Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401356

Identifier: 150401356

GI number: 150401356

Start: 952754

End: 953743

Strand: Reverse

Name: 150401356

Synonym: Maeo_0930

Alternate gene names: NA

Gene position: 953743-952754 (Counterclockwise)

Preceding gene: 150401357

Following gene: 150401355

Centisome position: 60.77

GC content: 31.11

Gene sequence:

>990_bases
TTGGAAAAAGAATGGATAAAGGTAGGAATTACATTATATGGGCAAAGAAGATATATGGACGCAATAGGGGCGATAGATAC
GGCAATATCCATTAACCCAAAAAATAGCAACGCCTGGAAGCATAAAGGTATCGCATTTAGAAAATGGAAAAAATACCCCA
ATGCAATAGAATGTTTTGATAAGGCACTAAATTTAAACCCAAAAAATAGCAGTGCTTGGATGCACAAAGGAGTTTTATAT
GGCAAAATAAATAAATATGAAGAAGCAATAACATGTCTCGATAAATCATTAGAATTAACACCAAATAATGCCCGAGTTTG
GATATATAAGGGAGTAATACTTAGAAAATGGGAAAAATATGAAGAAGCAATAACTTATTTTAATAAGGCGTTGGAAATAA
ATCCAAAAGATGCCCGAGTTTGGAAACATGCGGGAGTTCTATTTAGTAAATTGGAAAAATATGAAGAAGCACTGTTATGT
TTTAACAAAGCAACAGAAGTTAATCCACGAGTTAAACAGATTTTCGATGAAAAAGGAGTTGTGCTTGAAAATTTAGGGAG
GTATGAAGAAGCACTGGAATGTTATAATATTTTATTGAATAGAAACCCAAAAAATAGTGGAATATTAAATCTTAAAATAC
GAGTTCTTAGAAAGATGAAAAGATACGAAGATGCCCTAAATTGCTGTGATGAGGTATTAAATATAAATCCAGAAAACAAA
AATACTTATTTTATTAAACTACAAATACTCAGAAATTTGGAAAGATACGAAGATGCCCTAAATTGCTGTGATGAGGTATT
AAATATTATTTCAAGTTCAAAAAAAGGCAATATTTGGAATATCAAAGGAGATATATTCAATGATTTGGGGGAGTATAATA
AAGCAATAGGATGTTTCAATAAGGCGTTGGAAATAAATCCGCATGATGATTATGCCAAACAAGGCAAAATATTTGCAATC
AATATATTGGAATTGCAAGAGGATATGTAA

Upstream 100 bases:

>100_bases
AGCACAACAAAAATTAAAAAATATGTGCATGGCATGCGATGAATTTGAAAATGAAATAAAAGAATAAAAATAAAAAATAA
AAGAATAAATAGGAGATAAT

Downstream 100 bases:

>100_bases
TCTAACTATTTTTAACATTATATATGATTTTACAATTTTGCATTTTCTATTTATATATTTAAATTAATATCAATTAACTT
TTTTAATAACATTTTAATAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MEKEWIKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPKNSSAWMHKGVLY
GKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLC
FNKATEVNPRVKQIFDEKGVVLENLGRYEEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENK
NTYFIKLQILRNLERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAIGCFNKALEINPHDDYAKQGKIFAI
NILELQEDM

Sequences:

>Translated_329_residues
MEKEWIKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPKNSSAWMHKGVLY
GKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLC
FNKATEVNPRVKQIFDEKGVVLENLGRYEEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENK
NTYFIKLQILRNLERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAIGCFNKALEINPHDDYAKQGKIFAI
NILELQEDM
>Mature_329_residues
MEKEWIKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPKNSSAWMHKGVLY
GKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLC
FNKATEVNPRVKQIFDEKGVVLENLGRYEEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENK
NTYFIKLQILRNLERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAIGCFNKALEINPHDDYAKQGKIFAI
NILELQEDM

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI167466177, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI167466175, Length=203, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI32307148, Length=287, Percent_Identity=21.9512195121951, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI32307150, Length=287, Percent_Identity=21.9512195121951, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI83415184, Length=297, Percent_Identity=23.9057239057239, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI301336134, Length=297, Percent_Identity=23.9057239057239, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI170784867, Length=256, Percent_Identity=23.4375, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI310110582, Length=148, Percent_Identity=29.0540540540541, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI310131789, Length=148, Percent_Identity=29.0540540540541, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI310123097, Length=148, Percent_Identity=29.0540540540541, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI296531396, Length=208, Percent_Identity=25.9615384615385, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=303, Percent_Identity=22.1122112211221, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115532690, Length=287, Percent_Identity=22.6480836236934, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI25147174, Length=178, Percent_Identity=24.7191011235955, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319589, Length=303, Percent_Identity=23.1023102310231, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6319387, Length=211, Percent_Identity=28.436018957346, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6321960, Length=124, Percent_Identity=25, Blast_Score=62, Evalue=9e-11,
Organism=Drosophila melanogaster, GI17647755, Length=303, Percent_Identity=21.4521452145215, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24585827, Length=303, Percent_Identity=21.4521452145215, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24585829, Length=303, Percent_Identity=21.4521452145215, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24647123, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24659892, Length=202, Percent_Identity=24.7524752475248, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI19920486, Length=318, Percent_Identity=21.0691823899371, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161076610, Length=318, Percent_Identity=21.0691823899371, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24656717, Length=309, Percent_Identity=22.6537216828479, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI18110006, Length=309, Percent_Identity=22.6537216828479, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 38304; Mature: 38304

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEWIKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFD
CCCCEEEEEEEEECCHHHHHHHHHHHCEEEECCCCCCCCHHCCCHHHHHHCCCCHHHHHH
KALNLNPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKY
HHHCCCCCCCCHHHHCCEEEECHHHHHHHHHHHHCCCEECCCCCEEEEECCHHHHHHHHH
EEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGV
HHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
VLENLGRYEEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENK
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NTYFIKLQILRNLERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAIGCFN
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHH
KALEINPHDDYAKQGKIFAINILELQEDM
HHEECCCCCCHHHCCCEEEEEEEECCCCC
>Mature Secondary Structure
MEKEWIKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFD
CCCCEEEEEEEEECCHHHHHHHHHHHCEEEECCCCCCCCHHCCCHHHHHHCCCCHHHHHH
KALNLNPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKY
HHHCCCCCCCCHHHHCCEEEECHHHHHHHHHHHHCCCEECCCCCEEEEECCHHHHHHHHH
EEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGV
HHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
VLENLGRYEEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENK
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NTYFIKLQILRNLERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAIGCFN
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHH
KALEINPHDDYAKQGKIFAINILELQEDM
HHEECCCCCCHHHCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]