| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401117
Identifier: 150401117
GI number: 150401117
Start: 706037
End: 706636
Strand: Reverse
Name: 150401117
Synonym: Maeo_0687
Alternate gene names: NA
Gene position: 706636-706037 (Counterclockwise)
Preceding gene: 150401121
Following gene: 150401111
Centisome position: 45.02
GC content: 28.83
Gene sequence:
>600_bases ATGGACAATAAAAAAAAGAAAGGAACATGGGATAGAGGGTTGGATTTTGATAAAACATACAATTTATTTGTTGAAGAAAT TGAAAGAATCAAGGAAACAGGGTTAAAATATAAAAAAGATATAAAAAGCATAGCTTATTTAATAATTGCCCTATTTCAGT TAAGAAATGGTTGTAGGATAGGAGAGGCAATTGAGGGTATATTGTGGATATGTAAAAATAAAGATAAAATAAACTGGAAT AAACCAATTGAAGTTTCGGTAAAAGTGGAAAAAACAAAAAAGAGCATAGCATATAGGGATATGTATTTTCCGTCAATGGT TAAAAAAGAAGATATTGAATTGATAAGGGGTGTAATATTAGATTTAGAAAATGCAAAAAAACCAAGAATGAGGATTTATC AATGGTTAAGAAATCATTATGGAATCAACACTCACTCATTACGATATGCATTTATAACAAAATTTGCTGAAATGAATACC TCGCCACAACTAATCGCAAAAATGACAGGACATGTTAATTTAAATCATCTTATTACTTATACGCAAGAAAAAACTGCCAA TAGGATGTTGCGAGATTTAGAAATACATATAACACGATAA
Upstream 100 bases:
>100_bases TCAGAAATTTTTTACCAACTATTGCCTTATGGTTCATAAGGCAACATTTTTATATATTATCAAATAATAATATAAAATAA CAATAAATATTGGTGATAAT
Downstream 100 bases:
>100_bases ATAAAAAAGAAATAAATATATAACTATATATTATAGTGATAGGAGCTCCCAAAACACACATGCCTATGTCATATTATTGT ATATTTTGCACATCTCTTTG
Product: phage integrase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRIGEAIEGILWICKNKDKINWN KPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVILDLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNT SPQLIAKMTGHVNLNHLITYTQEKTANRMLRDLEIHITR
Sequences:
>Translated_199_residues MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRIGEAIEGILWICKNKDKINWN KPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVILDLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNT SPQLIAKMTGHVNLNHLITYTQEKTANRMLRDLEIHITR >Mature_199_residues MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRIGEAIEGILWICKNKDKINWN KPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVILDLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNT SPQLIAKMTGHVNLNHLITYTQEKTANRMLRDLEIHITR
Specific function: Unknown
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011010 - InterPro: IPR013762 - InterPro: IPR002104 [H]
Pfam domain/function: PF00589 Phage_integrase [H]
EC number: NA
Molecular weight: Translated: 23612; Mature: 23612
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH GEAIEGILWICKNKDKINWNKPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVIL HHHHHHHHHEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH DLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNTSPQLIAKMTGHVNLNHLITY HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEE TQEKTANRMLRDLEIHITR HHHHHHHHHHHHHEEEECC >Mature Secondary Structure MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH GEAIEGILWICKNKDKINWNKPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVIL HHHHHHHHHEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH DLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNTSPQLIAKMTGHVNLNHLITY HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEE TQEKTANRMLRDLEIHITR HHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]