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The map label for this gene is dsbD [H]

Identifier: 150401019

GI number: 150401019

Start: 605754

End: 606401

Strand: Reverse

Name: dsbD [H]

Synonym: Maeo_0588

Alternate gene names: 150401019

Gene position: 606401-605754 (Counterclockwise)

Preceding gene: 150401020

Following gene: 150401016

Centisome position: 38.64

GC content: 26.85

Gene sequence:

>648_bases
ATGGATTTATTTTTAATATTCATTGCGGGGATTTTTACGGCATTAGGTCCTTGCGTAATGACTGTATTACCTATTGTATT
TGCATACACATTTGGAATTTCCGAATCTAAAACCGAGGCATTTATAATATCTTTAAGTTTTGTTCTGGGATTTTCCATAG
TTTTTAGTTTATTGGGTGCAGTTTCGTCAATATTTGGAATTATGATAGGATTTTCAAAAATAAAGTATTTGGCAGGGATA
ATTGCAATATTATTTGGAATAACAATATTGTTAAAAAAAAGATTTTCATTTAGGTCAAAACAGAATATATTTGTAAAAAT
TATAAAAAAATTAAATGAAAAAACATCATTTAAATATAAAATATTAACTTCAATTATATTGGGTATATCATATGGATTTG
GCGCAAATGTATGTGCAGACCCAGTTTTAGCCGGTATATTGACATATACGGCCTCAAAAGAAGATATATTATTTGGATTT
TTTGCACTGTTAATTTATTCTTTGGGATATGGTCTTCCCATTATATTATTAAGCACATTAGGTATGGAGGGCAAAAAAAT
TATTGAAAAAATTTCTAATTTTGAAATAATCAATATAATTTCTGGGCTAATGCTTATAATATTGGGGGTTTATTTGTTAA
TTCATTAA

Upstream 100 bases:

>100_bases
GAAAATATACAATATCCTTTGGATATTGAACAAAAGCAGAGCTTTTATATTTAAAATCTCCGATTTTATAGATTAATTTT
TTTATTTTATGGGTGGAAAT

Downstream 100 bases:

>100_bases
CATTAAATTCTATGCATATATTTGAAAATATTTTCATGTTGTGCTATTACCTTAACTCCTATTTCTTCACCTGCTTCATT
TAATTCCTTTTCAATGTCCA

Product: cytochrome c biogenesis protein transmembrane region

Products: NA

Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDLFLIFIAGIFTALGPCVMTVLPIVFAYTFGISESKTEAFIISLSFVLGFSIVFSLLGAVSSIFGIMIGFSKIKYLAGI
IAILFGITILLKKRFSFRSKQNIFVKIIKKLNEKTSFKYKILTSIILGISYGFGANVCADPVLAGILTYTASKEDILFGF
FALLIYSLGYGLPIILLSTLGMEGKKIIEKISNFEIINIISGLMLIILGVYLLIH

Sequences:

>Translated_215_residues
MDLFLIFIAGIFTALGPCVMTVLPIVFAYTFGISESKTEAFIISLSFVLGFSIVFSLLGAVSSIFGIMIGFSKIKYLAGI
IAILFGITILLKKRFSFRSKQNIFVKIIKKLNEKTSFKYKILTSIILGISYGFGANVCADPVLAGILTYTASKEDILFGF
FALLIYSLGYGLPIILLSTLGMEGKKIIEKISNFEIINIISGLMLIILGVYLLIH
>Mature_215_residues
MDLFLIFIAGIFTALGPCVMTVLPIVFAYTFGISESKTEAFIISLSFVLGFSIVFSLLGAVSSIFGIMIGFSKIKYLAGI
IAILFGITILLKKRFSFRSKQNIFVKIIKKLNEKTSFKYKILTSIILGISYGFGANVCADPVLAGILTYTASKEDILFGF
FALLIYSLGYGLPIILLSTLGMEGKKIIEKISNFEIINIISGLMLIILGVYLLIH

Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834
- InterPro:   IPR022910
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]

EC number: =1.8.1.8 [H]

Molecular weight: Translated: 23572; Mature: 23572

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFLIFIAGIFTALGPCVMTVLPIVFAYTFGISESKTEAFIISLSFVLGFSIVFSLLGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSSIFGIMIGFSKIKYLAGIIAILFGITILLKKRFSFRSKQNIFVKIIKKLNEKTSFKYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ILTSIILGISYGFGANVCADPVLAGILTYTASKEDILFGFFALLIYSLGYGLPIILLSTL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHC
GMEGKKIIEKISNFEIINIISGLMLIILGVYLLIH
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLFLIFIAGIFTALGPCVMTVLPIVFAYTFGISESKTEAFIISLSFVLGFSIVFSLLGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSSIFGIMIGFSKIKYLAGIIAILFGITILLKKRFSFRSKQNIFVKIIKKLNEKTSFKYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ILTSIILGISYGFGANVCADPVLAGILTYTASKEDILFGFFALLIYSLGYGLPIILLSTL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHC
GMEGKKIIEKISNFEIINIISGLMLIILGVYLLIH
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA