| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401125
Identifier: 150401125
GI number: 150401125
Start: 713957
End: 715495
Strand: Direct
Name: 150401125
Synonym: Maeo_0696
Alternate gene names: NA
Gene position: 713957-715495 (Clockwise)
Preceding gene: 150401124
Following gene: 150401127
Centisome position: 45.49
GC content: 30.08
Gene sequence:
>1539_bases ATGTATTATATCCATAAAGAAATAAAAAACCCATTAAAAGATGGAATTGAATTAGCAGAAGAATTGCAAAATAATATTGA AGACCCATCTTTGATGATTTTAGTAACTTCGATAACCAAAAAAGAAAAAATTGAGGAGCTCCTAACGGGATTAAAACAAA ACCTTCGTTTAGATAATTTAATAGGTTGCACCACCGCAGGTGAATTTTCAGAGAACTATGAAACAAAACAGGGAGCTCTT TTGTTAGCATTTAATAAATCATGTAAGGTGGCAGTGGGTCGTATGCCACAGGGGACACCTGCCCGAGAAAATGGTAGTTT ATTGGCAGAAGATATAAATCAGAAATTAACAGAAAAATATCCTAAAATTGACATGCATGAAAAATTTTTAGGATTTGTAT TTCACGATTGGAATGATGACGATGAAAATGAGGTAATAGAAGGATTATCCAGCAAACTGTCCTTTCCAATAATCGGCGGA ACAGCTGCGGACAGTATGGAATTCAAAAACATGTATCAAATATATCAAGATAAAGTATTATCGAACCATACTGTATTTGG GGCAGTATCTCCGAAAAAGAAATTTAACATATTATATGGTCATGGATATGAACCGACCGAATATTATGCTAGAGTTACTA AAACTGATGGATATATCATAGAGGAACTCGATGGAAAACCAGCTTATGAAGTATATTCTAAAATGGTTAGCAATATATTA AATGTACCATTAGAAACCATTAATAAATATATACCAAATGAAAACAGCAATCTGGATTTTACGATATTATATCCTCCAGG AATTCAAGATATTTATGGACATCATAAATTATTATTTATAAAAAAGATAGAGAATAATAATATAATAGTTAGCCAGAGGA TTAAAGAAGGGACATTTCTCACATTAATGAAAACATCAGTACAAAAAACCAAAGAATCATTAATTCATGAAATCCAGAAA AAAACCAGAGGATTTAAACTACCATTTACATTTATTATAGAATGTGTGGCCCGTAAAATTATAAAAAATCCAAAAGCATT TGAACACCCCTTCGTTTCAGAGGATTTTGAAAAATGGATTAGTCCGAATGAAAATATATTAAATGAAAAAGAAGTATTTA AAACCTGCATAGGATTCAACAGCTATGGAGAAAGTATTGTAAATGGGGTTATGAGATTCCACAATGCCCTCACTTTTACA GGCGTATCTTTTGATTTAGAGAGCACATCTAAAATTAACTGGAAATCTAGTTTAAAATATTTTGAATTCAGCGAAGAAGA ATTAAAAATAATACTGGAATTAATAGATTCAAGATTAAGTGCAAAAGACTTGTTGAAAAGATTGGACCTGTCCCAGACTA AACTTTACGCTACATTAAATGACTTAGAAGATAGGAATATTATAAAATCGCAAGGTAAAAATCCAAAGAAATATTATATT GAAAATATATTAAAGGTATTAAAAGATGTTTCCGATAGATTGGATTGTCAGTACCAATATAAAAAAGAAAAAAGAAATAA ATTATTATCTAAATTCTAA
Upstream 100 bases:
>100_bases TTTATCAAGTCAGGAAGAAGGATTTTTAATGGGCTAACTTCCGAAGTTGTGTTATATGGGATTATTAAAATACATACACA GATTTAAAGAGAGGAATATT
Downstream 100 bases:
>100_bases CATATTTATTAGTTAATAATTTTAAGGTAATATTTATACATGTATTTTTTTTATATCTTACAGTATTTTCAAAATAAAAA AAATCGAAAACTATATATAT
Product: transcriptional regulator, TrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MYYIHKEIKNPLKDGIELAEELQNNIEDPSLMILVTSITKKEKIEELLTGLKQNLRLDNLIGCTTAGEFSENYETKQGAL LLAFNKSCKVAVGRMPQGTPARENGSLLAEDINQKLTEKYPKIDMHEKFLGFVFHDWNDDDENEVIEGLSSKLSFPIIGG TAADSMEFKNMYQIYQDKVLSNHTVFGAVSPKKKFNILYGHGYEPTEYYARVTKTDGYIIEELDGKPAYEVYSKMVSNIL NVPLETINKYIPNENSNLDFTILYPPGIQDIYGHHKLLFIKKIENNNIIVSQRIKEGTFLTLMKTSVQKTKESLIHEIQK KTRGFKLPFTFIIECVARKIIKNPKAFEHPFVSEDFEKWISPNENILNEKEVFKTCIGFNSYGESIVNGVMRFHNALTFT GVSFDLESTSKINWKSSLKYFEFSEEELKIILELIDSRLSAKDLLKRLDLSQTKLYATLNDLEDRNIIKSQGKNPKKYYI ENILKVLKDVSDRLDCQYQYKKEKRNKLLSKF
Sequences:
