| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is dtdA
Identifier: 150401162
GI number: 150401162
Start: 751099
End: 751902
Strand: Reverse
Name: dtdA
Synonym: Maeo_0733
Alternate gene names: 150401162
Gene position: 751902-751099 (Counterclockwise)
Preceding gene: 150401163
Following gene: 150401161
Centisome position: 47.91
GC content: 26.99
Gene sequence:
>804_bases ATGAAATATTTATTTATAAATTCTTCAAAAGATAAAGCTGGAATAAATATAAGAAACAATTTAGAAAAATTAAATAATAT AAATAATAACTGTATAATTGATTTTTTTGAAACTCCTAAAAAATTAACAGAATTATCCAAAAAAGACCTCCCCCAAGATT ATGATTATTATATTTTTTTATCCAAACATAGAAGTGTTAGTGAAAAACCAACTTTAACAGTTCATACCTCTGGAAATTTA ACAACAGACAACAGCCACGGCGGAAATATTGAGGAGGTTTGTTGCTGTGATGCTATTTTAAACACTATTTTATTAGTAAA TATCAATAAATACAATAATTTAGAAAAATATAAAAAATTAGGTTTTGATGTTTCATTTGAGGCAATCCACCATGCACCAA CTGATTTAGATGTCCCCTCTGTTTTTGTTGAAATAGGGAGCTCCGAAAAAGAATGGGCAATAGATGAGGCAGGAGAAATA ATGGCAAATGCCATAATTGATACCATATCATCAATTGAATCAAAATCTTATAAAAAATTGGATAAGGTGATAGCCTTTGG CGGAGGGCATTATGCCCCAAGATTTACAAAATTATCATTATCAAATAAATGTTTCGTCGGATATATAATTCCAAAATATG CAAAAATATCTGAAAAGGTGCTACAACAGTTAATTCAGATGCAAGATTTTGACTATATATTATTTGACTGGAAAGGTATA AATAGCGAAGATAAAAAAAGATATATTGAATTTTTTGATAAAAATAATATTTTATGGAAAAAAGTTAAAGATTTATGTTA TTAA
Upstream 100 bases:
>100_bases TGTAATAACTGGGTTTAAAATACTTATTAAACTCATATTCCATAAACTGCATTAATATATTAATATGCCAATATATATAA TAAATAAAATAAGGGAAAAA
Downstream 100 bases:
>100_bases TTTATATATATTATATATACATATAATATATATTAATAATATATGGCGTATTTAGGAACTCATTGATAAATATAGTTAAT CTTCAATAACTGTCCCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFLSKHRSVSEKPTLTVHTSGNL TTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKLGFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEI MANAIIDTISSIESKSYKKLDKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI NSEDKKRYIEFFDKNNILWKKVKDLCY
Sequences:
>Translated_267_residues MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFLSKHRSVSEKPTLTVHTSGNL TTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKLGFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEI MANAIIDTISSIESKSYKKLDKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI NSEDKKRYIEFFDKNNILWKKVKDLCY >Mature_267_residues MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFLSKHRSVSEKPTLTVHTSGNL TTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKLGFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEI MANAIIDTISSIESKSYKKLDKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI NSEDKKRYIEFFDKNNILWKKVKDLCY
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)
COG id: COG1650
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dtdA deacylase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DTDA_META3 (A6UUZ4)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324928.1 - ProteinModelPortal: A6UUZ4 - SMR: A6UUZ4 - STRING: A6UUZ4 - GeneID: 5326599 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0733 - eggNOG: arNOG10590 - HOGENOM: HBG626914 - OMA: MAVERNT - ProtClustDB: PRK03995 - BioCyc: MAEO419665:MAEO_0733-MONOMER - HAMAP: MF_00562 - InterPro: IPR007508 - InterPro: IPR018033 - PIRSF: PIRSF016210
Pfam domain/function: PF04414 tRNA_deacylase
EC number: NA
Molecular weight: Translated: 30685; Mature: 30685
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFL CEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHCCCCCCCEEEEE SKHRSVSEKPTLTVHTSGNLTTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKL ECCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHC GFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEIMANAIIDTISSIESKSYKKL CCCCEEHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI HHHHEECCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCC NSEDKKRYIEFFDKNNILWKKVKDLCY CCHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFL CEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHCCCCCCCEEEEE SKHRSVSEKPTLTVHTSGNLTTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKL ECCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHC GFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEIMANAIIDTISSIESKSYKKL CCCCEEHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI HHHHEECCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCC NSEDKKRYIEFFDKNNILWKKVKDLCY CCHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA