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The map label for this gene is rpl4lp

Identifier: 150401235

GI number: 150401235

Start: 834413

End: 835171

Strand: Reverse

Name: rpl4lp

Synonym: Maeo_0806

Alternate gene names: 150401235

Gene position: 835171-834413 (Counterclockwise)

Preceding gene: 150401236

Following gene: 150401234

Centisome position: 53.21

GC content: 36.63

Gene sequence:

>759_bases
ATGAAAGTTAAAGTTTATAACATGGACGGTTCCGAAAAAGGAGAAACCGAATTATCTGCGGTATTTGAAACAGAATACAG
ACCTGATTTAATTAAGAGGGCATTCTTATCATCATTTACTGCAAGATTACAGCCAAAAGGAGTAGACCTAATGGCAGGTA
AAAGGACTTCTGCGAAATCAATCGGTAAAGGACATGGTAGAGCAAGAGTTCAAAGAACAGGACAAGGAGCGGGAGCTTTT
GTTCCACAAGCAGTTGGTGGAAGAAGATGTCACCCTCCAAAAGTTGAAAAGATTCTTCATGAAAGAGTAAACAAAAAAGA
AAGATTAAAAGCATTAGCTAGTGCAATAGCGGCATCAGCCAACATTGAAATGGTAAAAAACAGAGGACATGTTGTTGAGA
CTGTTCCATCAGTTCCATTAATTGTATCTGATGATTTCGAATCCCTCAAAAAAACAAAAGAAGTATTGGAGACATTCAAA
AACTTAGGTTTAGATGGGGATGTTCAAAGAGCAAAAGACGGAATAAAAATTAGGTCTGGAATTGGTAAATTAAGAGGAAG
AAAATACAGAAAACCAAAAAGTGTTTTGGTTGTTGTAAGTGGTGCATGTGATGCAGTTAAAGCTTCGAAAAATCTTCCTG
GAGTAGATGTAATATCTGCCAATGATTTAGGGGTAATGCATATAGCACCTGGTGCAGATTCTGGAAGATTAACACTTTGG
ACTGAATCAGCTGTTGAAGAAATAAACAAAAGATTTTAA

Upstream 100 bases:

>100_bases
TAAATAAATGGCATATTTGGATTATTTATGCCCAATAATGAAATATAACAATATAATATAGATGTAGTTAAATACACAAT
AAACACGGATGGGTGTTATA

Downstream 100 bases:

>100_bases
TTATATAGTCAAAAAATTACTACGATAATAATATAAGTATATCCATTGAGGTGAATGGCGTGGATGCTTTCGATGTTATT
AAAATGCCAATTATCAGTGA

Product: 50S ribosomal protein L4P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKVKVYNMDGSEKGETELSAVFETEYRPDLIKRAFLSSFTARLQPKGVDLMAGKRTSAKSIGKGHGRARVQRTGQGAGAF
VPQAVGGRRCHPPKVEKILHERVNKKERLKALASAIAASANIEMVKNRGHVVETVPSVPLIVSDDFESLKKTKEVLETFK
NLGLDGDVQRAKDGIKIRSGIGKLRGRKYRKPKSVLVVVSGACDAVKASKNLPGVDVISANDLGVMHIAPGADSGRLTLW
TESAVEEINKRF

Sequences:

>Translated_252_residues
MKVKVYNMDGSEKGETELSAVFETEYRPDLIKRAFLSSFTARLQPKGVDLMAGKRTSAKSIGKGHGRARVQRTGQGAGAF
VPQAVGGRRCHPPKVEKILHERVNKKERLKALASAIAASANIEMVKNRGHVVETVPSVPLIVSDDFESLKKTKEVLETFK
NLGLDGDVQRAKDGIKIRSGIGKLRGRKYRKPKSVLVVVSGACDAVKASKNLPGVDVISANDLGVMHIAPGADSGRLTLW
TESAVEEINKRF
>Mature_252_residues
MKVKVYNMDGSEKGETELSAVFETEYRPDLIKRAFLSSFTARLQPKGVDLMAGKRTSAKSIGKGHGRARVQRTGQGAGAF
VPQAVGGRRCHPPKVEKILHERVNKKERLKALASAIAASANIEMVKNRGHVVETVPSVPLIVSDDFESLKKTKEVLETFK
NLGLDGDVQRAKDGIKIRSGIGKLRGRKYRKPKSVLVVVSGACDAVKASKNLPGVDVISANDLGVMHIAPGADSGRLTLW
TESAVEEINKRF

Specific function: Forms part of the polypeptide exit tunnel

COG id: COG0088

COG function: function code J; Ribosomal protein L4

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L4P family

Homologues:

Organism=Homo sapiens, GI16579885, Length=257, Percent_Identity=33.4630350194552, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17508669, Length=251, Percent_Identity=36.2549800796813, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6319505, Length=258, Percent_Identity=36.4341085271318, Blast_Score=135, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6320215, Length=258, Percent_Identity=36.4341085271318, Blast_Score=135, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24650747, Length=241, Percent_Identity=34.8547717842324, Blast_Score=137, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL4_META3 (A6UV67)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325001.1
- ProteinModelPortal:   A6UV67
- SMR:   A6UV67
- STRING:   A6UV67
- GeneID:   5326662
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0806
- eggNOG:   arNOG06979
- HOGENOM:   HBG316531
- OMA:   KMRGRRY
- ProtClustDB:   PRK04042
- BioCyc:   MAEO419665:MAEO_0806-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01328_A
- InterPro:   IPR002136
- InterPro:   IPR013000
- InterPro:   IPR019970
- TIGRFAMs:   TIGR03672

Pfam domain/function: PF00573 Ribosomal_L4; SSF52166 Ribosomal_L4/L1E

EC number: NA

Molecular weight: Translated: 27340; Mature: 27340

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS00939 RIBOSOMAL_L1E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKVYNMDGSEKGETELSAVFETEYRPDLIKRAFLSSFTARLQPKGVDLMAGKRTSAKS
CEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHH
IGKGHGRARVQRTGQGAGAFVPQAVGGRRCHPPKVEKILHERVNKKERLKALASAIAASA
HCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
NIEMVKNRGHVVETVPSVPLIVSDDFESLKKTKEVLETFKNLGLDGDVQRAKDGIKIRSG
CCEEHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHH
IGKLRGRKYRKPKSVLVVVSGACDAVKASKNLPGVDVISANDLGVMHIAPGADSGRLTLW
HHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEEECCCCEEEEECCCCCCCEEEEE
TESAVEEINKRF
EHHHHHHHHHCC
>Mature Secondary Structure
MKVKVYNMDGSEKGETELSAVFETEYRPDLIKRAFLSSFTARLQPKGVDLMAGKRTSAKS
CEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHH
IGKGHGRARVQRTGQGAGAFVPQAVGGRRCHPPKVEKILHERVNKKERLKALASAIAASA
HCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
NIEMVKNRGHVVETVPSVPLIVSDDFESLKKTKEVLETFKNLGLDGDVQRAKDGIKIRSG
CCEEHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHH
IGKLRGRKYRKPKSVLVVVSGACDAVKASKNLPGVDVISANDLGVMHIAPGADSGRLTLW
HHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEEECCCCEEEEECCCCCCCEEEEE
TESAVEEINKRF
EHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA