| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401308
Identifier: 150401308
GI number: 150401308
Start: 906182
End: 906523
Strand: Direct
Name: 150401308
Synonym: Maeo_0880
Alternate gene names: NA
Gene position: 906182-906523 (Clockwise)
Preceding gene: 150401307
Following gene: 150401309
Centisome position: 57.74
GC content: 30.99
Gene sequence:
>342_bases ATGGCGTGTATCGACAATTACAGTTATAATATAATATTAAAAGGCTCGTTTAAAGAATGTGCAAAATATATTAAAGATAA CTATAAAAGTATCAGGGAGCTCCAAGCAGGCGATGAAGTGATAGAAGGAGTAATGCTAATAGGAAAGCCACCAATACCTG TGGCGTATGAAGAAGACTACATAATATTCCCATATACAAAACCTTGTCATGGTAGCTATGTTTTAAAGGTGCCGTTGGAG GAATATATTGAAAGCGAAACAAAAAATAAAAAAAATAAAAAAGAAGAAGAAAATTCCGATAGCAAAAATAAAAGTATGAT ATCTAAATTAAAATTTTGGTAG
Upstream 100 bases:
>100_bases TTCCACAATATATAATGACCAAAATATAAATTATTCAAAATATAAAATAAATATATATTATGTAGATTAATTTTTAAGAT TATTTAAATTAGGGGATAAT
Downstream 100 bases:
>100_bases GTGGTATTTTGAGAGTTATGATATTATTGGGCTGTCCTGAGCCCCCCGTATTAATTCCTTCCTGTATTTCCCTTATTAAT ATGTTAAAAGAGAAAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MACIDNYSYNIILKGSFKECAKYIKDNYKSIRELQAGDEVIEGVMLIGKPPIPVAYEEDYIIFPYTKPCHGSYVLKVPLE EYIESETKNKKNKKEEENSDSKNKSMISKLKFW
Sequences:
>Translated_113_residues MACIDNYSYNIILKGSFKECAKYIKDNYKSIRELQAGDEVIEGVMLIGKPPIPVAYEEDYIIFPYTKPCHGSYVLKVPLE EYIESETKNKKNKKEEENSDSKNKSMISKLKFW >Mature_112_residues ACIDNYSYNIILKGSFKECAKYIKDNYKSIRELQAGDEVIEGVMLIGKPPIPVAYEEDYIIFPYTKPCHGSYVLKVPLEE YIESETKNKKNKKEEENSDSKNKSMISKLKFW
Specific function: Unknown
COG id: COG4033
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012031 - ProDom: PD028584 [H]
Pfam domain/function: PF08979 DUF1894 [H]
EC number: NA
Molecular weight: Translated: 13141; Mature: 13010
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACIDNYSYNIILKGSFKECAKYIKDNYKSIRELQAGDEVIEGVMLIGKPPIPVAYEEDY CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCEECCCE IIFPYTKPCHGSYVLKVPLEEYIESETKNKKNKKEEENSDSKNKSMISKLKFW EEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure ACIDNYSYNIILKGSFKECAKYIKDNYKSIRELQAGDEVIEGVMLIGKPPIPVAYEEDY CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCEECCCE IIFPYTKPCHGSYVLKVPLEEYIESETKNKKNKKEEENSDSKNKSMISKLKFW EEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]