| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401187
Identifier: 150401187
GI number: 150401187
Start: 779965
End: 780567
Strand: Reverse
Name: 150401187
Synonym: Maeo_0758
Alternate gene names: NA
Gene position: 780567-779965 (Counterclockwise)
Preceding gene: 150401188
Following gene: 150401186
Centisome position: 49.73
GC content: 33.0
Gene sequence:
>603_bases ATGGATGATATATTACTTCAATGCCCAATATGTGATGATGTAACGCCCCATGTTGAATTAAAACGGGAAGAATCTAAAAA ACATTTTAAAATAACTGTAAGATGTTTAGATTGTGGGCATGTCCACCATATCGAAGAGCGAATAAAATTAAAGGATATTC ATGTTATTATAAGTAGATATGGAGAATCCGAAAAAAAAACTATTCAATTGCCGACTGATGAAAATTTAAAAATAGGCGAT AGGCTCGTAGTTTATGATGAGGATGTTGAAATCACGGGTATTGATACCACAAAACGAGTTTCCTCTTCAAAAGTAGAGGA AATAACAACCCTATGGGTTAAATCTCTAAATATCCCTAAAAAAGTAGGAATATCAATAAATGATGGGGTCACTACTCATT CGGTTAGCGTTTTAGTCCCCAATGATTATGTGTTTGACAATAAAACACTGTATCGGGTTGGAAGGTTATTTTTCAGGATA AAGAAAATAAAAACCGAAAAAGGAACTTTTAAGCGGGAACTCGCAATAAAAATAAAGCGAATATATTCCGACTCAGCAAA ACCACTTAGGGATTTTGAAGATTTGACTGAAAATATTGTATAA
Upstream 100 bases:
>100_bases TTAAACCTCAGCAATTCCAAAGAGGAAGAAGATGGGGAAAAAGAAGATAAATAATCAATAAATATGACTGCGATATAGAT TATTATATTAGTGATTAAAA
Downstream 100 bases:
>100_bases TTCCTTATTATTATCATTATTAGTGAATAGAATACCTTATGAGGTGCAATTATGGCAAGAATGAAAGCAAGGTCTGGTAA AGGGAGAAGAGTAGCCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRYGESEKKTIQLPTDENLKIGD RLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPKKVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRI KKIKTEKGTFKRELAIKIKRIYSDSAKPLRDFEDLTENIV
Sequences:
>Translated_200_residues MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRYGESEKKTIQLPTDENLKIGD RLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPKKVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRI KKIKTEKGTFKRELAIKIKRIYSDSAKPLRDFEDLTENIV >Mature_200_residues MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRYGESEKKTIQLPTDENLKIGD RLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPKKVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRI KKIKTEKGTFKRELAIKIKRIYSDSAKPLRDFEDLTENIV
Specific function: Unknown
COG id: COG1326
COG function: function code R; Uncharacterized archaeal Zn-finger protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012041 - InterPro: IPR007853 [H]
Pfam domain/function: PF05180 zf-DNL [H]
EC number: NA
Molecular weight: Translated: 23119; Mature: 23119
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRY CCCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEECC GESEKKTIQLPTDENLKIGDRLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPK CCCCCEEEECCCCCCCEECCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH KVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRIKKIKTEKGTFKRELAIKIKR HCCEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IYSDSAKPLRDFEDLTENIV HHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDDILLQCPICDDVTPHVELKREESKKHFKITVRCLDCGHVHHIEERIKLKDIHVIISRY CCCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEECC GESEKKTIQLPTDENLKIGDRLVVYDEDVEITGIDTTKRVSSSKVEEITTLWVKSLNIPK CCCCCEEEECCCCCCCEECCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH KVGISINDGVTTHSVSVLVPNDYVFDNKTLYRVGRLFFRIKKIKTEKGTFKRELAIKIKR HCCEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IYSDSAKPLRDFEDLTENIV HHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]