| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is gch3 [H]
Identifier: 150401247
GI number: 150401247
Start: 847584
End: 848402
Strand: Reverse
Name: gch3 [H]
Synonym: Maeo_0818
Alternate gene names: 150401247
Gene position: 848402-847584 (Counterclockwise)
Preceding gene: 150401248
Following gene: 150401246
Centisome position: 54.06
GC content: 31.99
Gene sequence:
>819_bases ATGATTCAGATAACGATTATACAAATAGATAATTATGGACCTTGGACAGTTACTCCAAATCCCAGAAGGGAAAGTGATTT GCAGGCATTGCAATCACGACTATATAGTGATTTAAATTTACAGTTTGGAGCTCATAAAGGATTGGTATTTTATACTAGAT TTGACAATCTTATGGCTATTACCAATGGTATTGACACGGAGACACATAAGAGAATACAAGATAGTATTAAAAATAGATAT CCTTTTACTGTTAGTATGGCATCTGGGGTTGCGGAAACTCCTTATGAAGCACAGAAAATTGCAACTGCAAAAATTCAAAA TAAAGGAAGTGCCCAAGATAAATATAGGACTGAAATATTAGATATTGAAGAATTGGATAATTCAATAGAAAATACTGTGA CACTTGCCCATGTTGATATAAATGACATCACTGGAACGCTAACAGATTTAGAAAATGCTTATGACACATATGTTAGTGTT AATGAAGTTCATTTAGCACTGATTAAAGAACTAAAAAAATATAATGCAATGGGATTCTTTATTGGCGGAGATAATTTTAT GGCCCCATGTAATGGAATGACAGAAGAAGATTTTTTAGAGATGTTTGAAAATATTAAAAATTCAACAGGAATTGATTTAA AAGCAGGAATTGGAATTGGTAAAACTGCCGAAGATGCTTCAAATATGGCAGATATTGGATTGGAATTAATAAGGGACAAA AAAACGGCTACTCAGGTATATACATTAAATTATGAAGAATATGCCGTAGGCAATATAGTAAATCAACGGACATTAGGAGT AAATATGGATTGCAAATAA
Upstream 100 bases:
>100_bases TAATTAATAAGTATTAAATATATGCCCCATAATTATTATTTTTATAATATATTATTATTTATGGGATTAAGTCAATTGCT AAAATAACAATGATGATATC
Downstream 100 bases:
>100_bases TATTATTATATTATTATATACGCCACCCATACAATTTTGATAAAATGTATAATAAAAATAATAAAAATAATAATTTGTTG AATTTAAAGAATAAAATAAG
Product: GTP cyclohydrolase III
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIQITIIQIDNYGPWTVTPNPRRESDLQALQSRLYSDLNLQFGAHKGLVFYTRFDNLMAITNGIDTETHKRIQDSIKNRY PFTVSMASGVAETPYEAQKIATAKIQNKGSAQDKYRTEILDIEELDNSIENTVTLAHVDINDITGTLTDLENAYDTYVSV NEVHLALIKELKKYNAMGFFIGGDNFMAPCNGMTEEDFLEMFENIKNSTGIDLKAGIGIGKTAEDASNMADIGLELIRDK KTATQVYTLNYEEYAVGNIVNQRTLGVNMDCK
Sequences:
>Translated_272_residues MIQITIIQIDNYGPWTVTPNPRRESDLQALQSRLYSDLNLQFGAHKGLVFYTRFDNLMAITNGIDTETHKRIQDSIKNRY PFTVSMASGVAETPYEAQKIATAKIQNKGSAQDKYRTEILDIEELDNSIENTVTLAHVDINDITGTLTDLENAYDTYVSV NEVHLALIKELKKYNAMGFFIGGDNFMAPCNGMTEEDFLEMFENIKNSTGIDLKAGIGIGKTAEDASNMADIGLELIRDK KTATQVYTLNYEEYAVGNIVNQRTLGVNMDCK >Mature_272_residues MIQITIIQIDNYGPWTVTPNPRRESDLQALQSRLYSDLNLQFGAHKGLVFYTRFDNLMAITNGIDTETHKRIQDSIKNRY PFTVSMASGVAETPYEAQKIATAKIQNKGSAQDKYRTEILDIEELDNSIENTVTLAHVDINDITGTLTDLENAYDTYVSV NEVHLALIKELKKYNAMGFFIGGDNFMAPCNGMTEEDFLEMFENIKNSTGIDLKAGIGIGKTAEDASNMADIGLELIRDK KTATQVYTLNYEEYAVGNIVNQRTLGVNMDCK
Specific function: Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity [H]
COG id: COG2429
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal-type GTP cyclohydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007839 - ProDom: PD313320 [H]
Pfam domain/function: PF05165 GGDN [H]
EC number: =3.5.4.29 [H]
Molecular weight: Translated: 30464; Mature: 30464
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQITIIQIDNYGPWTVTPNPRRESDLQALQSRLYSDLNLQFGAHKGLVFYTRFDNLMAI CEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCEEEE TNGIDTETHKRIQDSIKNRYPFTVSMASGVAETPYEAQKIATAKIQNKGSAQDKYRTEIL ECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHC DIEELDNSIENTVTLAHVDINDITGTLTDLENAYDTYVSVNEVHLALIKELKKYNAMGFF CHHHHCCHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCEEE IGGDNFMAPCNGMTEEDFLEMFENIKNSTGIDLKAGIGIGKTAEDASNMADIGLELIRDK ECCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCC KTATQVYTLNYEEYAVGNIVNQRTLGVNMDCK CCCEEEEEECCHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure MIQITIIQIDNYGPWTVTPNPRRESDLQALQSRLYSDLNLQFGAHKGLVFYTRFDNLMAI CEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCEEEE TNGIDTETHKRIQDSIKNRYPFTVSMASGVAETPYEAQKIATAKIQNKGSAQDKYRTEIL ECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHC DIEELDNSIENTVTLAHVDINDITGTLTDLENAYDTYVSVNEVHLALIKELKKYNAMGFF CHHHHCCHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCEEE IGGDNFMAPCNGMTEEDFLEMFENIKNSTGIDLKAGIGIGKTAEDASNMADIGLELIRDK ECCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCC KTATQVYTLNYEEYAVGNIVNQRTLGVNMDCK CCCEEEEEECCHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA