDYLTIAYIINFILLSIATYTDIKTREIPHIITIIMLIINLPLGFYLFGFEAIWAFL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STLILCLILGIGMGGGDIKLFTVLAPIFLFAGTILYIPKAILILIGISAGISAFYPMLNI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKYWKEIIPSSAYLAMVLGIIIYIISFYNVPYAILFVWGYIILSVFISRKVSGYKEFTK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAGFFAPLYLIGLYLLDYNYFVNNQVLLQFLVYVGELSLISIVIYALTGAEISSKKLVKD HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LKEGDILRDIITIEGNSVTVEGANILKRFKLMVDAEMGKNETENKKILMTDGEGLYKEDL HHHCHHHHHHEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH ELLQKLHKEGKIPNELNLITTYPFVPFVLVGYVVVLVLHYYFNLF HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISFDYLTIAYIINFILLSIATYTDIKTREIPHIITIIMLIINLPLGFYLFGFEAIWAFL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STLILCLILGIGMGGGDIKLFTVLAPIFLFAGTILYIPKAILILIGISAGISAFYPMLNI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKYWKEIIPSSAYLAMVLGIIIYIISFYNVPYAILFVWGYIILSVFISRKVSGYKEFTK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAGFFAPLYLIGLYLLDYNYFVNNQVLLQFLVYVGELSLISIVIYALTGAEISSKKLVKD HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LKEGDILRDIITIEGNSVTVEGANILKRFKLMVDAEMGKNETENKKILMTDGEGLYKEDL HHHCHHHHHHEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH ELLQKLHKEGKIPNELNLITTYPFVPFVLVGYVVVLVLHYYFNLF HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]