| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yhbZ [C]
Identifier: 150401299
GI number: 150401299
Start: 897593
End: 898696
Strand: Reverse
Name: yhbZ [C]
Synonym: Maeo_0871
Alternate gene names: 150401299
Gene position: 898696-897593 (Counterclockwise)
Preceding gene: 150401300
Following gene: 150401298
Centisome position: 57.26
GC content: 36.05
Gene sequence:
>1104_bases ATGGGAATTCAGGAAGATATTAGGCATATAGAGGAAGAATTAAAGAAAACACAATATAACAAGGCAACTCAAAAGCATGT TGGGATATTGAAGGCGAAACTTGCAAAATTAAGAGATGCTCAAAGTGCTCCAAAATCAGGGAGCTCCGGGCCCTCTTATG CTGTGAGAAAAACAGGAGATGCCACAGTGGCATTTGTTGGATTTCCATCTGTGGGAAAATCTACGCTGTTAAATACCATT ACAAATGCTAATTCAGAAGTTGGAGCTTATGCCTTTACCACACTTACAATTATCCCGGGATTATTGGAATATAAAGGGGC AAAAATTCAAGTATTGGATGCACCGGGAATTATTACGGGGGCATCTTTTGGTAGGGGAAGAGGTAGCGAGGTTTTAGCAG CAATTAGGAGCGTAGATTTGGCCATGATTGTTGTTGATGTATTTTCTCCGGAACATATTCCGGTAATCGAGAGAGAATTA TATAATGTAGGTATAAGATTAGACCAAAATCCACCCGATGTAAAAATTGTAAAAAAGGACAGGGGCGGAGTTAATATCAA TACAACAATTCCACTTACCAAAATAGACGAAGATACAATTAAAGCCATACTTAACGAACACAAAATACACAATGCAGACC TTGTAATAAGGGATGACATCACAGCAGACCAGTTTATTGATGTAGTTAGTGGAAATAGAGAATATATTCCATCACTTGTG ATAGTAAATAAAATAGATTTGGCAGAGCCCGAACATATAGAAAAAATTGAAGAAGTTTTAAAAGATAGGGCACATATTTT AGTATCAGGTTATAAAAATATTAATATTGAAGAATTAAAAGACCAGATTTTTAATACTCTTGGATTTATGAAGCTTTATT TGAGGCCCCAAGGTGGAAAGGCTGATATGAAAGACCCGTTAATAGTTTTAAAGAACTCCACCGTAGAAGATGTATGTAAT AGATTGCATCGGGATTTTGTAAAGAATTTCAGATATGCTCAAATTTGGGGAAAATCGGCAAAACACCCCGGGCAAAGAGT GGGACTTAATCATGTGTTGGAAGATGAAGATATACTAACAATTGTTATTAAAAGAACTAATTAA
Upstream 100 bases:
>100_bases TTCGCTCACTCCGATAAATCTAATTTTTATATTGTGCGTATATATTATTATATATTATAATCATACAAAATTTACATAAT TATTTATTTGGTGAAATTAA
Downstream 100 bases:
>100_bases AATAATAAATAAAAATATAGGAGCTCCTTGGAGCTCCAATTAATTTTAATGATGATAAAATGACCAATGAAGAAATATAT AATAAATTAAAAAAAGCTGG
Product: small GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MGIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGDATVAFVGFPSVGKSTLLNTI TNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITGASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIEREL YNVGIRLDQNPPDVKIVKKDRGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGKADMKDPLIVLKNSTVEDVCN RLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILTIVIKRTN
Sequences:
>Translated_367_residues MGIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGDATVAFVGFPSVGKSTLLNTI TNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITGASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIEREL YNVGIRLDQNPPDVKIVKKDRGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGKADMKDPLIVLKNSTVEDVCN RLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILTIVIKRTN >Mature_366_residues GIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGDATVAFVGFPSVGKSTLLNTIT NANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITGASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIERELY NVGIRLDQNPPDVKIVKKDRGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLVI VNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGKADMKDPLIVLKNSTVEDVCNR LHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILTIVIKRTN
Specific function: Unknown
COG id: COG1163
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI4758796, Length=363, Percent_Identity=47.6584022038567, Blast_Score=340, Evalue=1e-93, Organism=Homo sapiens, GI4557537, Length=367, Percent_Identity=44.6866485013624, Blast_Score=328, Evalue=5e-90, Organism=Homo sapiens, GI24308117, Length=111, Percent_Identity=41.4414414414414, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71981008, Length=369, Percent_Identity=44.7154471544715, Blast_Score=327, Evalue=7e-90, Organism=Caenorhabditis elegans, GI17555344, Length=368, Percent_Identity=44.2934782608696, Blast_Score=325, Evalue=3e-89, Organism=Saccharomyces cerevisiae, GI6321612, Length=371, Percent_Identity=43.3962264150943, Blast_Score=315, Evalue=7e-87, Organism=Saccharomyces cerevisiae, GI6319281, Length=367, Percent_Identity=44.6866485013624, Blast_Score=313, Evalue=3e-86, Organism=Drosophila melanogaster, GI17981711, Length=368, Percent_Identity=47.2826086956522, Blast_Score=340, Evalue=8e-94, Organism=Drosophila melanogaster, GI21356473, Length=366, Percent_Identity=44.8087431693989, Blast_Score=332, Evalue=3e-91, Organism=Drosophila melanogaster, GI20129375, Length=142, Percent_Identity=33.8028169014084, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585318, Length=97, Percent_Identity=42.2680412371134, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 - InterPro: IPR004095 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF02824 TGS [H]
EC number: NA
Molecular weight: Translated: 40681; Mature: 40550
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC ATVAFVGFPSVGKSTLLNTITNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITG EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEC ASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIERELYNVGIRLDQNPPDVKIVKKD CCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEC RGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV CCCEEEEEEECEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHCCEEE IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGK EEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCC ADMKDPLIVLKNSTVEDVCNRLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILT CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCHHHCCCCCEEE IVIKRTN EEEEECC >Mature Secondary Structure GIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC ATVAFVGFPSVGKSTLLNTITNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITG EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEC ASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIERELYNVGIRLDQNPPDVKIVKKD CCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEC RGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV CCCEEEEEEECEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHCCEEE IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGK EEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCC ADMKDPLIVLKNSTVEDVCNRLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILT CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCHHHCCCCCEEE IVIKRTN EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]