| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400955
Identifier: 150400955
GI number: 150400955
Start: 543790
End: 544443
Strand: Reverse
Name: 150400955
Synonym: Maeo_0523
Alternate gene names: NA
Gene position: 544443-543790 (Counterclockwise)
Preceding gene: 150400956
Following gene: 150400954
Centisome position: 34.69
GC content: 31.04
Gene sequence:
>654_bases ATGAACCTAAAAGAACTAATCTTAAATCCAAACGATTTTTTCAAATATCTATTAAATAAAGAAGTATCTCTCAAAACACC TTTTCTCATAGTTCTTATATTCTCAGTGTTAATGTCGGCATATTCTTACTATACAACATCAATAATGTTTAAAATATTTC CATCAGATATGCAAGGTATGATGTCAATGATGATAATAATTACCGCAGTATCTTCGCTAGTAGGAGGATTTATATCATGG TTATTAATAGCCGCAGTTATGCATATAATTTCAATGGCATTCAAAGGAGTGGGCTCATTTAAAAGAACATTCGAATTTAC GGGCTATGGATTCATAGCAAACTTAATTGCTCTATGTATTACCATACCAATTGGTTATTATTTTCTTTCAAGTGCTCATA TTACAACATTAACAGTAGCACAGCTCCAAAATCCAGCAGTTGTAAAACAGGTGATGTCTTCAATACTTCCAAAAACAATG ATATATACAAATCTTTTAGTAGGTATTGCAGTTAGTTTGTGGAATTTGAGCTTATGGACTTATGGAATAAAATATGCAAG GAATTTGGAGTTAAAGAAAGCATTTATAGTTGCATTAATTCCAACAGTATTATTTGGGGCATACCAGCTATACAGTGTGG CTAAATTCTTATAA
Upstream 100 bases:
>100_bases TCCAGAAATAGCAAATTATTTATTAACATAATTATATTAACATAATATTTAAATATAACTAAATACCAATTAATTATTAA AAAAATAAAGAGGGGAGAAA
Downstream 100 bases:
>100_bases GGTGAAATAATGAAAAAATCTTTTTTTATTTTTTTATCCATTTTATCTTTATTTTTAATTTTAAATACATTAAATGCGGT GGAATTTACAAGCATTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGMMSMMIIITAVSSLVGGFISW LLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCITIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTM IYTNLLVGIAVSLWNLSLWTYGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL
Sequences:
>Translated_217_residues MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGMMSMMIIITAVSSLVGGFISW LLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCITIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTM IYTNLLVGIAVSLWNLSLWTYGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL >Mature_217_residues MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGMMSMMIIITAVSSLVGGFISW LLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCITIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTM IYTNLLVGIAVSLWNLSLWTYGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL
Specific function: Unknown
COG id: COG2881
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006977 [H]
Pfam domain/function: PF04893 Yip1 [H]
EC number: NA
Molecular weight: Translated: 24333; Mature: 24333
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGM CCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MSMMIIITAVSSLVGGFISWLLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH TIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTMIYTNLLVGIAVSLWNLSLWT HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGM CCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MSMMIIITAVSSLVGGFISWLLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH TIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTMIYTNLLVGIAVSLWNLSLWT HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]