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The map label for this gene is ybbB [C]

Identifier: 150401354

GI number: 150401354

Start: 950900

End: 951571

Strand: Reverse

Name: ybbB [C]

Synonym: Maeo_0928

Alternate gene names: 150401354

Gene position: 951571-950900 (Counterclockwise)

Preceding gene: 150401355

Following gene: 150401352

Centisome position: 60.63

GC content: 30.51

Gene sequence:

>672_bases
ATGGACGAAGAAATACTTTCAAGACTACTGACATTTAAAAATACCGTAATATTGGCAATACAGTTAAAAACTGGAAAAAA
ATTAATAACTGATGGAAATAAAATATTGGCTGGAAAAATAAGTGGAGAATTGGCTTCATTTATATTGAATAAATCAAAAA
CTATTGAGTTCCCTACAACTTTAAAATATAAAGATGAATTAATTTATTTTGAACCAATCGATATTAAAAAATATTTGGGT
TCTATTGGCAAGGAGCTCCTTGACGAAGTAATTACATTATCGGATTTTGAAGAGATGGATAAATCAAATGTTGTTATTGT
TGATGCCAGAGCTCCGAGAGAATATGCTAAAAAAACTATTCCAAATGCTATAAATGTGCCTATTTTTTTAGACGATGAGC
ACGAAACAATAGGAAAAACCTATAAACAAGAAGGCAGGGATAAAGCTATGAATTTAGCTTCTGAGATAATCGGGGAAAGT
ATAAAAAGAATAACCCAAAATGCCATAAAAATTGATAACAACAAAACAATTGTGGTATTTTGTGCAAGGGGAGGAATGAG
AAGTCAGGCAATGGCAACTATTTTTAAATTATTGGGCTTTAAGGTAAAAAGATTGATAGGAGGATTTAAAGGATATAATT
TAACTTATTCCATAAGAAGTCCCCTTCCGTAA

Upstream 100 bases:

>100_bases
TATATATGTTTTTGTCCAACTGATAAACTATCATAAGGACATTAAAAGAACAAAAACTTTTTGAACACACAATATAATAA
AAATAAAATATAATGATAAT

Downstream 100 bases:

>100_bases
GGGATTAAACAAAATCCTTCGGATTTTGTAGCCCTCCGCTTCGCTACGGGAGGATGAATTATGGTAATAACTTTTAGTTT
TTATTTATTTATATATATAT

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDEEILSRLLTFKNTVILAIQLKTGKKLITDGNKILAGKISGELASFILNKSKTIEFPTTLKYKDELIYFEPIDIKKYLG
SIGKELLDEVITLSDFEEMDKSNVVIVDARAPREYAKKTIPNAINVPIFLDDEHETIGKTYKQEGRDKAMNLASEIIGES
IKRITQNAIKIDNNKTIVVFCARGGMRSQAMATIFKLLGFKVKRLIGGFKGYNLTYSIRSPLP

Sequences:

>Translated_223_residues
MDEEILSRLLTFKNTVILAIQLKTGKKLITDGNKILAGKISGELASFILNKSKTIEFPTTLKYKDELIYFEPIDIKKYLG
SIGKELLDEVITLSDFEEMDKSNVVIVDARAPREYAKKTIPNAINVPIFLDDEHETIGKTYKQEGRDKAMNLASEIIGES
IKRITQNAIKIDNNKTIVVFCARGGMRSQAMATIFKLLGFKVKRLIGGFKGYNLTYSIRSPLP
>Mature_223_residues
MDEEILSRLLTFKNTVILAIQLKTGKKLITDGNKILAGKISGELASFILNKSKTIEFPTTLKYKDELIYFEPIDIKKYLG
SIGKELLDEVITLSDFEEMDKSNVVIVDARAPREYAKKTIPNAINVPIFLDDEHETIGKTYKQEGRDKAMNLASEIIGES
IKRITQNAIKIDNNKTIVVFCARGGMRSQAMATIFKLLGFKVKRLIGGFKGYNLTYSIRSPLP

Specific function: Unknown

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=131, Percent_Identity=29.7709923664122, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 25053; Mature: 25053

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEEILSRLLTFKNTVILAIQLKTGKKLITDGNKILAGKISGELASFILNKSKTIEFPTT
CCHHHHHHHHHHCCEEEEEEEECCCCEEEECCCEEEEEEHHHHHHHHHHCCCCEEECCCE
LKYKDELIYFEPIDIKKYLGSIGKELLDEVITLSDFEEMDKSNVVIVDARAPREYAKKTI
ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHC
PNAINVPIFLDDEHETIGKTYKQEGRDKAMNLASEIIGESIKRITQNAIKIDNNKTIVVF
CCCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEE
CARGGMRSQAMATIFKLLGFKVKRLIGGFKGYNLTYSIRSPLP
ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MDEEILSRLLTFKNTVILAIQLKTGKKLITDGNKILAGKISGELASFILNKSKTIEFPTT
CCHHHHHHHHHHCCEEEEEEEECCCCEEEECCCEEEEEEHHHHHHHHHHCCCCEEECCCE
LKYKDELIYFEPIDIKKYLGSIGKELLDEVITLSDFEEMDKSNVVIVDARAPREYAKKTI
ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHC
PNAINVPIFLDDEHETIGKTYKQEGRDKAMNLASEIIGESIKRITQNAIKIDNNKTIVVF
CCCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEE
CARGGMRSQAMATIFKLLGFKVKRLIGGFKGYNLTYSIRSPLP
ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]