| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400747
Identifier: 150400747
GI number: 150400747
Start: 339185
End: 339820
Strand: Reverse
Name: 150400747
Synonym: Maeo_0313
Alternate gene names: NA
Gene position: 339820-339185 (Counterclockwise)
Preceding gene: 150400748
Following gene: 150400746
Centisome position: 21.65
GC content: 28.3
Gene sequence:
>636_bases ATGGTGGTATTTTTGAAAATACTTGATGCATCGTCTTTTATACATGGATATAATCCTTCAATAGAAGAGGGAATACATTA TGCAACCCGCGGGATAATAGATGAAGTAATTACTAAAAGTGAGGTTGTGGAGCTCTCCATAGAATATGGAAAATTAAAAA TAAGAGAACCGGAACCAGAGACTGTCGAAAAAGTTAGAAAAATGGCAATAGATATAACAGGAGATACTCTTTCTAAAAAT GATATAGAAATACTTGCCCTTGCCATTGATTTAAATGGTGTGCTATATACCGACGATTATGGACTTCAAAATGTATCGGA ACGATTCAACATAAAAACAGAGAACATAATATTTGAAGGAATTAATGGAAGAGTTGTCTGGAAATTAATTTGCAAAGGCT GTAAAAAAATGTACGATTTAAATTACAATGATGATATTTGTGATGTATGTGGAAGCCCATTAAATAGAAAAATAGTAAAT AGAATTAAATCAAATAAACAAAAAACAAATAAAAAACGAAATAATAAAAGGGGAAAAAACTATAAAAAAAACAAAACAGT CAATAAAAACAACAATAGCAACAATAGCAACAATACCAATAATAATTTGAATAATAATGAAATTAAATTCATATAA
Upstream 100 bases:
>100_bases TTATATTTTTATTTTTAAAATCTCAAACTTGCATAGTAAGTTTTACGACTGTAAAAAATTTTCCAAAGGAAAATTTTTGA AGTTTTATAATTGGATATTT
Downstream 100 bases:
>100_bases TTAACAAATTCAATAAAAACAATAAAAATACAATGAATTCATATAAGATATATAGATTATAACCTCGGGATATTATGGAT ATTAATAATGATTTTATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPETVEKVRKMAIDITGDTLSKN DIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEGINGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVN RIKSNKQKTNKKRNNKRGKNYKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI
Sequences:
>Translated_211_residues MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPETVEKVRKMAIDITGDTLSKN DIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEGINGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVN RIKSNKQKTNKKRNNKRGKNYKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI >Mature_211_residues MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPETVEKVRKMAIDITGDTLSKN DIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEGINGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVN RIKSNKQKTNKKRNNKRGKNYKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI
Specific function: Unknown
COG id: COG1439
COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0129 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002716 - InterPro: IPR006596 - InterPro: IPR022907 [H]
Pfam domain/function: PF01850 PIN [H]
EC number: NA
Molecular weight: Translated: 24133; Mature: 24133
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPE CEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEEEECEEEEECCCHH TVEKVRKMAIDITGDTLSKNDIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEG HHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEEEC INGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVNRIKSNKQKTNKKRNNKRGKN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC YKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MVVFLKILDASSFIHGYNPSIEEGIHYATRGIIDEVITKSEVVELSIEYGKLKIREPEPE CEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEEEECEEEEECCCHH TVEKVRKMAIDITGDTLSKNDIEILALAIDLNGVLYTDDYGLQNVSERFNIKTENIIFEG HHHHHHHHEEECCCCCCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEEEC INGRVVWKLICKGCKKMYDLNYNDDICDVCGSPLNRKIVNRIKSNKQKTNKKRNNKRGKN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC YKKNKTVNKNNNSNNSNNTNNNLNNNEIKFI CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]