| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401207
Identifier: 150401207
GI number: 150401207
Start: 801086
End: 802942
Strand: Direct
Name: 150401207
Synonym: Maeo_0778
Alternate gene names: NA
Gene position: 801086-802942 (Clockwise)
Preceding gene: 150401206
Following gene: 150401208
Centisome position: 51.04
GC content: 34.09
Gene sequence:
>1857_bases ATGTATGAATGGAAGTTAAATGATATTGTAGATAATGGATTATGTGCCAAATGTGGAACATGTGTTGTTGTATGTCCTAA CAATATATTAGAATTCGAGGAAGTTCCAAAACTAACCGAAGAATGTTTAAGAAAAGGATATGGAATGTGCCATGATGTAT GCCCGAGAGTTTCATCAGGTAAATACCAAATAAGCATTAGGGAAAACTTTAAAGAAGAACATTACTATGGAAAAGGAGAT ATAGAAGGGCAAGACGGTGGAGTAGTTTCAACATTTTTAAAACATTTATTGGAAAACAAAAAAATAGATGGTGCAATTGT AGTTGGAGACGAGTGCTGGAAACCTGTTTCATTAATTGTTCAAAATCCCGAAGATATAGAAAAATCAGCGAAATCAAAAT ATGCTGTATCAACACTTGAAGCCCTAAGGGAAGCCGGAGAAATGGGTATTGAAAAGGTAGCCGTTGTTGGATTACCATGT CAAATAGCAGGCCTTAGAAAACTTCAATATTTCCCATATTTAGCAAAATATGATGGGGAGCTCGGCAAAAATGGAAAATT AGCAAAATTACCAAAAATAGAATATCTTATTGGATTGTTATGCACAGAGAAGTTTGAATATGATAAATTAAAAGAAGCCC TTGCAAAGAACGATATAAAAATTGAAGATGTAAAGAAATTTGACATCAAAAAAGGTAAATTAATTATAATTACAGAAGAT GAAGAGTATAAAATACCTTTAAAAGATATTGAAATGAATGCCGGCTGTAAAATGTGTAGGGACTTTGATGCTGAAATGGC CGATGTATCAGTTGGATGTGTTGGAAGTCCAGACGGCTACTCAACAGTGACCATCAGAACAGAGAAAGGGGAAGAAATTA AAAATGCAGTGGAGTTAAACGAAGGTGTAGAATTAGCCCCTATTGAAAAATTAAAAGAATTAAAACTTAACAGATTCAAA AAAGAACTCGAAAGAAGAAAAGAAAATAATGAAAAAATATCATTCTATTGGCTTGCTGATTATGCGGGAGTAGGTAAAAG AGCAGATAACGACTACTTTATAAGAGTAAGAGCAAAACCTGCTGGATGGTATTCGTTGGATGAAGTTAAAGAGATAGTAA AAATAACTGAAAAATATGACGGCAAAATAAAGATGACAAATAGAGGAGGCTTCGAAATCCACCATATAACTCCATTTTAT GCAGAAGACATGGCCCTGGAACTTGCTGAAAAAGACCTAATTACAGGTTCGGAAGGACCACTTGTAAGGGCAACTCTTGC ATGTCCGGGGGAAGGAAACTGTGGAAGTGGATTAATAAATACCACAGAATTATGTTCAATTATCGAAGATAATTTCATAG AACATCCTGCACCATATAAATTCAAAATTGCAATAAGTGGATGTCCAAATAAATGTGTAAGACCTCAAATCCACGAAATA GGTATTGCAGGCGTTAAATTCCCAATAACTAATGAAGAAAATTGTAATGGATGCGGAAGATGTGCCGATATTTGTAAAGT CGAAGCAATAGACATTAGGGGAGATACATCATATACAAACTACAATATATGTATAGGTTGTGGAAAATGTATAAAAGGCT GTCCAAATGAAGGTAGAGATATGAAAGAAGAAGGATTTATGGTATTCGTTGGCGGAAAATCAGGTAGGGAAGTAATTGAA GGAATAAGCATGAAATTAATGAGTATAGAGGAAATAGTAAATTTAATTGATAAAGTATTAATTGTATACCATAAATATGC CCAAAAACCGCAAAGAGAAAGATTGGGGGCAGTTATGGCAAGGGTTGGAAAAGGAAAATTCTTAGAAGAAGTTAAAGAAT TGATGGAGAAAGAATAA
Upstream 100 bases:
>100_bases TAAAATAATATATACTACTATTACTAATATTATATTGCGCCATGTGCCGATTAAATTATAAAATATAACCATGAATAATA AACATATTTAAGGTGATATA
Downstream 100 bases:
>100_bases TCATTTCAACTTTGCTTTTTCTTACTCTACTATCTTCTTTACCTTAATTAATTATTATTTTAACTATTATTTTAACTATT TATTATTTTTTTATTTTATA
