| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is ilvD
Identifier: 150401110
GI number: 150401110
Start: 697171
End: 698823
Strand: Reverse
Name: ilvD
Synonym: Maeo_0680
Alternate gene names: 150401110
Gene position: 698823-697171 (Counterclockwise)
Preceding gene: 150401111
Following gene: 150401109
Centisome position: 44.53
GC content: 37.51
Gene sequence:
>1653_bases ATGATAAGTGATAACTTAAAGAAGGGAGTTTCCAGAGCTCCAAACAGAAGTTTATTAAAGGCATGCGGATATACGGACGA AGAAATAGAAAAACCATTCATAGGTATAGTAAATAGCTTTACAGAAGTAGTTCCCGGGCATATTCATTTAAATACATTGG CAGAAGCTGCAAAAAAGGGAGTTTATGCAAACGGCGGAACACCTTTTGAATTTAACACTATGGCCGTATGTGATGGTATA GCTATGGGACATGAGGGAATGAGATATTCATTACCATCAAGAGAGATAATAGCTGATACAGTAGAAAGTATGGCGAAAGC TCATGGATTTGATGGATTGGTGCTTATTCCGTCCTGTGATAAAATTGTTCCTGGTATGATTATGGGGGCTCTAAGATTAA ATATTCCATTCATAGTAATAACTGGCGGACCTATGCAACCTGGGGAGCTCCACGGTAAAAAGTATGACCTTATAAGTGTG TTTGAAGGAGTTGGAGAATATAATGTTGGAAAAATTACAAAAGAGGAATTAATGGAAATTGAAACCTGTGCCTGTCCGGG AGCTGGTAGCTGTGCTGGATTATTTACGGCAAATAGTATGGCCTGTTTAACCGAAACACTTGGTTTATCCCTTCCTATGT GTGCTACTACACATGCAACAGATGCCGAAAAGGTGAGAATTGCAAAAAGAAGCGGTATGAAAATAGTTGATTTGGTAAAA GAAGATATAAAACCAACAGATTTATTAACAAAGGAATCATTTGAAAATGCAATATTGGTTGATTTGGCTTTGGGAGGTTC TTCAAATACAACACTTCATATTCCAGCTTTGGCTTATGAAATAGCACCAGAGTTTATAACTCTTGACGATTTTGATAGGT TATGCGACGAGGTGCCACATATTGCTTCATTAAGGCCGGGGGGAGACCACTTTATAAGCGATTTGCATAGGGCAGGAGGT ATTCCAGCTGTTTTAAAAATATTGGAGCAAAAAATAAGGGATGCTAACACTGTAAGCGGTAAATCTATTAAAGAGATAAT AAATGAGGTAAAATACATTGATTATAATATAATTAGACCAGTGGATAAACCAGTGCATGAGACCGCAGGATTAAGGATAT TAAAAGGAAATATAGCACCTGATGGCTGTGTTGTAAAAATTAGTGCTGTAAATCCAAAGATGTATAAACACGAGGGGCCT GCACGGGTATTTAATTCAGAGGAGGAAACCATTGACGCAATACTTGGGGGGGACATTAAAGAAGGAGATGTTGTTGTAAT AAGATATGAAGGTCCAGCAGGAGGTCCGGGAATGAGAGAAATGTTGTCTCCAACTTCTGCTATTTGTGGTATGGGATTAG ATGACTCTGTTGCACTTATTACAGATGGTAGATTTAGTGGGGGAAGTAGAGGTCCATGTATTGGACATATCTCACCAGAG GCAATGGCAGGAGGTCCAATAGCCATAATTGAAGAAGGAGATATAATTGCTATTGATATGATGGCAAAAGAAATAAACTT AAAAATAAGCGAAGAAGAGATAAAAGAAAGATTAGCTAATTGGAAAAAACCAGAAATAAAAGTTAAAAAAGGATATATAT CAAGATATGCTAAATTAGTATCTTCGGCAAATGAAGGGGCAGTATTGAAATAA
Upstream 100 bases:
>100_bases CAAAGAATTTTATAAAAATATTTTAATATTATTAATTAGCTTTTATATAGTATATACATTTTTAATTTTTTATATTTCAT TTTTTTTATATGGTGATAAT
Downstream 100 bases:
>100_bases CAAATGACTATCATATTTTTTATTTTTATATAATATTTCTATTTTTTTATTTTTTATTTTTTATTTTTGCTATTTTATTA TAAAATCGTTGAAAACTCCA
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MISDNLKKGVSRAPNRSLLKACGYTDEEIEKPFIGIVNSFTEVVPGHIHLNTLAEAAKKGVYANGGTPFEFNTMAVCDGI AMGHEGMRYSLPSREIIADTVESMAKAHGFDGLVLIPSCDKIVPGMIMGALRLNIPFIVITGGPMQPGELHGKKYDLISV FEGVGEYNVGKITKEELMEIETCACPGAGSCAGLFTANSMACLTETLGLSLPMCATTHATDAEKVRIAKRSGMKIVDLVK EDIKPTDLLTKESFENAILVDLALGGSSNTTLHIPALAYEIAPEFITLDDFDRLCDEVPHIASLRPGGDHFISDLHRAGG IPAVLKILEQKIRDANTVSGKSIKEIINEVKYIDYNIIRPVDKPVHETAGLRILKGNIAPDGCVVKISAVNPKMYKHEGP ARVFNSEEETIDAILGGDIKEGDVVVIRYEGPAGGPGMREMLSPTSAICGMGLDDSVALITDGRFSGGSRGPCIGHISPE AMAGGPIAIIEEGDIIAIDMMAKEINLKISEEEIKERLANWKKPEIKVKKGYISRYAKLVSSANEGAVLK
