Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400774

Identifier: 150400774

GI number: 150400774

Start: 361940

End: 362641

Strand: Reverse

Name: 150400774

Synonym: Maeo_0341

Alternate gene names: NA

Gene position: 362641-361940 (Counterclockwise)

Preceding gene: 150400775

Following gene: 150400773

Centisome position: 23.11

GC content: 30.77

Gene sequence:

>702_bases
ATGCTCGGTGTTTGTATGCGTTCAAAGTTAGGAGAGGCCCCTTGGCATTCTTTGGTTGAAACTTCGACCCAAAACTCGGA
TATAAATTTTAAATGCATTGATTGGGGACTTCATTACTGTCCAAAAATAATAAAAAACGAATATATAATAGGATTCCATG
CACCAATAATCGATTTGGGGAATCCAGCAGATAAAAATAAAACTTGTTTAGGGGCATTAAAAAATGTAATTGATGAAATA
AAAGGGCATGATTACCTAACAATTCATTTGCACAATGGAAGAGAGCCAGATCAGGATACTTTAATAAATAATTTATCGGA
AATAAGCAATTATGCAAAAAGGAACAATATAAAATTATGCATTGAAAATTTAAGGACTGGATTTTCATCAAATCCCAACA
ACCTGGTTGAAATGGCAGATATTTGCAACTGCAATATAACTTTTGACATCGGCCATACAAATTATGAAGATAGGATAGAA
TTTATTGATCTATTTTCTGATAGAATATATAATGTTCACATGTATGAGCTCGAAAAAGATAAAATTGGGCATATTGCACC
AGATAATTTGGATAATTTAAAACCTGTTTTAGACAAACTATTAGACAATAAATGCGATTTCTGGCTCATTGAACTTATGA
AACTGGATGAAATTATATCTACAAAAAATCTTTTGAAAAATTATTTAAATGACCACAAATAG

Upstream 100 bases:

>100_bases
TATAATCCAAAGATTTAAATTTACAACATTAATTTTTTTAATGATAATGTTTATATAATCTAATACACAACATTAAGATT
AATATTTAAACGGTGATTTT

Downstream 100 bases:

>100_bases
AGAGGATTAAGAATAATAGAAAGATAGGGTGAAATCTTGAACACAGTTGGTTATAAAGATAATTTTATTGATTTCAAAAA
GTCATTTAATGAGTTGGAGC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLGVCMRSKLGEAPWHSLVETSTQNSDINFKCIDWGLHYCPKIIKNEYIIGFHAPIIDLGNPADKNKTCLGALKNVIDEI
KGHDYLTIHLHNGREPDQDTLINNLSEISNYAKRNNIKLCIENLRTGFSSNPNNLVEMADICNCNITFDIGHTNYEDRIE
FIDLFSDRIYNVHMYELEKDKIGHIAPDNLDNLKPVLDKLLDNKCDFWLIELMKLDEIISTKNLLKNYLNDHK

Sequences:

>Translated_233_residues
MLGVCMRSKLGEAPWHSLVETSTQNSDINFKCIDWGLHYCPKIIKNEYIIGFHAPIIDLGNPADKNKTCLGALKNVIDEI
KGHDYLTIHLHNGREPDQDTLINNLSEISNYAKRNNIKLCIENLRTGFSSNPNNLVEMADICNCNITFDIGHTNYEDRIE
FIDLFSDRIYNVHMYELEKDKIGHIAPDNLDNLKPVLDKLLDNKCDFWLIELMKLDEIISTKNLLKNYLNDHK
>Mature_233_residues
MLGVCMRSKLGEAPWHSLVETSTQNSDINFKCIDWGLHYCPKIIKNEYIIGFHAPIIDLGNPADKNKTCLGALKNVIDEI
KGHDYLTIHLHNGREPDQDTLINNLSEISNYAKRNNIKLCIENLRTGFSSNPNNLVEMADICNCNITFDIGHTNYEDRIE
FIDLFSDRIYNVHMYELEKDKIGHIAPDNLDNLKPVLDKLLDNKCDFWLIELMKLDEIISTKNLLKNYLNDHK

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 26860; Mature: 26860

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVCMRSKLGEAPWHSLVETSTQNSDINFKCIDWGLHYCPKIIKNEYIIGFHAPIIDLG
CCCCHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCEEECC
NPADKNKTCLGALKNVIDEIKGHDYLTIHLHNGREPDQDTLINNLSEISNYAKRNNIKLC
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
IENLRTGFSSNPNNLVEMADICNCNITFDIGHTNYEDRIEFIDLFSDRIYNVHMYELEKD
HHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCC
KIGHIAPDNLDNLKPVLDKLLDNKCDFWLIELMKLDEIISTKNLLKNYLNDHK
CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGVCMRSKLGEAPWHSLVETSTQNSDINFKCIDWGLHYCPKIIKNEYIIGFHAPIIDLG
CCCCHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCEEECC
NPADKNKTCLGALKNVIDEIKGHDYLTIHLHNGREPDQDTLINNLSEISNYAKRNNIKLC
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
IENLRTGFSSNPNNLVEMADICNCNITFDIGHTNYEDRIEFIDLFSDRIYNVHMYELEKD
HHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCC
KIGHIAPDNLDNLKPVLDKLLDNKCDFWLIELMKLDEIISTKNLLKNYLNDHK
CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]