Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401170

Identifier: 150401170

GI number: 150401170

Start: 761147

End: 762541

Strand: Direct

Name: 150401170

Synonym: Maeo_0741

Alternate gene names: NA

Gene position: 761147-762541 (Clockwise)

Preceding gene: 150401159

Following gene: 150401171

Centisome position: 48.5

GC content: 31.11

Gene sequence:

>1395_bases
ATGATGATAGAAATAGGCACAACAAAATATGTTATTTATGCAAAAGTTATAGTTGATGGATATGTTGAAAAACATGATAT
TATTGGAGCAATATTTGGTCAAACCGAAGGACTTTTAGGAAGCGACCTTGATTTAAGGGACCTCCAAAAAAGTGGAAGAA
TTGGGAGGATAGATGTTGAACTTGAAAATATAAATGGAAAATCATACGCAAAACTAATTTTTCCATCTAGTTTAGACAGA
GTTGAAACAGCAATAATTGCTGCCACAATTGAAACACTTGATAGAGTAGGGCCATGTATTGCAACAATTAAAGTATTAAA
TATAGAAGACATAAGAATCAAAAAGAGACAATATATTACGGATAGGGCAAAAGAACTTTTAAAATCAATAGTTGATACTA
CAATAGATACCTACGAAATAGCCGAAGAAATAAAGGAATTCGTAAGGTCAGAAGAAATAATCGAGATGGGAAATGAAAAG
TTACCATCTGGCCCAAATGTTGAGGATTCAGATACCATAATTATTGTTGAAGGGCGTGCTGATGTTCTAAATTTATTACG
ATGTGGCATAAAAAATGCCATAGCGGTTGGAGGAACATCCATTCCAGAATCCATTATAGAATTATCTAAGAAAAAAACCA
CCACAATATTTACAGACGGGGACCGCGGGGGAGAACTAATATTAAAAGAGGCCATTCAAACTTGCGATATCGATTATGTA
GCCAGAGCTCCGAAGGGTAGGGAAGTAGAGGAGCTCACCAAAAAAGAAGTGGTAAAATATTTAAGGTCCAAAATACCAAT
AGAACAATATATTCAATTTCATTCCAACAAATGTAACGAATTATTAAAAAAAAGCAAAGAATATAGGAGTAATACCATAA
ATAACAATAATGACAGTGGTAAAATATCAATTGATTCAATAATCTCTGAAAACGCGACAAACGATATAGGGGAGCTCCCT
GTATCCAAAACTTCGAAAAATGAAAGGAATAATACCAAGGTTATTGACGAAAATATTGAGAAAAATAATCAAAATATAAA
AGAAGACAATAATATAGAGATTAAACAAAGCGATATTTCTGAAATATTAAAAAAAGATTGTTCTGAACAGTGGGAATATA
TTGAATCACTATTAAATGACATATCCAACACAGACAATATAAAAATAATAACCAACGACAATATTATAAAAACCATACAT
TACAGCGAATTAGATAAAATAGATAAATCAGATATTCAAATGGTTATGTCAGATATGCCAATTACTCAAAAAATAACAGA
TTTATTCCATGAATGTTCTCCGATAATAATTGGAAGAGATATAAATATTACAAAAAAACCGGCAAAGTTAAAAGTTTTTT
CTCATGACATGCTAAAAAACATGGTATGTTTATAG

Upstream 100 bases:

>100_bases
TTATATATATTTAAAATTAGTTGAATTGTTATATTATATACTATGTAGATATTATATATTATTATATTATGTGAGACTGG
CAGGGAGTTGGAGGGATAAT

Downstream 100 bases:

>100_bases
TTAATAGCGAAACATGTGGTATCGAAATCTCTGATTTCGAGTAATAATAATCGGAGATTTTTATCTGATGTTATGTCAAA
ACATGGAGCTCCCGGTATAA

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVELENINGKSYAKLIFPSSLDR
VETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYITDRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEK
LPSGPNVEDSDTIIIVEGRADVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV
ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSGKISIDSIISENATNDIGELP
VSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDISEILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIH
YSELDKIDKSDIQMVMSDMPITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL

Sequences:

>Translated_464_residues
MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVELENINGKSYAKLIFPSSLDR
VETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYITDRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEK
LPSGPNVEDSDTIIIVEGRADVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV
ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSGKISIDSIISENATNDIGELP
VSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDISEILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIH
YSELDKIDKSDIQMVMSDMPITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL
>Mature_464_residues
MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVELENINGKSYAKLIFPSSLDR
VETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYITDRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEK
LPSGPNVEDSDTIIIVEGRADVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV
ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSGKISIDSIISENATNDIGELP
VSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDISEILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIH
YSELDKIDKSDIQMVMSDMPITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y741_META3 (A6UV02)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324936.1
- ProteinModelPortal:   A6UV02
- SMR:   A6UV02
- STRING:   A6UV02
- GeneID:   5327752
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0741
- eggNOG:   arNOG04629
- HOGENOM:   HBG541216
- OMA:   QTCDIDY
- ProtClustDB:   PRK04031
- BioCyc:   MAEO419665:MAEO_0741-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 52357; Mature: 52357

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVE
CEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEE
LENINGKSYAKLIFPSSLDRVETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYIT
EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHEEEEECCHHHHHHHHHHHH
DRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEKLPSGPNVEDSDTIIIVEGRA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCH
DVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHH
ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSG
HCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KISIDSIISENATNDIGELPVSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDIS
CEEHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCEEEEHHHHH
EILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIHYSELDKIDKSDIQMVMSDMP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHCCC
ITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL
HHHHHHHHHHCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVE
CEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEE
LENINGKSYAKLIFPSSLDRVETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYIT
EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHEEEEECCHHHHHHHHHHHH
DRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEKLPSGPNVEDSDTIIIVEGRA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCH
DVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHH
ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSG
HCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KISIDSIISENATNDIGELPVSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDIS
CEEHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCEEEEHHHHH
EILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIHYSELDKIDKSDIQMVMSDMP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHCCC
ITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL
HHHHHHHHHHCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA