| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400852
Identifier: 150400852
GI number: 150400852
Start: 439434
End: 440483
Strand: Direct
Name: 150400852
Synonym: Maeo_0420
Alternate gene names: NA
Gene position: 439434-440483 (Clockwise)
Preceding gene: 150400851
Following gene: 150400853
Centisome position: 28.0
GC content: 31.62
Gene sequence:
>1050_bases ATGAAAAAAATAAAAATAGAAAATAAATATATTGGTGAAAATGAGCCAGTGTTTATAATAGCAGAGGCAGGGGTTAATCA CAATGGAGATATTGAGCTCGCAAAAAAATTAATTGATATTGCATCAGAATGTGGTGCTGATGCCGTGAAATTTCAGACAT TTAAAGCTGAAAAGGTAGTTTCAAAAAGAGCTCCGAAAGCAGAGTATCAAACTAAAAATACAGGAACTGATGAGAGTCAG TATGAAATGATAAAGGAGCTCGAATTAACAGAAGATGATTTTTATGAATTATACAAATATTCTAAAAATAAAAATATAAT GTTTTTATCTACACCATTTGATTTTGAAAGTGCTGATTATTTAGACGAATTAATGCCATTATTTAAAATATCATCAACTG ATTTAAACAATTTACCATTTTTGGAATATATCGCAAAAAAGAAAAAGCCTATAATACTATCCACTGGAATGGGGACATTG GGGGAAATAGATGAAGCTATAAACATCATAAAGAAAGCAAACAATAATGATATAATATTGCTACACTGTGTCACAAACTA TCCAGCTAGTTTTGAAAGTTTGAATTTGAGAGTTATTAGAACATTAAAAGAAGCATTTAAACTACCTGTTGGTTTTTCAG ACCATAGCTTAGGAATTTATGCCCCAATAAGTGCGGTATCTCTCGGAGCTACTGTTATTGAGAAGCATTTTACATTAGAT AAAAATCTACCGGGTCCTGACCATAAGGCATCCCTAAGCCCCGAAGAATTAAAAGAAATGGTAAGTGCAATCCGTTCAAT TGAAAAAGCATTGGGAAATGGTATAAAAAGACCCACCTCCGAAGAAGAGAAAATTAAAAAAGTTGCAAGAAGAAGTTTAG TAGCAAATGTTGATATTCCAAAAGGGGCGACAATCAAAAAAGAAATGATAGTCATAAAAAGACCAGGAACGGGGATTGAG CCAAAGTATTTAAATGAAATTATGGGGAAAAAGGTAAAAAGAGATATCAAAATAGATGAGATTTTAAAATTAGGTGATAT AGAATGGTAA
Upstream 100 bases:
>100_bases AAATTTGATAAATTACCATTGTGTAAAAAATGTATTGATCCAATCGCACATTCATTATACATGCCAATAAAAATAAAAGA GAATATAATATGTGGTAAAT
Downstream 100 bases:
>100_bases AAATTTTAAGAACAGCAACTGGATGCATGGCATCGATTAGTTTTATCAATGAATTAATGAAAAAGGGTGTTGAGGTTGTA TGTGTTGATGCAAATCCTAT
Product: N-acetylneuraminate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKKIKIENKYIGENEPVFIIAEAGVNHNGDIELAKKLIDIASECGADAVKFQTFKAEKVVSKRAPKAEYQTKNTGTDESQ YEMIKELELTEDDFYELYKYSKNKNIMFLSTPFDFESADYLDELMPLFKISSTDLNNLPFLEYIAKKKKPIILSTGMGTL GEIDEAINIIKKANNNDIILLHCVTNYPASFESLNLRVIRTLKEAFKLPVGFSDHSLGIYAPISAVSLGATVIEKHFTLD KNLPGPDHKASLSPEELKEMVSAIRSIEKALGNGIKRPTSEEEKIKKVARRSLVANVDIPKGATIKKEMIVIKRPGTGIE PKYLNEIMGKKVKRDIKIDEILKLGDIEW
Sequences:
