| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401237
Identifier: 150401237
GI number: 150401237
Start: 836681
End: 837298
Strand: Direct
Name: 150401237
Synonym: Maeo_0808
Alternate gene names: NA
Gene position: 836681-837298 (Clockwise)
Preceding gene: 150401230
Following gene: 150401238
Centisome position: 53.31
GC content: 22.33
Gene sequence:
>618_bases ATGGAAAATCAAAATCAAAATTTATTAAAATACTTTGAAGAAAAAGATAAATATAGAGAAAACTCTTTAAAATTATCTCG TGAAATTGTAAGAGAATGCGGAATAACAATAAGACACATACATAAAAAAGATAATAATATATCATTTGACAATTTGATAA ATAAATTGGATAAATTAGCCGAATTGGTAAAAAATAACAGCGATTTAAACAAATATATAAATACACCACAACAAGAATTT GTTGAGGCCATTGTATTTTATAATATAACCTATAAAAATAATATATTAAGTTATTCGGATTTTAAAGATACAACTAAAAA CATAAATATAAACATAAAGCCAGAAAATTATCTATTGGGTTTATGTGATGTCATTGGAGAATTAAGACGAATGATATTGG AAAATATTAAAAATGACAATATTAAAAATGCTGAAAAATATTATAAATTTATGGAAGAATTATATGATTTTATAATGTTA TTTGATTGCTATAATATTGTAGATGGTTTAAGAAGAAAACAGGATGTATCTCGAAGCCTGTTGGAGAAAACTAATGGCGA TTTGGTTTATTTTATTGAAAATATAAAATTAAGAGAGATATTAAAAAACAGACAATAA
Upstream 100 bases:
>100_bases TTAACCATCTCATAATTATTATAGTATATAGTATTTAAATAATATTGCGATAACAATTTTAATAATAACTTAAACAAACA ACAAAACAGAAGGGAGCTCC
Downstream 100 bases:
>100_bases GATAAATAATAAAAAGTGATACAATGAAAAAGGAGCTCCTAACAATATACTTAAAAGGAATATGTATGGGCATTGCAGAT ATAATTCCAGGAGTTTCTGG
Product: haloacid dehalogenase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLAELVKNNSDLNKYINTPQQEF VEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLGLCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIML FDCYNIVDGLRRKQDVSRSLLEKTNGDLVYFIENIKLREILKNRQ
Sequences:
>Translated_205_residues MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLAELVKNNSDLNKYINTPQQEF VEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLGLCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIML FDCYNIVDGLRRKQDVSRSLLEKTNGDLVYFIENIKLREILKNRQ >Mature_205_residues MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLAELVKNNSDLNKYINTPQQEF VEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLGLCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIML FDCYNIVDGLRRKQDVSRSLLEKTNGDLVYFIENIKLREILKNRQ
Specific function: Unknown
COG id: COG2178
COG function: function code J; Predicted RNA-binding protein of the translin family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002848 - InterPro: IPR016069 - InterPro: IPR016068 [H]
Pfam domain/function: PF01997 Translin [H]
EC number: NA
Molecular weight: Translated: 24614; Mature: 24614
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHH ELVKNNSDLNKYINTPQQEFVEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLG HHHHCCCHHHHHHCCCHHHHHHHHHHHHCEECCCCCCCCCHHHCCCCEEEEECCCHHHHH LCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIMLFDCYNIVDGLRRKQDVSRSL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKTNGDLVYFIENIKLREILKNRQ HHHCCCCEEEEEHHHHHHHHHCCCC >Mature Secondary Structure MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHH ELVKNNSDLNKYINTPQQEFVEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLG HHHHCCCHHHHHHCCCHHHHHHHHHHHHCEECCCCCCCCCHHHCCCCEEEEECCCHHHHH LCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIMLFDCYNIVDGLRRKQDVSRSL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKTNGDLVYFIENIKLREILKNRQ HHHCCCCEEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]