| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is trxA [H]
Identifier: 150401020
GI number: 150401020
Start: 606588
End: 606974
Strand: Reverse
Name: trxA [H]
Synonym: Maeo_0589
Alternate gene names: 150401020
Gene position: 606974-606588 (Counterclockwise)
Preceding gene: 150401021
Following gene: 150401019
Centisome position: 38.67
GC content: 32.3
Gene sequence:
>387_bases ATGAGCAAATATATAAAACTGTTAATATTGTGTTCCCTATCTTCAATGATATTATTTGCTGGATGTGTGGGGACAGCAGA TGGGACAAATAACAATGAAAACCATGAGATAAGTTTAAATATTACAGACAATACGGTTATGCTTGAATTTTATGCCGACT GGTGCGGATATTGTAAGGCCCTTGAACCTACAATAAAAGACCTTGAAAATGAAGGAATTGAAGTAATAAAAATAGACACA GATAAAAATCAAAATTTGGCAAATCAATATGGCGTAAGGGCATTGCCTACCATCGTATATATTAAAGATGGAAAAATTGT TGATAAAACCATTGGATACAAGCCAGAGGAAATAAAGGAAAAGGCAAAAAAGATATACAATAACTAA
Upstream 100 bases:
>100_bases ATCGCACCCCCATGGAATTAAAGTTCGTTTAACTGGTGGCGAAGTGGGTAGGGTTAAAAAAATATATGAAACTGAGAATA TTTAAATTTTAGATGATAAA
Downstream 100 bases:
>100_bases TTACTATTTTTTTATTTTATATTTTCGACCTCTGGGAGAAAATATTTAAAATCTCCTGATTTTATGTATATTTTCGACCT CTGGGAGAAAATATACAATA
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSKYIKLLILCSLSSMILFAGCVGTADGTNNNENHEISLNITDNTVMLEFYADWCGYCKALEPTIKDLENEGIEVIKIDT DKNQNLANQYGVRALPTIVYIKDGKIVDKTIGYKPEEIKEKAKKIYNN
Sequences:
>Translated_128_residues MSKYIKLLILCSLSSMILFAGCVGTADGTNNNENHEISLNITDNTVMLEFYADWCGYCKALEPTIKDLENEGIEVIKIDT DKNQNLANQYGVRALPTIVYIKDGKIVDKTIGYKPEEIKEKAKKIYNN >Mature_127_residues SKYIKLLILCSLSSMILFAGCVGTADGTNNNENHEISLNITDNTVMLEFYADWCGYCKALEPTIKDLENEGIEVIKIDTD KNQNLANQYGVRALPTIVYIKDGKIVDKTIGYKPEEIKEKAKKIYNN
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=79, Percent_Identity=35.4430379746835, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1788936, Length=77, Percent_Identity=32.4675324675325, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI87082331, Length=74, Percent_Identity=31.0810810810811, Blast_Score=62, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71980562, Length=81, Percent_Identity=34.5679012345679, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71980565, Length=81, Percent_Identity=34.5679012345679, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17554386, Length=125, Percent_Identity=35.2, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=80, Percent_Identity=36.25, Blast_Score=61, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319925, Length=85, Percent_Identity=31.7647058823529, Blast_Score=60, Evalue=9e-11, Organism=Drosophila melanogaster, GI17530795, Length=84, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24639826, Length=92, Percent_Identity=32.6086956521739, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573567, Length=83, Percent_Identity=34.9397590361446, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 14399; Mature: 14268
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYIKLLILCSLSSMILFAGCVGTADGTNNNENHEISLNITDNTVMLEFYADWCGYCKA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHH LEPTIKDLENEGIEVIKIDTDKNQNLANQYGVRALPTIVYIKDGKIVDKTIGYKPEEIKE CCHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCEEEEEECCEEEEHHCCCCCHHHHH KAKKIYNN HHHHHCCC >Mature Secondary Structure SKYIKLLILCSLSSMILFAGCVGTADGTNNNENHEISLNITDNTVMLEFYADWCGYCKA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHH LEPTIKDLENEGIEVIKIDTDKNQNLANQYGVRALPTIVYIKDGKIVDKTIGYKPEEIKE CCHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCEEEEEECCEEEEHHCCCCCHHHHH KAKKIYNN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2559145; 8969504; 9384377; 8755892 [H]