Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 150400951

GI number: 150400951

Start: 539528

End: 540631

Strand: Reverse

Name: ybjZ [C]

Synonym: Maeo_0519

Alternate gene names: 150400951

Gene position: 540631-539528 (Counterclockwise)

Preceding gene: 150400952

Following gene: 150400947

Centisome position: 34.45

GC content: 28.62

Gene sequence:

>1104_bases
ATGTATTTTGAAATGGCTAAGAGGAATTTAAAACGGCATAAACTTAGAAGTTTTTTAGCATTGTTAGGAATACTTATTGG
AGTTATGGCTATATCCTCATTAGGCATATTGGGCGGCGGATTAAAGCAGGGGATATCCAAAAATTTTGAAGGTGTTGCTA
ATTTTGTTGTGGTATTTCCAAATTCTGGGGAAGGTTATTTACATTTTACAAAAAAGGATATAACTAAATTAAAAAAATTG
GACTGTGTTGTAATACCAATATGCACAAAAAATGATATTATTTATATAAAAGGCAAAAACAAAAAAACATATGCTTCTAT
TTACGGAATAAAAAAAGAAGATATTAAATATTTAAATTTGGGAGTAGATAATAAGCTTTCTGATACAACCGTTTATGCGG
ATAGTATGTTTTCAGATTTTAACGAAGTTAATAAAAATGATGCCGTTGCAATAAATAATATATCATATAGGATAAAGGGA
ATATACAATAGTTCATTTTTTATACTTTCTCAAAACTCCATCATTTTATCTCAAAAGACATACAATAGATTTTATGGGAG
CAATTATTCAATGGTTGTGCTTTATGTTAAAAATAAAGATAATATAAATAATATTAAAAACGAAACTGAACTAATTATGA
ACAAAAAAGAAAAGAAAGTAATAATATTGTCAATGGATACAATACTTAAATCTGTAAATGATGCCATGAACATGCTTTCT
ATGTTTTTAATGGGAATGGGAGGAATATCACTATTGGTTGCGGGAATAGGTATTGGAAATGTAATGCTTATGAGCACAAT
TGAAAGAACAAAAGAAATTGGAGTTATGAAAAGTATCGGAGCTCCGAAAAAAAGTATTATGATAATATTCCTTTATGAAT
CACTAATACTTGGCATTATAGGAAGTTTTATTGGGGCATTTTTAAGTTTGGGAATTGGTTACCTCATTGTGTGTTATTTA
TTAAAAGCATCTTTAACGGTGGATTGTTTAGTTTATGTGATATTGGGAGTTTTATTTGGAATAGCAACTTCGTTAATCTC
TGCACTTTATCCAGCATATAAGGCATCTAAATTAGACCCAATAAAGGCACTTAGGAATGAATAA

Upstream 100 bases:

>100_bases
TATTATCACCATGTGGATTCAGTGGAATACCTTGTATATTTGGTATTTTTTCTTTCATTAATTCGGACTTTTAAGATTAT
TGGTAAAAATGAGGAATAAC

Downstream 100 bases:

>100_bases
TAAAATATATAATAAATTTAAATAATATCTGTCTTTTTCAATATTTTTTCTGCTTTTTCCTTTGAAATACCGTTCCTTAA
TATTGTCCATCTATTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MYFEMAKRNLKRHKLRSFLALLGILIGVMAISSLGILGGGLKQGISKNFEGVANFVVVFPNSGEGYLHFTKKDITKLKKL
DCVVIPICTKNDIIYIKGKNKKTYASIYGIKKEDIKYLNLGVDNKLSDTTVYADSMFSDFNEVNKNDAVAINNISYRIKG
IYNSSFFILSQNSIILSQKTYNRFYGSNYSMVVLYVKNKDNINNIKNETELIMNKKEKKVIILSMDTILKSVNDAMNMLS
MFLMGMGGISLLVAGIGIGNVMLMSTIERTKEIGVMKSIGAPKKSIMIIFLYESLILGIIGSFIGAFLSLGIGYLIVCYL
LKASLTVDCLVYVILGVLFGIATSLISALYPAYKASKLDPIKALRNE

