| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is ybeX [C]
Identifier: 150401183
GI number: 150401183
Start: 775338
End: 776246
Strand: Direct
Name: ybeX [C]
Synonym: Maeo_0754
Alternate gene names: 150401183
Gene position: 775338-776246 (Clockwise)
Preceding gene: 150401182
Following gene: 150401185
Centisome position: 49.4
GC content: 32.01
Gene sequence:
>909_bases ATGGAGCTCACCATAGTTCAGAAAGAAATTCTTCAAGAATTAATTGCAATATACGAAGAAAAAAATAAAGCAGTGAAAGG GACAGAAATAGCCATTAAATTAAATAGAAACCCCGGAACAATTAGAAATCAAATGCAAGCTTTAAGGGCTTTAAATCTTG TAGATGGAGTTCCGGGACCAAAAGGAGGCTATGTTCCAACAGGTCAGGCATATAGGTCAATAGGTCTTTTATGCGATAAA AAAGACATCACTGTGCCAATATATAAAGATAATAAACCAGTAGAAGGAGTATTTGTTGAAAAAATAATATTTGATACAAT AGCTCATGAAAAATCTTGTTCTTCTATGATACATATAAGGGGAGATACCAAATTATTTAGTGCTGGAGATATTGTAAAAA TTGGACCTACTCACCACAATAAAATAACAGTTGTTGGTAAAATAGCGGGGAGAGACGATATAAACCATATATTACTAATT GATGTAATTGGAGTTATGAGTGTGCCAAATATCCCTGTGGAAAGCATATTACATAATAAAAAAGAAATGATATTTTTAAA ACCAACCGCAACAATAAGGGAGGCCTCAAAATTATTATACTCTAAAAATATCCATGGTGTGCCAATAGTTAGTGATGAAA CTAATCAACTACTTGAAGGAATTATAACACTTCACGATATTGCCAAATCTTTGGCAGAAGGACTTGAAAATGGCACAGTG GATAAAATTATGGTAAAAGATGTTATTACCATATCTACAAAAGATAAAATATTTGATGCCATTGAAAAAATGGACAAACA TAAAGTAGGTAGATTAATTGCCGTAAATGAAGATAATAAAGTTGAGGGCATTATTACTAGAACAGATATTATGGATTTAT TAAATGGAGCTCCCCTCCTAAATGTTTGA
Upstream 100 bases:
>100_bases TAAACTAAATATCATTATTTATAATCATTTGTAATTAATTATCATTATTTATAATTAATTATCTATATAATTACATATAA TAATTTGTGATGGTGTTATT
Downstream 100 bases:
>100_bases TATAATTATTAAAAAATTAAAATAATAGGAGAGGTTTGCTTAAATGCCTTCTTGCAGATACAGGCACTTCGTAAAACCCT TCAATTACATCTCTTTTTAT
Product: signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MELTIVQKEILQELIAIYEEKNKAVKGTEIAIKLNRNPGTIRNQMQALRALNLVDGVPGPKGGYVPTGQAYRSIGLLCDK KDITVPIYKDNKPVEGVFVEKIIFDTIAHEKSCSSMIHIRGDTKLFSAGDIVKIGPTHHNKITVVGKIAGRDDINHILLI DVIGVMSVPNIPVESILHNKKEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAKSLAEGLENGTV DKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDIMDLLNGAPLLNV
Sequences:
>Translated_302_residues MELTIVQKEILQELIAIYEEKNKAVKGTEIAIKLNRNPGTIRNQMQALRALNLVDGVPGPKGGYVPTGQAYRSIGLLCDK KDITVPIYKDNKPVEGVFVEKIIFDTIAHEKSCSSMIHIRGDTKLFSAGDIVKIGPTHHNKITVVGKIAGRDDINHILLI DVIGVMSVPNIPVESILHNKKEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAKSLAEGLENGTV DKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDIMDLLNGAPLLNV >Mature_302_residues MELTIVQKEILQELIAIYEEKNKAVKGTEIAIKLNRNPGTIRNQMQALRALNLVDGVPGPKGGYVPTGQAYRSIGLLCDK KDITVPIYKDNKPVEGVFVEKIIFDTIAHEKSCSSMIHIRGDTKLFSAGDIVKIGPTHHNKITVVGKIAGRDDINHILLI DVIGVMSVPNIPVESILHNKKEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAKSLAEGLENGTV DKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDIMDLLNGAPLLNV
Specific function: Unknown
COG id: COG2524
COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001807 - InterPro: IPR000644 - InterPro: IPR016436 - InterPro: IPR005104 - InterPro: IPR011991 [H]
Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]
EC number: NA
Molecular weight: Translated: 33257; Mature: 33257
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTIVQKEILQELIAIYEEKNKAVKGTEIAIKLNRNPGTIRNQMQALRALNLVDGVPGP CCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KGGYVPTGQAYRSIGLLCDKKDITVPIYKDNKPVEGVFVEKIIFDTIAHEKSCSSMIHIR CCCCCCCCHHHHHHCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE GDTKLFSAGDIVKIGPTHHNKITVVGKIAGRDDINHILLIDVIGVMSVPNIPVESILHNK CCCEEECCCCEEEECCCCCCEEEEEEEECCCCCCCEEEEEEHHHHHCCCCCCHHHHHCCC KEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAKSLAEGLENGTV CCEEEECCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDIMDLLNGAPLL HHEEEEHEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEHHHHHHHHCCCCCC NV CC >Mature Secondary Structure MELTIVQKEILQELIAIYEEKNKAVKGTEIAIKLNRNPGTIRNQMQALRALNLVDGVPGP CCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KGGYVPTGQAYRSIGLLCDKKDITVPIYKDNKPVEGVFVEKIIFDTIAHEKSCSSMIHIR CCCCCCCCHHHHHHCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE GDTKLFSAGDIVKIGPTHHNKITVVGKIAGRDDINHILLIDVIGVMSVPNIPVESILHNK CCCEEECCCCEEEECCCCCCEEEEEEEECCCCCCCEEEEEEHHHHHCCCCCCHHHHHCCC KEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAKSLAEGLENGTV CCEEEECCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDIMDLLNGAPLL HHEEEEHEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEHHHHHHHHCCCCCC NV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]