| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401143
Identifier: 150401143
GI number: 150401143
Start: 733259
End: 733993
Strand: Direct
Name: 150401143
Synonym: Maeo_0714
Alternate gene names: NA
Gene position: 733259-733993 (Clockwise)
Preceding gene: 150401142
Following gene: 150401144
Centisome position: 46.72
GC content: 32.38
Gene sequence:
>735_bases ATGGGACGAAGATGGACTGCATATAAAATACACCCTAACGAAGTGTTAGATAACGAATTTAGTGAAAAAGCCCTTATTGT AGATGGAAACAAGATATATAAAGTTAGATTGATGGGGAAAGTGCAAAACCTTAAAGATAATTCGAACAATATCTTTTTTG AAATTGATGGAGTATCAATAAGAGATTTTGATAAAAAATCAAAGGACATTAAGGAAGAGGATTTTGTGGATATTATCGGA AGAGTCGGAGAATATGAAGGAAGTAGATATGTTGCATTAGAAATTTGTAAAAAAATAACCGATAATCTACCCAACTCTGA GAGTTGTGAAGTTTCTGGCGAAACTCTACCCAATTCAGAGAATTGTGAAGTTTCTGGCGAAACTCTACCCAATTCAGAGA ATTGTGAAGTTTCTGGCGAAACTATCAATAAATGGAAAGAACTAAGAGCTCTTGAAATAGAAAAAACAAGAAAATATATG GAAGATGAAGAAGAATCCCAATATCAACCTAAACAATCCTCAACAGCAGAAGAAGAAGTTTTAGAGGATTTATATGAATC TAATGATATGAAAAATGAAGTAATGGACATAATTAAAGAACAAGAAGGTATCTCGTATGAGAAATTATTGGAATCCGTTG ATATTGGTGAAGAGGAACTCGATAAAATATTGGAAGAATTAATTGACGATGGAGAAATCTACGAACCAACTCCTGGAATT TATAAGGAATTATAA
Upstream 100 bases:
>100_bases ATATTTATGATATAATACAATAAATAATTATAATTTATATCACTAATTCATGTTACAATTTAAAATATATATTAAAAATA TAACGATATAAAGTGAAACT
Downstream 100 bases:
>100_bases TTTATGCGGGCGATATTTTGAAAAATAAAAATATATATTTAATATTTGGGGCCTTGGTAGCATTATTGATATTATTATCT GTTGGGGCTCTAACAATGGC
Product: nucleic acid binding OB-fold tRNA/helicase-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGRRWTAYKIHPNEVLDNEFSEKALIVDGNKIYKVRLMGKVQNLKDNSNNIFFEIDGVSIRDFDKKSKDIKEEDFVDIIG RVGEYEGSRYVALEICKKITDNLPNSESCEVSGETLPNSENCEVSGETLPNSENCEVSGETINKWKELRALEIEKTRKYM EDEEESQYQPKQSSTAEEEVLEDLYESNDMKNEVMDIIKEQEGISYEKLLESVDIGEEELDKILEELIDDGEIYEPTPGI YKEL
Sequences:
>Translated_244_residues MGRRWTAYKIHPNEVLDNEFSEKALIVDGNKIYKVRLMGKVQNLKDNSNNIFFEIDGVSIRDFDKKSKDIKEEDFVDIIG RVGEYEGSRYVALEICKKITDNLPNSESCEVSGETLPNSENCEVSGETLPNSENCEVSGETINKWKELRALEIEKTRKYM EDEEESQYQPKQSSTAEEEVLEDLYESNDMKNEVMDIIKEQEGISYEKLLESVDIGEEELDKILEELIDDGEIYEPTPGI YKEL >Mature_243_residues GRRWTAYKIHPNEVLDNEFSEKALIVDGNKIYKVRLMGKVQNLKDNSNNIFFEIDGVSIRDFDKKSKDIKEEDFVDIIGR VGEYEGSRYVALEICKKITDNLPNSESCEVSGETLPNSENCEVSGETLPNSENCEVSGETINKWKELRALEIEKTRKYME DEEESQYQPKQSSTAEEEVLEDLYESNDMKNEVMDIIKEQEGISYEKLLESVDIGEEELDKILEELIDDGEIYEPTPGIY KEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PCI domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28134; Mature: 28003
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRWTAYKIHPNEVLDNEFSEKALIVDGNKIYKVRLMGKVQNLKDNSNNIFFEIDGVSI CCCCEEEEEECCHHHHCCCCCCCEEEEECCEEEEEEEECHHHCCCCCCCEEEEEECCCEE RDFDKKSKDIKEEDFVDIIGRVGEYEGSRYVALEICKKITDNLPNSESCEVSGETLPNSE ECCCCHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCEECCCCCCCCC NCEVSGETLPNSENCEVSGETINKWKELRALEIEKTRKYMEDEEESQYQPKQSSTAEEEV CCEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHH LEDLYESNDMKNEVMDIIKEQEGISYEKLLESVDIGEEELDKILEELIDDGEIYEPTPGI HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCH YKEL HHCC >Mature Secondary Structure GRRWTAYKIHPNEVLDNEFSEKALIVDGNKIYKVRLMGKVQNLKDNSNNIFFEIDGVSI CCCEEEEEECCHHHHCCCCCCCEEEEECCEEEEEEEECHHHCCCCCCCEEEEEECCCEE RDFDKKSKDIKEEDFVDIIGRVGEYEGSRYVALEICKKITDNLPNSESCEVSGETLPNSE ECCCCHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCEECCCCCCCCC NCEVSGETLPNSENCEVSGETINKWKELRALEIEKTRKYMEDEEESQYQPKQSSTAEEEV CCEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHH LEDLYESNDMKNEVMDIIKEQEGISYEKLLESVDIGEEELDKILEELIDDGEIYEPTPGI HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCH YKEL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]