Product: nitrite and sulphite reductase 4Fe-4S region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MYEWKLNDIVDNGLCAKCGTCVVVCPNNILEFEEVPKLTEECLRKGYGMCHDVCPRVSSGKYQISIRENFKEEHYYGKGD IEGQDGGVVSTFLKHLLENKKIDGAIVVGDECWKPVSLIVQNPEDIEKSAKSKYAVSTLEALREAGEMGIEKVAVVGLPC QIAGLRKLQYFPYLAKYDGELGKNGKLAKLPKIEYLIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLIIITED EEYKIPLKDIEMNAGCKMCRDFDAEMADVSVGCVGSPDGYSTVTIRTEKGEEIKNAVELNEGVELAPIEKLKELKLNRFK KELERRKENNEKISFYWLADYAGVGKRADNDYFIRVRAKPAGWYSLDEVKEIVKITEKYDGKIKMTNRGGFEIHHITPFY AEDMALELAEKDLITGSEGPLVRATLACPGEGNCGSGLINTTELCSIIEDNFIEHPAPYKFKIAISGCPNKCVRPQIHEI GIAGVKFPITNEENCNGCGRCADICKVEAIDIRGDTSYTNYNICIGCGKCIKGCPNEGRDMKEEGFMVFVGGKSGREVIE GISMKLMSIEEIVNLIDKVLIVYHKYAQKPQRERLGAVMARVGKGKFLEEVKELMEKE
Sequences:
>Translated_618_residues MYEWKLNDIVDNGLCAKCGTCVVVCPNNILEFEEVPKLTEECLRKGYGMCHDVCPRVSSGKYQISIRENFKEEHYYGKGD IEGQDGGVVSTFLKHLLENKKIDGAIVVGDECWKPVSLIVQNPEDIEKSAKSKYAVSTLEALREAGEMGIEKVAVVGLPC QIAGLRKLQYFPYLAKYDGELGKNGKLAKLPKIEYLIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLIIITED EEYKIPLKDIEMNAGCKMCRDFDAEMADVSVGCVGSPDGYSTVTIRTEKGEEIKNAVELNEGVELAPIEKLKELKLNRFK KELERRKENNEKISFYWLADYAGVGKRADNDYFIRVRAKPAGWYSLDEVKEIVKITEKYDGKIKMTNRGGFEIHHITPFY AEDMALELAEKDLITGSEGPLVRATLACPGEGNCGSGLINTTELCSIIEDNFIEHPAPYKFKIAISGCPNKCVRPQIHEI GIAGVKFPITNEENCNGCGRCADICKVEAIDIRGDTSYTNYNICIGCGKCIKGCPNEGRDMKEEGFMVFVGGKSGREVIE GISMKLMSIEEIVNLIDKVLIVYHKYAQKPQRERLGAVMARVGKGKFLEEVKELMEKE >Mature_618_residues MYEWKLNDIVDNGLCAKCGTCVVVCPNNILEFEEVPKLTEECLRKGYGMCHDVCPRVSSGKYQISIRENFKEEHYYGKGD IEGQDGGVVSTFLKHLLENKKIDGAIVVGDECWKPVSLIVQNPEDIEKSAKSKYAVSTLEALREAGEMGIEKVAVVGLPC QIAGLRKLQYFPYLAKYDGELGKNGKLAKLPKIEYLIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLIIITED EEYKIPLKDIEMNAGCKMCRDFDAEMADVSVGCVGSPDGYSTVTIRTEKGEEIKNAVELNEGVELAPIEKLKELKLNRFK KELERRKENNEKISFYWLADYAGVGKRADNDYFIRVRAKPAGWYSLDEVKEIVKITEKYDGKIKMTNRGGFEIHHITPFY AEDMALELAEKDLITGSEGPLVRATLACPGEGNCGSGLINTTELCSIIEDNFIEHPAPYKFKIAISGCPNKCVRPQIHEI GIAGVKFPITNEENCNGCGRCADICKVEAIDIRGDTSYTNYNICIGCGKCIKGCPNEGRDMKEEGFMVFVGGKSGREVIE GISMKLMSIEEIVNLIDKVLIVYHKYAQKPQRERLGAVMARVGKGKFLEEVKELMEKE
Specific function: Unknown
COG id: COG1035
COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR007516 - InterPro: IPR007525 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N; PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: NA
Molecular weight: Translated: 69200; Mature: 69200
