Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401237

Identifier: 150401237

GI number: 150401237

Start: 836681

End: 837298

Strand: Direct

Name: 150401237

Synonym: Maeo_0808

Alternate gene names: NA

Gene position: 836681-837298 (Clockwise)

Preceding gene: 150401230

Following gene: 150401238

Centisome position: 53.31

GC content: 22.33

Gene sequence:

>618_bases
ATGGAAAATCAAAATCAAAATTTATTAAAATACTTTGAAGAAAAAGATAAATATAGAGAAAACTCTTTAAAATTATCTCG
TGAAATTGTAAGAGAATGCGGAATAACAATAAGACACATACATAAAAAAGATAATAATATATCATTTGACAATTTGATAA
ATAAATTGGATAAATTAGCCGAATTGGTAAAAAATAACAGCGATTTAAACAAATATATAAATACACCACAACAAGAATTT
GTTGAGGCCATTGTATTTTATAATATAACCTATAAAAATAATATATTAAGTTATTCGGATTTTAAAGATACAACTAAAAA
CATAAATATAAACATAAAGCCAGAAAATTATCTATTGGGTTTATGTGATGTCATTGGAGAATTAAGACGAATGATATTGG
AAAATATTAAAAATGACAATATTAAAAATGCTGAAAAATATTATAAATTTATGGAAGAATTATATGATTTTATAATGTTA
TTTGATTGCTATAATATTGTAGATGGTTTAAGAAGAAAACAGGATGTATCTCGAAGCCTGTTGGAGAAAACTAATGGCGA
TTTGGTTTATTTTATTGAAAATATAAAATTAAGAGAGATATTAAAAAACAGACAATAA

Upstream 100 bases:

>100_bases
TTAACCATCTCATAATTATTATAGTATATAGTATTTAAATAATATTGCGATAACAATTTTAATAATAACTTAAACAAACA
ACAAAACAGAAGGGAGCTCC

Downstream 100 bases:

>100_bases
GATAAATAATAAAAAGTGATACAATGAAAAAGGAGCTCCTAACAATATACTTAAAAGGAATATGTATGGGCATTGCAGAT
ATAATTCCAGGAGTTTCTGG

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLAELVKNNSDLNKYINTPQQEF
VEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLGLCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIML
FDCYNIVDGLRRKQDVSRSLLEKTNGDLVYFIENIKLREILKNRQ

Sequences:

>Translated_205_residues
MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLAELVKNNSDLNKYINTPQQEF
VEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLGLCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIML
FDCYNIVDGLRRKQDVSRSLLEKTNGDLVYFIENIKLREILKNRQ
>Mature_205_residues
MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLAELVKNNSDLNKYINTPQQEF
VEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLGLCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIML
FDCYNIVDGLRRKQDVSRSLLEKTNGDLVYFIENIKLREILKNRQ

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 24614; Mature: 24614

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHH
ELVKNNSDLNKYINTPQQEFVEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLG
HHHHCCCHHHHHHCCCHHHHHHHHHHHHCEECCCCCCCCCHHHCCCCEEEEECCCHHHHH
LCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIMLFDCYNIVDGLRRKQDVSRSL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKTNGDLVYFIENIKLREILKNRQ
HHHCCCCEEEEEHHHHHHHHHCCCC
>Mature Secondary Structure
MENQNQNLLKYFEEKDKYRENSLKLSREIVRECGITIRHIHKKDNNISFDNLINKLDKLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHH
ELVKNNSDLNKYINTPQQEFVEAIVFYNITYKNNILSYSDFKDTTKNININIKPENYLLG
HHHHCCCHHHHHHCCCHHHHHHHHHHHHCEECCCCCCCCCHHHCCCCEEEEECCCHHHHH
LCDVIGELRRMILENIKNDNIKNAEKYYKFMEELYDFIMLFDCYNIVDGLRRKQDVSRSL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKTNGDLVYFIENIKLREILKNRQ
HHHCCCCEEEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]