| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is thrB
Identifier: 150401261
GI number: 150401261
Start: 862886
End: 863824
Strand: Direct
Name: thrB
Synonym: Maeo_0833
Alternate gene names: 150401261
Gene position: 862886-863824 (Clockwise)
Preceding gene: 150401259
Following gene: 150401263
Centisome position: 54.98
GC content: 35.25
Gene sequence:
>939_bases ATGAAAATGGTTAAAATATGTTCTCCTGCAACTTCTGCAAATTTAGGTCCTGGTTATGATGTTTTTGGATTAGCACTAAA TAATCCTTATGACACAATTACGGTGAGTATAGTAGAAGAAAAAGGAGGAAATGAAACCCTCTCAAATGAAAAAATAACCA TATCAATGGAAGGAGAGAAATGCGAAGAGATACCTACGGCAGTAGATGAAAATACTGCGGGAGTTGTAGCAAAAAAAATG ATGGAAGATTTCAATATAGATAAAAATATACAAATCCACATAGAAAAAGGAATAAAGCCCGGAAGTGGTTTAGGTAGTAG CTCGGCATCTTGTGCAGGAGTTGCCGTTGCAATAAATGAACTATTTGGTTTGGAGCTCCCAAAATTAGAGTTGGTAAAAT ATGCATCATTGGGAGAAGCTGTTGCCGCAGGAGCTCCACATGCTGACAATGTTGCACCTGCAATATATGGCGGTTTTACA ATGGTGGTAAATCAAGACCCCTTGGAAATAATACATATTCCAGTAGAATTTGAAGTATTGGTGGCACTACCAAATATACA AATATCTACAAAAGAGGCAAGGGAATTAGTTCCAAAAGAAATTCCAATAAAAGATATGGTAAATAATGTAGGAAAAGCCT GTGGAATGATTTATTCATTACATGATAACAATGTAGAATTATTTGGAAAATATATGATGCAGGATGCCGTAGTTGAACCA TGTAGGGCTACGCTAATTGATAATTATTCAGAAGTCAAGGAAAAAGTAAAAGATTTAGTATATGGAATTACCATAAGTGG CTCAGGTCCTGCAATAATCTCATTACCTAAAAAAGAATGCGTATTAGAAGTTAAAAAAATATTTAAAGAAACTTGGGATT GTCCAATATACTATACTACGCTGGGGGCTGGGGCATATGTAGTAAAGGAAGAAGAATAA
Upstream 100 bases:
>100_bases TCATCCATTTTTCCCCCATGATCCTTAATCTTTTATATATTAATGACGAATAGATACATACTATAATATAAAATATTTAT TATATATGGTTGGTGATTTT
Downstream 100 bases:
>100_bases CAGACATATAGTTAATATTATTCTTTTATTATATGATTATATTATATTTTTACAACATTCCTAAATATTTGTGGATTTGT GATGTGCATATTACGCTATC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKMVKICSPATSANLGPGYDVFGLALNNPYDTITVSIVEEKGGNETLSNEKITISMEGEKCEEIPTAVDENTAGVVAKKM MEDFNIDKNIQIHIEKGIKPGSGLGSSSASCAGVAVAINELFGLELPKLELVKYASLGEAVAAGAPHADNVAPAIYGGFT MVVNQDPLEIIHIPVEFEVLVALPNIQISTKEARELVPKEIPIKDMVNNVGKACGMIYSLHDNNVELFGKYMMQDAVVEP CRATLIDNYSEVKEKVKDLVYGITISGSGPAIISLPKKECVLEVKKIFKETWDCPIYYTTLGAGAYVVKEEE
Sequences:
>Translated_312_residues MKMVKICSPATSANLGPGYDVFGLALNNPYDTITVSIVEEKGGNETLSNEKITISMEGEKCEEIPTAVDENTAGVVAKKM MEDFNIDKNIQIHIEKGIKPGSGLGSSSASCAGVAVAINELFGLELPKLELVKYASLGEAVAAGAPHADNVAPAIYGGFT MVVNQDPLEIIHIPVEFEVLVALPNIQISTKEARELVPKEIPIKDMVNNVGKACGMIYSLHDNNVELFGKYMMQDAVVEP CRATLIDNYSEVKEKVKDLVYGITISGSGPAIISLPKKECVLEVKKIFKETWDCPIYYTTLGAGAYVVKEEE >Mature_312_residues MKMVKICSPATSANLGPGYDVFGLALNNPYDTITVSIVEEKGGNETLSNEKITISMEGEKCEEIPTAVDENTAGVVAKKM MEDFNIDKNIQIHIEKGIKPGSGLGSSSASCAGVAVAINELFGLELPKLELVKYASLGEAVAAGAPHADNVAPAIYGGFT MVVNQDPLEIIHIPVEFEVLVALPNIQISTKEARELVPKEIPIKDMVNNVGKACGMIYSLHDNNVELFGKYMMQDAVVEP CRATLIDNYSEVKEKVKDLVYGITISGSGPAIISLPKKECVLEVKKIFKETWDCPIYYTTLGAGAYVVKEEE