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00365 NIR_SIR ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEWKLNDIVDNGLCAKCGTCVVVCPNNILEFEEVPKLTEECLRKGYGMCHDVCPRVSSG CCCEECHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC KYQISIRENFKEEHYYGKGDIEGQDGGVVSTFLKHLLENKKIDGAIVVGDECWKPVSLIV EEEEEEHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHEEE QNPEDIEKSAKSKYAVSTLEALREAGEMGIEKVAVVGLPCQIAGLRKLQYFPYLAKYDGE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHHHCCCC LGKNGKLAKLPKIEYLIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLIIITED CCCCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHEECCCCEEEEEECC EEYKIPLKDIEMNAGCKMCRDFDAEMADVSVGCVGSPDGYSTVTIRTEKGEEIKNAVELN CCCCCCHHHCCCCCCHHHHHHCCCCHHCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHC EGVELAPIEKLKELKLNRFKKELERRKENNEKISFYWLADYAGVGKRADNDYFIRVRAKP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECC AGWYSLDEVKEIVKITEKYDGKIKMTNRGGFEIHHITPFYAEDMALELAEKDLITGSEGP CCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC LVRATLACPGEGNCGSGLINTTELCSIIEDNFIEHPAPYKFKIAISGCPNKCVRPQIHEI EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHC GIAGVKFPITNEENCNGCGRCADICKVEAIDIRGDTSYTNYNICIGCGKCIKGCPNEGRD CCCEEEEECCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCEEEEEECCHHHCCCCCCCCC MKEEGFMVFVGGKSGREVIEGISMKLMSIEEIVNLIDKVLIVYHKYAQKPQRERLGAVMA CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RVGKGKFLEEVKELMEKE HHCCCHHHHHHHHHHHCC >Mature Secondary Structure MYEWKLNDIVDNGLCAKCGTCVVVCPNNILEFEEVPKLTEECLRKGYGMCHDVCPRVSSG CCCEECHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC KYQISIRENFKEEHYYGKGDIEGQDGGVVSTFLKHLLENKKIDGAIVVGDECWKPVSLIV EEEEEEHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHEEE QNPEDIEKSAKSKYAVSTLEALREAGEMGIEKVAVVGLPCQIAGLRKLQYFPYLAKYDGE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHHHCCCC LGKNGKLAKLPKIEYLIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLIIITED CCCCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHEECCCCEEEEEECC EEYKIPLKDIEMNAGCKMCRDFDAEMADVSVGCVGSPDGYSTVTIRTEKGEEIKNAVELN CCCCCCHHHCCCCCCHHHHHHCCCCHHCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHC EGVELAPIEKLKELKLNRFKKELERRKENNEKISFYWLADYAGVGKRADNDYFIRVRAKP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECC AGWYSLDEVKEIVKITEKYDGKIKMTNRGGFEIHHITPFYAEDMALELAEKDLITGSEGP CCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC LVRATLACPGEGNCGSGLINTTELCSIIEDNFIEHPAPYKFKIAISGCPNKCVRPQIHEI EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHC GIAGVKFPITNEENCNGCGRCADICKVEAIDIRGDTSYTNYNICIGCGKCIKGCPNEGRD CCCEEEEECCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCEEEEEECCHHHCCCCCCCCC MKEEGFMVFVGGKSGREVIEGISMKLMSIEEIVNLIDKVLIVYHKYAQKPQRERLGAVMA CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RVGKGKFLEEVKELMEKE HHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]