Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400747

Identifier: 150400747

GI number: 150400747

Start: 339185

End: 339820

Strand: Reverse

Name: 150400747

Synonym: Maeo_0313

Alternate gene names: NA

Gene position: 339820-339185 (Counterclockwise)

Preceding gene: 150400748

Following gene: 150400746

Centisome position: 21.65

GC content: 28.3

Gene sequence:

>636_bases
ATGGTGGTATTTTTGAAAATACTTGATGCATCGTCTTTTATACATGGATATAATCCTTCAATAGAAGAGGGAATACATTA
TGCAACCCGCGGGATAATAGATGAAGTAATTACTAAAAGTGAGGTTGTGGAGCTCTCCATAGAATATGGAAAATTAAAAA
TAAGAGAACCGGAACCAGAGACTGTCGAAAAAGTTAGAAAAATGGCAATAGATATAACAGGAGATACTCTTTCTAAAAAT
GATATAGAAATACTTGCCCTTGCCATTGATTTAAATGGTGTGCTATATACCGACGATTATGGACTTCAAAATGTATCGGA
ACGATTCAACATAAAAACAGAGAACATAATATTTGAAGGAATTAATGGAAGAGTTGTCTGGAAATTAATTTGCAAAGGCT
GTAAAAAAATGTACGATTTAAATTACAATGATGATATTTGTGATGTATGTGGAAGCCCATTAAATAGAAAAATAGTAAAT
AGAATTAAATCAAATAAACAAAAAACAAATAAAAAACGAAATAATAAAAGGGGAAAAAACTATAAAAAAAACAAAACAGT
CAATAAAAACAACAATAGCAACAATAGCAACAATACCAATAATAATTTGAATAATAATGAAATTAAATTCATATAA

Upstream 100 bases:

>100_bases
TTATATTTTTATTTTTAAAATCTCAAACTTGCATAGTAAGTTTTACGACTGTAAAAAATTTTCCAAAGGAAAATTTTTGA
AGTTTTATAATTGGATATTT

Downstream 100 bases:

>100_bases
TTAACAAATTCAATAAAAACAATAAAAATACAATGAATTCATATAAGATATATAGATTATAACCTCGGGATATTATGGAT
ATTAATAATGATTTTATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPETVEKVRKMAIDITGDTLSKN
DIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEGINGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVN
RIKSNKQKTNKKRNNKRGKNYKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI

Sequences:

>Translated_211_residues
MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPETVEKVRKMAIDITGDTLSKN
DIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEGINGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVN
RIKSNKQKTNKKRNNKRGKNYKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI
>Mature_211_residues
MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPETVEKVRKMAIDITGDTLSKN
DIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEGINGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVN
RIKSNKQKTNKKRNNKRGKNYKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR022907 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 24133; Mature: 24133

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPE
CEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEEEECEEEEECCCHH
TVEKVRKMAIDITGDTLSKNDIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEG
HHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEEEC
INGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVNRIKSNKQKTNKKRNNKRGKN
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
YKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPE
CEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEEEECEEEEECCCHH
TVEKVRKMAIDITGDTLSKNDIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEG
HHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEEEC
INGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVNRIKSNKQKTNKKRNNKRGKN
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
YKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]