Sequences:
>Translated_550_residues MISDNLKKGVSRAPNRSLLKACGYTDEEIEKPFIGIVNSFTEVVPGHIHLNTLAEAAKKGVYANGGTPFEFNTMAVCDGI AMGHEGMRYSLPSREIIADTVESMAKAHGFDGLVLIPSCDKIVPGMIMGALRLNIPFIVITGGPMQPGELHGKKYDLISV FEGVGEYNVGKITKEELMEIETCACPGAGSCAGLFTANSMACLTETLGLSLPMCATTHATDAEKVRIAKRSGMKIVDLVK EDIKPTDLLTKESFENAILVDLALGGSSNTTLHIPALAYEIAPEFITLDDFDRLCDEVPHIASLRPGGDHFISDLHRAGG IPAVLKILEQKIRDANTVSGKSIKEIINEVKYIDYNIIRPVDKPVHETAGLRILKGNIAPDGCVVKISAVNPKMYKHEGP ARVFNSEEETIDAILGGDIKEGDVVVIRYEGPAGGPGMREMLSPTSAICGMGLDDSVALITDGRFSGGSRGPCIGHISPE AMAGGPIAIIEEGDIIAIDMMAKEINLKISEEEIKERLANWKKPEIKVKKGYISRYAKLVSSANEGAVLK >Mature_550_residues MISDNLKKGVSRAPNRSLLKACGYTDEEIEKPFIGIVNSFTEVVPGHIHLNTLAEAAKKGVYANGGTPFEFNTMAVCDGI AMGHEGMRYSLPSREIIADTVESMAKAHGFDGLVLIPSCDKIVPGMIMGALRLNIPFIVITGGPMQPGELHGKKYDLISV FEGVGEYNVGKITKEELMEIETCACPGAGSCAGLFTANSMACLTETLGLSLPMCATTHATDAEKVRIAKRSGMKIVDLVK EDIKPTDLLTKESFENAILVDLALGGSSNTTLHIPALAYEIAPEFITLDDFDRLCDEVPHIASLRPGGDHFISDLHRAGG IPAVLKILEQKIRDANTVSGKSIKEIINEVKYIDYNIIRPVDKPVHETAGLRILKGNIAPDGCVVKISAVNPKMYKHEGP ARVFNSEEETIDAILGGDIKEGDVVVIRYEGPAGGPGMREMLSPTSAICGMGLDDSVALITDGRFSGGSRGPCIGHISPE AMAGGPIAIIEEGDIIAIDMMAKEINLKISEEEIKERLANWKKPEIKVKKGYISRYAKLVSSANEGAVLK
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family
Homologues:
Organism=Escherichia coli, GI48994964, Length=602, Percent_Identity=41.1960132890365, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI2367371, Length=503, Percent_Identity=33.2007952286282, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1786464, Length=490, Percent_Identity=33.265306122449, Blast_Score=218, Evalue=8e-58, Organism=Escherichia coli, GI1788157, Length=551, Percent_Identity=29.4010889292196, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322476, Length=551, Percent_Identity=41.1978221415608, Blast_Score=400, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ILVD_META3 (A6UUU2)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324876.1 - ProteinModelPortal: A6UUU2 - SMR: A6UUU2 - STRING: A6UUU2 - GeneID: 5327023 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0680 - eggNOG: arNOG04340 - HOGENOM: HBG671001 - OMA: QSERWES - ProtClustDB: PRK00911 - BioCyc: MAEO419665:MAEO_0680-MONOMER - HAMAP: MF_00012 - InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 - PANTHER: PTHR21000 - TIGRFAMs: TIGR00110
Pfam domain/function: PF00920 ILVD_EDD; SSF52016 Aconitase/3IPM_dehydase_swvl
EC number: =4.2.1.9
Molecular weight: Translated: 58997; Mature: 58997
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00886 ILVD_EDD_1; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDNLKKGVSRAPNRSLLKACGYTDEEIEKPFIGIVNSFTEVVPGHIHLNTLAEAAKKG CCCCHHHHHHHCCCCHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCC VYANGGTPFEFNTMAVCDGIAMGHEGMRYSLPSREIIADTVESMAKAHGFDGLVLIPSCD EECCCCCCEEECHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCC KIVPGMIMGALRLNIPFIVITGGPMQPGELHGKKYDLISVFEGVGEYNVGKITKEELMEI HHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH ETCACPGAGSCAGLFTANSMACLTETLGLSLPMCATTHATDAEKVRIAKRSGMKIVDLVK HHHCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHH EDIKPTDLLTKESFENAILVDLALGGSSNTTLHIPALAYEIAPEFITLDDFDRLCDEVPH HCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHHHCCCEEEHHHHHHHHHHCCC IASLRPGGDHFISDLHRAGGIPAVLKILEQKIRDANTVSGKSIKEIINEVKYIDYNIIRP HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECC VDKPVHETAGLRILKGNIAPDGCVVKISAVNPKMYKHEGPARVFNSEEETIDAILGGDIK CCCHHHHHCCCEEEECCCCCCCEEEEEEECCCHHHCCCCCHHHCCCCHHHHHHHHCCCCC EGDVVVIRYEGPAGGPGMREMLSPTSAICGMGLDDSVALITDGRFSGGSRGPCIGHISPE CCCEEEEEECCCCCCCCHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHH AMAGGPIAIIEEGDIIAIDMMAKEINLKISEEEIKERLANWKKPEIKVKKGYISRYAKLV HHCCCCEEEEECCCEEEEEEEEEHHCCEECHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH SSANEGAVLK HCCCCCCCCC >Mature Secondary Structure MISDNLKKGVSRAPNRSLLKACGYTDEEIEKPFIGIVNSFTEVVPGHIHLNTLAEAAKKG CCCCHHHHHHHCCCCHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCC VYANGGTPFEFNTMAVCDGIAMGHEGMRYSLPSREIIADTVESMAKAHGFDGLVLIPSCD EECCCCCCEEECHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCC KIVPGMIMGALRLNIPFIVITGGPMQPGELHGKKYDLISVFEGVGEYNVGKITKEELMEI HHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH ETCACPGAGSCAGLFTANSMACLTETLGLSLPMCATTHATDAEKVRIAKRSGMKIVDLVK HHHCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHH EDIKPTDLLTKESFENAILVDLALGGSSNTTLHIPALAYEIAPEFITLDDFDRLCDEVPH HCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHHHCCCEEEHHHHHHHHHHCCC IASLRPGGDHFISDLHRAGGIPAVLKILEQKIRDANTVSGKSIKEIINEVKYIDYNIIRP HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECC VDKPVHETAGLRILKGNIAPDGCVVKISAVNPKMYKHEGPARVFNSEEETIDAILGGDIK CCCHHHHHCCCEEEECCCCCCCEEEEEEECCCHHHCCCCCHHHCCCCHHHHHHHHCCCCC EGDVVVIRYEGPAGGPGMREMLSPTSAICGMGLDDSVALITDGRFSGGSRGPCIGHISPE CCCEEEEEECCCCCCCCHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHH AMAGGPIAIIEEGDIIAIDMMAKEINLKISEEEIKERLANWKKPEIKVKKGYISRYAKLV HHCCCCEEEEECCCEEEEEEEEEHHCCEECHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH SSANEGAVLK HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA