Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is trxB [C]

Identifier: 150401195

GI number: 150401195

Start: 788887

End: 789801

Strand: Reverse

Name: trxB [C]

Synonym: Maeo_0766

Alternate gene names: 150401195

Gene position: 789801-788887 (Counterclockwise)

Preceding gene: 150401196

Following gene: 150401193

Centisome position: 50.32

GC content: 33.88

Gene sequence:

>915_bases
ATGGTTTATGATTTAATAATAATTGGGGCAGGTCCCGCAGGTTTAACCGCAGGGATATATGGAATGAGGGCAAAATTAAA
TATGGCATGCATCGAAAAGGAAAACGAAGGAGGGAAAATAGCCGAGGCAGGAGCCGTTGAAAATTATCCTGGATTTGAAA
ATATAAAAGGATATGAATTAGCCCAAAATTTTTCAAATCATGCAAAGAAATTTGGATTAAATATAATCCACGACAATATA
CAAAATATTGATACAACAGCAAGACCATTTAAGATAATGGGAGATAATGAAACATATAAAGCAAACGCCATAATATTGGC
AACAGGAACAAAGGATAAAAAATTAGGATTAAATGAGGACGAATTCGTAGGAAAAGGGGTAAGCTATTGCGCAACTTGCG
ATGCTTTCTTTTATGTTGGTAAAGAAGTAATTGTAGTTGGAAAAGGAACTCCTGCGGTTATGTCAGCACTAAATTTAAAA
GACATCGTAAAAAAAGTAATACTTATAACAGAAGAACCAGAAATAAAGGCTGCCGAACCAATCATGCTGGAAAGATTAAA
TAATTCAGAAAATATTGAATTAATCACAAATGCTAAACCTTTAAAAATAATTGGGGAAAATAAGGTAGAGGGGCTATTAA
TATCTTTGAATGGGGATGAAAAAGAAATAAAATCCGAGGGCATATTTATTACTATGGGACATATTCCAAATTCAGAATAT
TTGAAAGATAGTGGGATTGAATTAACAAAAAGAGGATTTGTAAAAGTGGATAAAAACTGCAAAACCAACATAGAAGGAAT
ATTCGCCTGCGGAGATATTGCAGGGGGTATTTTGCAAGTATCAAAGGCAGTTGGAGAAGGAGCTGTAGCTTTGGCAAGTG
CTTCAAGATATTTGGATAAATTGGATAGTAAATAA

Upstream 100 bases:

>100_bases
ATCTATTTAAATGAGTATTTAAACGGTAAAGAAATCACCGATTTTAACTCATTTGAAATATTTATAAAGGGGCTTTTCAA
AAAATAAAAAAGGTGAAATC

Downstream 100 bases:

>100_bases
TAAAAAAATAAAATAAAAAATAATATTTAAATTTCCATATTTTTTAATCTATTTGATATATAATTCAATATACTTTTTAG
ATTTTGATTATTATCATAAT

Product: thioredoxin reductase

Products: NA

Alternate protein names: TRXR [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYELAQNFSNHAKKFGLNIIHDNI
QNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNEDEFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLK
DIVKKVILITEEPEIKAAEPIMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY
LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDKLDSK

Sequences:

>Translated_304_residues
MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYELAQNFSNHAKKFGLNIIHDNI
QNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNEDEFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLK
DIVKKVILITEEPEIKAAEPIMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY
LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDKLDSK
>Mature_304_residues
MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYELAQNFSNHAKKFGLNIIHDNI
QNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNEDEFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLK
DIVKKVILITEEPEIKAAEPIMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY
LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDKLDSK

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787114, Length=312, Percent_Identity=38.1410256410256, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI87081763, Length=314, Percent_Identity=32.484076433121, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1786307, Length=343, Percent_Identity=22.7405247813411, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321898, Length=315, Percent_Identity=30.4761904761905, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320560, Length=321, Percent_Identity=30.5295950155763, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR005982 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.8.1.9 [H]

Molecular weight: Translated: 32751; Mature: 32751

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYEL
CEEEEEEEECCCCHHHHHHHHHHEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHH
AQNFSNHAKKFGLNIIHDNIQNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNED
HHHHHHHHHHHCCEEEECCHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCH
EFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLKDIVKKVILITEEPEIKAAEP
HHHCCCCHHHHHHHHHEEECCEEEEEECCCHHHHHHCCHHHHHHHHEEEECCCCCCCCCC
IMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY
HHHHHCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCHH
LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDK
HCCCCCEEECCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
LDSK
HCCC
>Mature Secondary Structure
MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYEL
CEEEEEEEECCCCHHHHHHHHHHEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHH
AQNFSNHAKKFGLNIIHDNIQNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNED
HHHHHHHHHHHCCEEEECCHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCH
EFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLKDIVKKVILITEEPEIKAAEP
HHHCCCCHHHHHHHHHEEECCEEEEEECCCHHHHHHCCHHHHHHHHEEEECCCCCCCCCC
IMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY
HHHHHCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCHH
LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDK
HCCCCCEEECCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
LDSK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]