Sequences:

>Translated_367_residues
MYFEMAKRNLKRHKLRSFLALLGILIGVMAISSLGILGGGLKQGISKNFEGVANFVVVFPNSGEGYLHFTKKDITKLKKL
DCVVIPICTKNDIIYIKGKNKKTYASIYGIKKEDIKYLNLGVDNKLSDTTVYADSMFSDFNEVNKNDAVAINNISYRIKG
IYNSSFFILSQNSIILSQKTYNRFYGSNYSMVVLYVKNKDNINNIKNETELIMNKKEKKVIILSMDTILKSVNDAMNMLS
MFLMGMGGISLLVAGIGIGNVMLMSTIERTKEIGVMKSIGAPKKSIMIIFLYESLILGIIGSFIGAFLSLGIGYLIVCYL
LKASLTVDCLVYVILGVLFGIATSLISALYPAYKASKLDPIKALRNE
>Mature_367_residues
MYFEMAKRNLKRHKLRSFLALLGILIGVMAISSLGILGGGLKQGISKNFEGVANFVVVFPNSGEGYLHFTKKDITKLKKL
DCVVIPICTKNDIIYIKGKNKKTYASIYGIKKEDIKYLNLGVDNKLSDTTVYADSMFSDFNEVNKNDAVAINNISYRIKG
IYNSSFFILSQNSIILSQKTYNRFYGSNYSMVVLYVKNKDNINNIKNETELIMNKKEKKVIILSMDTILKSVNDAMNMLS
MFLMGMGGISLLVAGIGIGNVMLMSTIERTKEIGVMKSIGAPKKSIMIIFLYESLILGIIGSFIGAFLSLGIGYLIVCYL
LKASLTVDCLVYVILGVLFGIATSLISALYPAYKASKLDPIKALRNE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=392, Percent_Identity=25, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 40677; Mature: 40677

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFEMAKRNLKRHKLRSFLALLGILIGVMAISSLGILGGGLKQGISKNFEGVANFVVVFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEE
NSGEGYLHFTKKDITKLKKLDCVVIPICTKNDIIYIKGKNKKTYASIYGIKKEDIKYLNL
CCCCCEEEECHHHHHHHHHCCEEEEEEECCCCEEEEECCCCEEEHEEECCCHHCCEEEEC
GVDNKLSDTTVYADSMFSDFNEVNKNDAVAINNISYRIKGIYNSSFFILSQNSIILSQKT
CCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEECCEEEEEEEECCEEEEEECCCEEEEEHH
YNRFYGSNYSMVVLYVKNKDNINNIKNETELIMNKKEKKVIILSMDTILKSVNDAMNMLS
HHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHH
MFLMGMGGISLLVAGIGIGNVMLMSTIERTKEIGVMKSIGAPKKSIMIIFLYESLILGII
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHH
GSFIGAFLSLGIGYLIVCYLLKASLTVDCLVYVILGVLFGIATSLISALYPAYKASKLDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
IKALRNE
HHHHHCC
>Mature Secondary Structure
MYFEMAKRNLKRHKLRSFLALLGILIGVMAISSLGILGGGLKQGISKNFEGVANFVVVFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEE
NSGEGYLHFTKKDITKLKKLDCVVIPICTKNDIIYIKGKNKKTYASIYGIKKEDIKYLNL
CCCCCEEEECHHHHHHHHHCCEEEEEEECCCCEEEEECCCCEEEHEEECCCHHCCEEEEC
GVDNKLSDTTVYADSMFSDFNEVNKNDAVAINNISYRIKGIYNSSFFILSQNSIILSQKT
CCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEECCEEEEEEEECCEEEEEECCCEEEEEHH
YNRFYGSNYSMVVLYVKNKDNINNIKNETELIMNKKEKKVIILSMDTILKSVNDAMNMLS
HHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHH
MFLMGMGGISLLVAGIGIGNVMLMSTIERTKEIGVMKSIGAPKKSIMIIFLYESLILGII
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHH
GSFIGAFLSLGIGYLIVCYLLKASLTVDCLVYVILGVLFGIATSLISALYPAYKASKLDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
IKALRNE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]