| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150401227
Identifier: 150401227
GI number: 150401227
Start: 825980
End: 826771
Strand: Direct
Name: 150401227
Synonym: Maeo_0798
Alternate gene names: NA
Gene position: 825980-826771 (Clockwise)
Preceding gene: 150401226
Following gene: 150401228
Centisome position: 52.63
GC content: 37.63
Gene sequence:
>792_bases ATGGATATATCAAAGATAGATTTAAAAGCAGATGAAAAAGCAGTAACCAAATCAATTTTTAAAGCCACATATGAAATGTG GATGGACAATCTTGAAGTAGATGTTGTAATAGTTGGAGGAGGACCTAGTGGATTAACAGCAGGTAGATACTTAGCAGATG CAGGAGTAAAAGTTTTAATTTTAGAAAGACATCTTTCCTTCGGAGGAGGAACCTGGGGAGGAGGTATGGGTTGCCCATAC ATCACAGTTCAAAGCCCAGCCGATGAAATATTAAGTGAAGTAGGAATAAAGTTAGAAGAAGGAGAAGATGGATTATTTGT TGCTGATTCCGTAGAAGTTCCGGCAAAACTGGGAACAGGAGCAATTGATGCAGGAGCAAAAGTTTTAACAGGAATTGTAG TTGAGGATGTAATATTAAAAGAAGGGAAAGTTTCAGGTGTGGTAATAAACTCCTATGCCATAAATAAAGCTGGACTTCAC ATCGACCCATTAACAATAAATGCAAAATATGTTATTGATGCTACTGGACATGACGCATCAGTTGCCTGCACCCTTGCTAG AAAAAACGAAGATTTAGGACTCGTAATTCCAGGAGAGAAATCACTTTGGGCTGACGAGGGTGAAAATGGATTATTGAAAT ATACAAAAGAATTATTCCCGGGATTATTTGTCTGCGGAATGGCATCAAATGCAACCCATGGCGGATATAGAATGGGAGCT GTATTCGGAGGAATGTATATTTCTGGAAAAATAGTAGCTGACATGATTTTAGAAAAATTGAAAAATGAATAA
Upstream 100 bases:
>100_bases TATAAGGGAGATGGTAATTTCTTCCGCATTAAGCACTATTGAACACTATAAAAAGGAAAAATAAAAATAAGTAATAATTA ATATAAAATAAGGTGAAAAA
Downstream 100 bases:
>100_bases ATTTATTTGCAAATATAAATTATAAATTATTTTTTTATCTCTTTAATTTTTTATATTGTTATATTATTTCATTTTTAATC TGGTATAATCTGATATTATG
Product: ribulose-1,5-biphosphate synthetase
Products: NA
Alternate protein names: Ribulose 1,5-bisphosphate synthase; RuBP synthase
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDISKIDLKADEKAVTKSIFKATYEMWMDNLEVDVVIVGGGPSGLTAGRYLADAGVKVLILERHLSFGGGTWGGGMGCPY ITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAIDAGAKVLTGIVVEDVILKEGKVSGVVINSYAINKAGLH IDPLTINAKYVIDATGHDASVACTLARKNEDLGLVIPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGA VFGGMYISGKIVADMILEKLKNE
Sequences:
>Translated_263_residues MDISKIDLKADEKAVTKSIFKATYEMWMDNLEVDVVIVGGGPSGLTAGRYLADAGVKVLILERHLSFGGGTWGGGMGCPY ITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAIDAGAKVLTGIVVEDVILKEGKVSGVVINSYAINKAGLH IDPLTINAKYVIDATGHDASVACTLARKNEDLGLVIPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGA VFGGMYISGKIVADMILEKLKNE >Mature_263_residues MDISKIDLKADEKAVTKSIFKATYEMWMDNLEVDVVIVGGGPSGLTAGRYLADAGVKVLILERHLSFGGGTWGGGMGCPY ITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAIDAGAKVLTGIVVEDVILKEGKVSGVVINSYAINKAGLH IDPLTINAKYVIDATGHDASVACTLARKNEDLGLVIPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGA VFGGMYISGKIVADMILEKLKNE
Specific function: Catalyzes the conversion of ribose 1,5-bisphosphate to ribulose 1,5-bisphosphate (RuBP), the CO(2) acceptor and substrate for RubisCO
COG id: COG1635
COG function: function code H; Flavoprotein involved in thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the THI4 family
Homologues:
Organism=Saccharomyces cerevisiae, GI6321583, Length=284, Percent_Identity=26.4084507042254, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RUBPS_META3 (A6UV59)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324993.1 - ProteinModelPortal: A6UV59 - SMR: A6UV59 - STRING: A6UV59 - GeneID: 5327057 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0798 - eggNOG: arNOG05705 - HOGENOM: HBG325902 - OMA: GLHVDPL - ProtClustDB: PRK04176 - BioCyc: MAEO419665:MAEO_0798-MONOMER - HAMAP: MF_00304 - InterPro: IPR003042 - InterPro: IPR002922 - InterPro: IPR022828 - PRINTS: PR00420 - TIGRFAMs: TIGR00292
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27667; Mature: 27667
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISKIDLKADEKAVTKSIFKATYEMWMDNLEVDVVIVGGGPSGLTAGRYLADAGVKVLI CCCCEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCEEEE LERHLSFGGGTWGGGMGCPYITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTG EEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEECCCCCEEEECCCCCCHHCCCC AIDAGAKVLTGIVVEDVILKEGKVSGVVINSYAINKAGLHIDPLTINAKYVIDATGHDAS CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCE VACTLARKNEDLGLVIPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGA EEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEHH VFGGMYISGKIVADMILEKLKNE HHCCEEEECHHHHHHHHHHHCCC >Mature Secondary Structure MDISKIDLKADEKAVTKSIFKATYEMWMDNLEVDVVIVGGGPSGLTAGRYLADAGVKVLI CCCCEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCEEEE LERHLSFGGGTWGGGMGCPYITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTG EEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEECCCCCEEEECCCCCCHHCCCC AIDAGAKVLTGIVVEDVILKEGKVSGVVINSYAINKAGLHIDPLTINAKYVIDATGHDAS CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCE VACTLARKNEDLGLVIPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGA EEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEHH VFGGMYISGKIVADMILEKLKNE HHCCEEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA