Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401187

Identifier: 150401187

GI number: 150401187

Start: 779965

End: 780567

Strand: Reverse

Name: 150401187

Synonym: Maeo_0758

Alternate gene names: NA

Gene position: 780567-779965 (Counterclockwise)

Preceding gene: 150401188

Following gene: 150401186

Centisome position: 49.73

GC content: 33.0

Gene sequence:

>603_bases
ATGGATGATATATTACTTCAATGCCCAATATGTGATGATGTAACGCCCCATGTTGAATTAAAACGGGAAGAATCTAAAAA
ACATTTTAAAATAACTGTAAGATGTTTAGATTGTGGGCATGTCCACCATATCGAAGAGCGAATAAAATTAAAGGATATTC
ATGTTATTATAAGTAGATATGGAGAATCCGAAAAAAAAACTATTCAATTGCCGACTGATGAAAATTTAAAAATAGGCGAT
AGGCTCGTAGTTTATGATGAGGATGTTGAAATCACGGGTATTGATACCACAAAACGAGTTTCCTCTTCAAAAGTAGAGGA
AATAACAACCCTATGGGTTAAATCTCTAAATATCCCTAAAAAAGTAGGAATATCAATAAATGATGGGGTCACTACTCATT
CGGTTAGCGTTTTAGTCCCCAATGATTATGTGTTTGACAATAAAACACTGTATCGGGTTGGAAGGTTATTTTTCAGGATA
AAGAAAATAAAAACCGAAAAAGGAACTTTTAAGCGGGAACTCGCAATAAAAATAAAGCGAATATATTCCGACTCAGCAAA
ACCACTTAGGGATTTTGAAGATTTGACTGAAAATATTGTATAA

Upstream 100 bases:

>100_bases
TTAAACCTCAGCAATTCCAAAGAGGAAGAAGATGGGGAAAAAGAAGATAAATAATCAATAAATATGACTGCGATATAGAT
TATTATATTAGTGATTAAAA

Downstream 100 bases:

>100_bases
TTCCTTATTATTATCATTATTAGTGAATAGAATACCTTATGAGGTGCAATTATGGCAAGAATGAAAGCAAGGTCTGGTAA
AGGGAGAAGAGTAGCCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRYGESEKKTIQLPTDENLKIGD
RLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPKKVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRI
KKIKTEKGTFKRELAIKIKRIYSDSAKPLRDFEDLTENIV

Sequences:

>Translated_200_residues
MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRYGESEKKTIQLPTDENLKIGD
RLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPKKVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRI
KKIKTEKGTFKRELAIKIKRIYSDSAKPLRDFEDLTENIV
>Mature_200_residues
MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRYGESEKKTIQLPTDENLKIGD
RLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPKKVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRI
KKIKTEKGTFKRELAIKIKRIYSDSAKPLRDFEDLTENIV

Specific function: Unknown

COG id: COG1326

COG function: function code R; Uncharacterized archaeal Zn-finger protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012041
- InterPro:   IPR007853 [H]

Pfam domain/function: PF05180 zf-DNL [H]

EC number: NA

Molecular weight: Translated: 23119; Mature: 23119

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRY
CCCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEECC
GESEKKTIQLPTDENLKIGDRLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPK
CCCCCEEEECCCCCCCEECCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH
KVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRIKKIKTEKGTFKRELAIKIKR
HCCEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IYSDSAKPLRDFEDLTENIV
HHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRY
CCCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEECC
GESEKKTIQLPTDENLKIGDRLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPK
CCCCCEEEECCCCCCCEECCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH
KVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRIKKIKTEKGTFKRELAIKIKR
HCCEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IYSDSAKPLRDFEDLTENIV
HHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]