>Translated_512_residues MYYIHKEIKNPLKDGIELAEELQNNIEDPSLMILVTSITKKEKIEELLTGLKQNLRLDNLIGCTTAGEFSENYETKQGAL LLAFNKSCKVAVGRMPQGTPARENGSLLAEDINQKLTEKYPKIDMHEKFLGFVFHDWNDDDENEVIEGLSSKLSFPIIGG TAADSMEFKNMYQIYQDKVLSNHTVFGAVSPKKKFNILYGHGYEPTEYYARVTKTDGYIIEELDGKPAYEVYSKMVSNIL NVPLETINKYIPNENSNLDFTILYPPGIQDIYGHHKLLFIKKIENNNIIVSQRIKEGTFLTLMKTSVQKTKESLIHEIQK KTRGFKLPFTFIIECVARKIIKNPKAFEHPFVSEDFEKWISPNENILNEKEVFKTCIGFNSYGESIVNGVMRFHNALTFT GVSFDLESTSKINWKSSLKYFEFSEEELKIILELIDSRLSAKDLLKRLDLSQTKLYATLNDLEDRNIIKSQGKNPKKYYI ENILKVLKDVSDRLDCQYQYKKEKRNKLLSKF >Mature_512_residues MYYIHKEIKNPLKDGIELAEELQNNIEDPSLMILVTSITKKEKIEELLTGLKQNLRLDNLIGCTTAGEFSENYETKQGAL LLAFNKSCKVAVGRMPQGTPARENGSLLAEDINQKLTEKYPKIDMHEKFLGFVFHDWNDDDENEVIEGLSSKLSFPIIGG TAADSMEFKNMYQIYQDKVLSNHTVFGAVSPKKKFNILYGHGYEPTEYYARVTKTDGYIIEELDGKPAYEVYSKMVSNIL NVPLETINKYIPNENSNLDFTILYPPGIQDIYGHHKLLFIKKIENNNIIVSQRIKEGTFLTLMKTSVQKTKESLIHEIQK KTRGFKLPFTFIIECVARKIIKNPKAFEHPFVSEDFEKWISPNENILNEKEVFKTCIGFNSYGESIVNGVMRFHNALTFT GVSFDLESTSKINWKSSLKYFEFSEEELKIILELIDSRLSAKDLLKRLDLSQTKLYATLNDLEDRNIIKSQGKNPKKYYI ENILKVLKDVSDRLDCQYQYKKEKRNKLLSKF
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR002831 - InterPro: IPR011991 [H]
Pfam domain/function: PF08495 FIST; PF10442 FIST_C; PF01978 TrmB [H]
EC number: NA
Molecular weight: Translated: 59092; Mature: 59092
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYIHKEIKNPLKDGIELAEELQNNIEDPSLMILVTSITKKEKIEELLTGLKQNLRLDNL CCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHH IGCTTAGEFSENYETKQGALLLAFNKSCKVAVGRMPQGTPARENGSLLAEDINQKLTEKY CCCCCCCCCHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC PKIDMHEKFLGFVFHDWNDDDENEVIEGLSSKLSFPIIGGTAADSMEFKNMYQIYQDKVL CCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHH SNHTVFGAVSPKKKFNILYGHGYEPTEYYARVTKTDGYIIEELDGKPAYEVYSKMVSNIL CCCEEEEECCCCCCEEEEEECCCCHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHH NVPLETINKYIPNENSNLDFTILYPPGIQDIYGHHKLLFIKKIENNNIIVSQRIKEGTFL HCCHHHHHHHCCCCCCCEEEEEEECCCCHHHCCCCEEEEEEEECCCCEEEEEECCCCCEE TLMKTSVQKTKESLIHEIQKKTRGFKLPFTFIIECVARKIIKNPKAFEHPFVSEDFEKWI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHC SPNENILNEKEVFKTCIGFNSYGESIVNGVMRFHNALTFTGVSFDLESTSKINWKSSLKY CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECEEEECCCCCCCCHHHCCCH FEFSEEELKIILELIDSRLSAKDLLKRLDLSQTKLYATLNDLEDRNIIKSQGKNPKKYYI HCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHH ENILKVLKDVSDRLDCQYQYKKEKRNKLLSKF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MYYIHKEIKNPLKDGIELAEELQNNIEDPSLMILVTSITKKEKIEELLTGLKQNLRLDNL CCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHH IGCTTAGEFSENYETKQGALLLAFNKSCKVAVGRMPQGTPARENGSLLAEDINQKLTEKY CCCCCCCCCHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC PKIDMHEKFLGFVFHDWNDDDENEVIEGLSSKLSFPIIGGTAADSMEFKNMYQIYQDKVL CCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHH SNHTVFGAVSPKKKFNILYGHGYEPTEYYARVTKTDGYIIEELDGKPAYEVYSKMVSNIL CCCEEEEECCCCCCEEEEEECCCCHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHH NVPLETINKYIPNENSNLDFTILYPPGIQDIYGHHKLLFIKKIENNNIIVSQRIKEGTFL HCCHHHHHHHCCCCCCCEEEEEEECCCCHHHCCCCEEEEEEEECCCCEEEEEECCCCCEE TLMKTSVQKTKESLIHEIQKKTRGFKLPFTFIIECVARKIIKNPKAFEHPFVSEDFEKWI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHC SPNENILNEKEVFKTCIGFNSYGESIVNGVMRFHNALTFTGVSFDLESTSKINWKSSLKY CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECEEEECCCCCCCCHHHCCCH FEFSEEELKIILELIDSRLSAKDLLKRLDLSQTKLYATLNDLEDRNIIKSQGKNPKKYYI HCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHH ENILKVLKDVSDRLDCQYQYKKEKRNKLLSKF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]