| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is purC [H]
Identifier: 150400900
GI number: 150400900
Start: 491275
End: 492003
Strand: Direct
Name: purC [H]
Synonym: Maeo_0468
Alternate gene names: 150400900
Gene position: 491275-492003 (Clockwise)
Preceding gene: 150400899
Following gene: 150400901
Centisome position: 31.3
GC content: 32.37
Gene sequence:
>729_bases ATGGAAATAAATATTAACGAAATCTTAAAAAATGAACCATTATACAGTGGAAAGGCAAAATCAATATATGAAATAGACGA TGAAAAAGTATTAATTGAATTTAGGGACGATATTACCGCAGGAGATGGAGAAAAGCACGATATAAAAAAAGGAAAAGGTC ATTTAAATGCTTTAATATCTTCAAAATTATTCGAACTTTTGGAAGAAAATGGGGTCCCCACACAGTTTATGGAATATGTT GAACCAATATATATGGTTGCTAAAAATGTGGAAATTATATTAATTGAAGTAATTGTAAGAAATATTACAGCAGGTAGTTT ATGTAGAAGATACCCATTTGAAGAAGGTAAAGAATTGACCACTCCTATTGTGCAATTTGACTATAAAGACGACGACTATG GGGACCCCATGTTAAACGAGGATATAGCCATTGCACTAAATCTTGCAACTGAGGAGGAGTTAAAAGAGTTAAAAGAGTTG GCACTAATAGTAAATGAAATTCTAAAAAAATTCTTTGACGAAAAGGGCATAATCCTTGTAGATTTCAAAATCGAGATTGG AAGAACAAAAGATGGAAAATTGGTAGTTGCAGACGAGATAAGCCCGGACACCATGAGATTATGGGATAAAGAAACAAAAG ATGTTCTTGATAAAGATGTATATAGAAAAGACATGGGCGATGTTGTTGGAAAATACGAAGTTGTAGCAAAAAGAATAGGA TGCATTTAA
Upstream 100 bases:
>100_bases TAATGCCATTGAAAATATGGGCAATATGGATATTGAAGTGTATAGCATATAGAATAATATAAACAAAAAAAGAAATAAAC AAAAAAGAAAGGTGTTAATA
Downstream 100 bases:
>100_bases ATTAATTAAATTAATTATATTATTATTTTTTTATATCTAAAAAGATGGCTTTATTTTTAAATTGAATGAAAATAGTGTAA TATAAAATAGTGTAAGATAT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MEININEILKNEPLYSGKAKSIYEIDDEKVLIEFRDDITAGDGEKHDIKKGKGHLNALISSKLFELLEENGVPTQFMEYV EPIYMVAKNVEIILIEVIVRNITAGSLCRRYPFEEGKELTTPIVQFDYKDDDYGDPMLNEDIAIALNLATEEELKELKEL ALIVNEILKKFFDEKGIILVDFKIEIGRTKDGKLVVADEISPDTMRLWDKETKDVLDKDVYRKDMGDVVGKYEVVAKRIG CI
Sequences:
>Translated_242_residues MEININEILKNEPLYSGKAKSIYEIDDEKVLIEFRDDITAGDGEKHDIKKGKGHLNALISSKLFELLEENGVPTQFMEYV EPIYMVAKNVEIILIEVIVRNITAGSLCRRYPFEEGKELTTPIVQFDYKDDDYGDPMLNEDIAIALNLATEEELKELKEL ALIVNEILKKFFDEKGIILVDFKIEIGRTKDGKLVVADEISPDTMRLWDKETKDVLDKDVYRKDMGDVVGKYEVVAKRIG CI >Mature_242_residues MEININEILKNEPLYSGKAKSIYEIDDEKVLIEFRDDITAGDGEKHDIKKGKGHLNALISSKLFELLEENGVPTQFMEYV EPIYMVAKNVEIILIEVIVRNITAGSLCRRYPFEEGKELTTPIVQFDYKDDDYGDPMLNEDIAIALNLATEEELKELKEL ALIVNEILKKFFDEKGIILVDFKIEIGRTKDGKLVVADEISPDTMRLWDKETKDVLDKDVYRKDMGDVVGKYEVVAKRIG CI
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Homo sapiens, GI119220557, Length=247, Percent_Identity=33.6032388663968, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI5453539, Length=247, Percent_Identity=33.6032388663968, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI119220559, Length=254, Percent_Identity=32.6771653543307, Blast_Score=105, Evalue=4e-23, Organism=Escherichia coli, GI1788820, Length=232, Percent_Identity=40.948275862069, Blast_Score=181, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17531275, Length=228, Percent_Identity=31.5789473684211, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI18860083, Length=217, Percent_Identity=32.258064516129, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24583917, Length=218, Percent_Identity=28.8990825688073, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 27681; Mature: 27681
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEININEILKNEPLYSGKAKSIYEIDDEKVLIEFRDDITAGDGEKHDIKKGKGHLNALIS CCCCHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHCHHHHHHHHH SKLFELLEENGVPTQFMEYVEPIYMVAKNVEIILIEVIVRNITAGSLCRRYPFEEGKELT HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC TPIVQFDYKDDDYGDPMLNEDIAIALNLATEEELKELKELALIVNEILKKFFDEKGIILV CCEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DFKIEIGRTKDGKLVVADEISPDTMRLWDKETKDVLDKDVYRKDMGDVVGKYEVVAKRIG EEEEEECCCCCCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CI CC >Mature Secondary Structure MEININEILKNEPLYSGKAKSIYEIDDEKVLIEFRDDITAGDGEKHDIKKGKGHLNALIS CCCCHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHCHHHHHHHHH SKLFELLEENGVPTQFMEYVEPIYMVAKNVEIILIEVIVRNITAGSLCRRYPFEEGKELT HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC TPIVQFDYKDDDYGDPMLNEDIAIALNLATEEELKELKELALIVNEILKKFFDEKGIILV CCEEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DFKIEIGRTKDGKLVVADEISPDTMRLWDKETKDVLDKDVYRKDMGDVVGKYEVVAKRIG EEEEEECCCCCCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]