>Translated_349_residues MKKIKIENKYIGENEPVFIIAEAGVNHNGDIELAKKLIDIASECGADAVKFQTFKAEKVVSKRAPKAEYQTKNTGTDESQ YEMIKELELTEDDFYELYKYSKNKNIMFLSTPFDFESADYLDELMPLFKISSTDLNNLPFLEYIAKKKKPIILSTGMGTL GEIDEAINIIKKANNNDIILLHCVTNYPASFESLNLRVIRTLKEAFKLPVGFSDHSLGIYAPISAVSLGATVIEKHFTLD KNLPGPDHKASLSPEELKEMVSAIRSIEKALGNGIKRPTSEEEKIKKVARRSLVANVDIPKGATIKKEMIVIKRPGTGIE PKYLNEIMGKKVKRDIKIDEILKLGDIEW >Mature_349_residues MKKIKIENKYIGENEPVFIIAEAGVNHNGDIELAKKLIDIASECGADAVKFQTFKAEKVVSKRAPKAEYQTKNTGTDESQ YEMIKELELTEDDFYELYKYSKNKNIMFLSTPFDFESADYLDELMPLFKISSTDLNNLPFLEYIAKKKKPIILSTGMGTL GEIDEAINIIKKANNNDIILLHCVTNYPASFESLNLRVIRTLKEAFKLPVGFSDHSLGIYAPISAVSLGATVIEKHFTLD KNLPGPDHKASLSPEELKEMVSAIRSIEKALGNGIKRPTSEEEKIKKVARRSLVANVDIPKGATIKKEMIVIKRPGTGIE PKYLNEIMGKKVKRDIKIDEILKLGDIEW
Specific function: Unknown
COG id: COG2089
COG function: function code M; Sialic acid synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis spsE [H]
Homologues:
Organism=Homo sapiens, GI12056473, Length=339, Percent_Identity=37.1681415929204, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI21357081, Length=252, Percent_Identity=35.7142857142857, Blast_Score=170, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006190 - InterPro: IPR013785 - InterPro: IPR013132 - InterPro: IPR013974 [H]
Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]
EC number: NA
Molecular weight: Translated: 39213; Mature: 39213
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS50844 AFP_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKIENKYIGENEPVFIIAEAGVNHNGDIELAKKLIDIASECGADAVKFQTFKAEKVV CCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SKRAPKAEYQTKNTGTDESQYEMIKELELTEDDFYELYKYSKNKNIMFLSTPFDFESADY HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHH LDELMPLFKISSTDLNNLPFLEYIAKKKKPIILSTGMGTLGEIDEAINIIKKANNNDIIL HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEE LHCVTNYPASFESLNLRVIRTLKEAFKLPVGFSDHSLGIYAPISAVSLGATVIEKHFTLD EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCC KNLPGPDHKASLSPEELKEMVSAIRSIEKALGNGIKRPTSEEEKIKKVARRSLVANVDIP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCC KGATIKKEMIVIKRPGTGIEPKYLNEIMGKKVKRDIKIDEILKLGDIEW CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure MKKIKIENKYIGENEPVFIIAEAGVNHNGDIELAKKLIDIASECGADAVKFQTFKAEKVV CCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SKRAPKAEYQTKNTGTDESQYEMIKELELTEDDFYELYKYSKNKNIMFLSTPFDFESADY HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHH LDELMPLFKISSTDLNNLPFLEYIAKKKKPIILSTGMGTLGEIDEAINIIKKANNNDIIL HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEE LHCVTNYPASFESLNLRVIRTLKEAFKLPVGFSDHSLGIYAPISAVSLGATVIEKHFTLD EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCC KNLPGPDHKASLSPEELKEMVSAIRSIEKALGNGIKRPTSEEEKIKKVARRSLVANVDIP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCC KGATIKKEMIVIKRPGTGIEPKYLNEIMGKKVKRDIKIDEILKLGDIEW CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]