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily
Homologues:
Organism=Escherichia coli, GI1786184, Length=279, Percent_Identity=29.0322580645161, Blast_Score=120, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6321814, Length=323, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_META3 (A6UV93)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325027.1 - ProteinModelPortal: A6UV93 - SMR: A6UV93 - STRING: A6UV93 - GeneID: 5327004 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0833 - eggNOG: arNOG05905 - HOGENOM: HBG646290 - OMA: GSAHADN - ProtClustDB: PRK01212 - BioCyc: MAEO419665:MAEO_0833-MONOMER - GO: GO:0005737 - HAMAP: MF_00384 - InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.230.10 - PIRSF: PIRSF000676 - PRINTS: PR00958 - TIGRFAMs: TIGR00191
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =2.7.1.39
Molecular weight: Translated: 33661; Mature: 33661
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMVKICSPATSANLGPGYDVFGLALNNPYDTITVSIVEEKGGNETLSNEKITISMEGEK CCEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCH CEEIPTAVDENTAGVVAKKMMEDFNIDKNIQIHIEKGIKPGSGLGSSSASCAGVAVAINE HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH LFGLELPKLELVKYASLGEAVAAGAPHADNVAPAIYGGFTMVVNQDPLEIIHIPVEFEVL HHCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCHHHCCCEEEEEECCCEEEEEECEEEEEE VALPNIQISTKEARELVPKEIPIKDMVNNVGKACGMIYSLHDNNVELFGKYMMQDAVVEP EEECCCEEECHHHHHCCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHH CRATLIDNYSEVKEKVKDLVYGITISGSGPAIISLPKKECVLEVKKIFKETWDCPIYYTT HHHHHHCCHHHHHHHHHHHHEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEE LGAGAYVVKEEE ECCCEEEEEECC >Mature Secondary Structure MKMVKICSPATSANLGPGYDVFGLALNNPYDTITVSIVEEKGGNETLSNEKITISMEGEK CCEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCH CEEIPTAVDENTAGVVAKKMMEDFNIDKNIQIHIEKGIKPGSGLGSSSASCAGVAVAINE HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH LFGLELPKLELVKYASLGEAVAAGAPHADNVAPAIYGGFTMVVNQDPLEIIHIPVEFEVL HHCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCHHHCCCEEEEEECCCEEEEEECEEEEEE VALPNIQISTKEARELVPKEIPIKDMVNNVGKACGMIYSLHDNNVELFGKYMMQDAVVEP EEECCCEEECHHHHHCCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHH CRATLIDNYSEVKEKVKDLVYGITISGSGPAIISLPKKECVLEVKKIFKETWDCPIYYTT HHHHHHCCHHHHHHHHHHHHEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEE LGAGAYVVKEEE ECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA