| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is trxB [C]
Identifier: 150401195
GI number: 150401195
Start: 788887
End: 789801
Strand: Reverse
Name: trxB [C]
Synonym: Maeo_0766
Alternate gene names: 150401195
Gene position: 789801-788887 (Counterclockwise)
Preceding gene: 150401196
Following gene: 150401193
Centisome position: 50.32
GC content: 33.88
Gene sequence:
>915_bases ATGGTTTATGATTTAATAATAATTGGGGCAGGTCCCGCAGGTTTAACCGCAGGGATATATGGAATGAGGGCAAAATTAAA TATGGCATGCATCGAAAAGGAAAACGAAGGAGGGAAAATAGCCGAGGCAGGAGCCGTTGAAAATTATCCTGGATTTGAAA ATATAAAAGGATATGAATTAGCCCAAAATTTTTCAAATCATGCAAAGAAATTTGGATTAAATATAATCCACGACAATATA CAAAATATTGATACAACAGCAAGACCATTTAAGATAATGGGAGATAATGAAACATATAAAGCAAACGCCATAATATTGGC AACAGGAACAAAGGATAAAAAATTAGGATTAAATGAGGACGAATTCGTAGGAAAAGGGGTAAGCTATTGCGCAACTTGCG ATGCTTTCTTTTATGTTGGTAAAGAAGTAATTGTAGTTGGAAAAGGAACTCCTGCGGTTATGTCAGCACTAAATTTAAAA GACATCGTAAAAAAAGTAATACTTATAACAGAAGAACCAGAAATAAAGGCTGCCGAACCAATCATGCTGGAAAGATTAAA TAATTCAGAAAATATTGAATTAATCACAAATGCTAAACCTTTAAAAATAATTGGGGAAAATAAGGTAGAGGGGCTATTAA TATCTTTGAATGGGGATGAAAAAGAAATAAAATCCGAGGGCATATTTATTACTATGGGACATATTCCAAATTCAGAATAT TTGAAAGATAGTGGGATTGAATTAACAAAAAGAGGATTTGTAAAAGTGGATAAAAACTGCAAAACCAACATAGAAGGAAT ATTCGCCTGCGGAGATATTGCAGGGGGTATTTTGCAAGTATCAAAGGCAGTTGGAGAAGGAGCTGTAGCTTTGGCAAGTG CTTCAAGATATTTGGATAAATTGGATAGTAAATAA
Upstream 100 bases:
>100_bases ATCTATTTAAATGAGTATTTAAACGGTAAAGAAATCACCGATTTTAACTCATTTGAAATATTTATAAAGGGGCTTTTCAA AAAATAAAAAAGGTGAAATC
Downstream 100 bases:
>100_bases TAAAAAAATAAAATAAAAAATAATATTTAAATTTCCATATTTTTTAATCTATTTGATATATAATTCAATATACTTTTTAG ATTTTGATTATTATCATAAT
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYELAQNFSNHAKKFGLNIIHDNI QNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNEDEFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLK DIVKKVILITEEPEIKAAEPIMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDKLDSK
Sequences:
>Translated_304_residues MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYELAQNFSNHAKKFGLNIIHDNI QNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNEDEFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLK DIVKKVILITEEPEIKAAEPIMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDKLDSK >Mature_304_residues MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYELAQNFSNHAKKFGLNIIHDNI QNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNEDEFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLK DIVKKVILITEEPEIKAAEPIMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDKLDSK
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=312, Percent_Identity=38.1410256410256, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI87081763, Length=314, Percent_Identity=32.484076433121, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1786307, Length=343, Percent_Identity=22.7405247813411, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321898, Length=315, Percent_Identity=30.4761904761905, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320560, Length=321, Percent_Identity=30.5295950155763, Blast_Score=134, Evalue=1e-32,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 32751; Mature: 32751
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYEL CEEEEEEEECCCCHHHHHHHHHHEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHH AQNFSNHAKKFGLNIIHDNIQNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNED HHHHHHHHHHHCCEEEECCHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCH EFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLKDIVKKVILITEEPEIKAAEP HHHCCCCHHHHHHHHHEEECCEEEEEECCCHHHHHHCCHHHHHHHHEEEECCCCCCCCCC IMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY HHHHHCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCHH LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDK HCCCCCEEECCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEHHHHHHHHH LDSK HCCC >Mature Secondary Structure MVYDLIIIGAGPAGLTAGIYGMRAKLNMACIEKENEGGKIAEAGAVENYPGFENIKGYEL CEEEEEEEECCCCHHHHHHHHHHEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHH AQNFSNHAKKFGLNIIHDNIQNIDTTARPFKIMGDNETYKANAIILATGTKDKKLGLNED HHHHHHHHHHHCCEEEECCHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCH EFVGKGVSYCATCDAFFYVGKEVIVVGKGTPAVMSALNLKDIVKKVILITEEPEIKAAEP HHHCCCCHHHHHHHHHEEECCEEEEEECCCHHHHHHCCHHHHHHHHEEEECCCCCCCCCC IMLERLNNSENIELITNAKPLKIIGENKVEGLLISLNGDEKEIKSEGIFITMGHIPNSEY HHHHHCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCHH LKDSGIELTKRGFVKVDKNCKTNIEGIFACGDIAGGILQVSKAVGEGAVALASASRYLDK HCCCCCEEECCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEHHHHHHHHH LDSK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]