| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401006
Identifier: 150401006
GI number: 150401006
Start: 593458
End: 594048
Strand: Reverse
Name: 150401006
Synonym: Maeo_0575
Alternate gene names: NA
Gene position: 594048-593458 (Counterclockwise)
Preceding gene: 150401008
Following gene: 150401005
Centisome position: 37.85
GC content: 28.76
Gene sequence:
>591_bases ATGTGCAATAAAAATAAATCAATGAATGAATACAACATAAATACGAATACGAAAAATCCAGAAAATAAGGGAAACGAATT GGATGACGGAAAAAATAAAAAAAAGATGGAATATGAGATAAAAGAAATTTTAGAAAAGGTCAAAAACGAGGAAAAAAATA AATCAATTGTAATCAAAAAAACCATTGAAAACATAGACAAATCATTAATAGATAATTTAGCAAGCCTTTTATCGAGTGAA GTAAAGGCTAAGATATATATTTATCTCAGAAAATATGGAAATAGCACAGTAGATGAAATAGCTCATGGAACAGGAATATA TCCTTCCACCATTAGGGAGGCAATTTTGGAAATGTATAAAAGTGGAATTGTAGTCAGAGAAAAGTTGGATAAAGAAGGGT TGGGTAAAAAACCATATATTTATTCAGCGGTGTCTCCATCTGAGCTCGTAAAAAAATTATCAAAAGGACTCCAAAATAAA TTAAACGAAGTGATAATGCTCGATAAAAAAATTAAAAAGAAAGAAATTAAGATACCGTTCTTACCTGTTAAAATAGTTGT CAATGACGATATTGATGAGCGAAATGATTAA
Upstream 100 bases:
>100_bases GATAAGGACATTATGTATATGTATATGTATATATATATGTATATGTATATGTATATGTATATGTATATGTATATGTATAT TATCTATATGAGGTGGTGGT
Downstream 100 bases:
>100_bases ATATTACTAAAATATCACAATGACATGTACATAATTCATGTATCTTAAAAATTATTATAATCATTAGTATGTAATAATTA TTTAGTATTTTAATTCCATG
Product: transcriptional regulator, TrmB
Products: NA
Alternate protein names: Transcription Regulator; Sugar-Specific Transcriptional Regulator Trmb
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MCNKNKSMNEYNINTNTKNPENKGNELDDGKNKKKMEYEIKEILEKVKNEEKNKSIVIKKTIENIDKSLIDNLASLLSSE VKAKIYIYLRKYGNSTVDEIAHGTGIYPSTIREAILEMYKSGIVVREKLDKEGLGKKPYIYSAVSPSELVKKLSKGLQNK LNEVIMLDKKIKKKEIKIPFLPVKIVVNDDIDERND
Sequences:
>Translated_196_residues MCNKNKSMNEYNINTNTKNPENKGNELDDGKNKKKMEYEIKEILEKVKNEEKNKSIVIKKTIENIDKSLIDNLASLLSSE VKAKIYIYLRKYGNSTVDEIAHGTGIYPSTIREAILEMYKSGIVVREKLDKEGLGKKPYIYSAVSPSELVKKLSKGLQNK LNEVIMLDKKIKKKEIKIPFLPVKIVVNDDIDERND >Mature_196_residues MCNKNKSMNEYNINTNTKNPENKGNELDDGKNKKKMEYEIKEILEKVKNEEKNKSIVIKKTIENIDKSLIDNLASLLSSE VKAKIYIYLRKYGNSTVDEIAHGTGIYPSTIREAILEMYKSGIVVREKLDKEGLGKKPYIYSAVSPSELVKKLSKGLQNK LNEVIMLDKKIKKKEIKIPFLPVKIVVNDDIDERND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22465; Mature: 22465
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNKNKSMNEYNINTNTKNPENKGNELDDGKNKKKMEYEIKEILEKVKNEEKNKSIVIKK CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHH TIENIDKSLIDNLASLLSSEVKAKIYIYLRKYGNSTVDEIAHGTGIYPSTIREAILEMYK HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH SGIVVREKLDKEGLGKKPYIYSAVSPSELVKKLSKGLQNKLNEVIMLDKKIKKKEIKIPF CCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LPVKIVVNDDIDERND EEEEEEEECCCCCCCC >Mature Secondary Structure MCNKNKSMNEYNINTNTKNPENKGNELDDGKNKKKMEYEIKEILEKVKNEEKNKSIVIKK CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHH TIENIDKSLIDNLASLLSSEVKAKIYIYLRKYGNSTVDEIAHGTGIYPSTIREAILEMYK HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH SGIVVREKLDKEGLGKKPYIYSAVSPSELVKKLSKGLQNKLNEVIMLDKKIKKKEIKIPF CCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LPVKIVVNDDIDERND EEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA