| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is rps27Ae [H]
Identifier: 150400719
GI number: 150400719
Start: 307730
End: 307903
Strand: Direct
Name: rps27Ae [H]
Synonym: Maeo_0284
Alternate gene names: 150400719
Gene position: 307730-307903 (Clockwise)
Preceding gene: 150400718
Following gene: 150400720
Centisome position: 19.61
GC content: 33.91
Gene sequence:
>174_bases ATGGCTACAAAAAACAAAGGAACACAAAAACACAATTACTACAAAGTTGAAGGAGACAAAGTAGAAAAATTAAAAAAAGA ATGCCCAAGATGTAAAGGTGGCGTATTCATGGCTGAGCACCTAAACAGATTTGCATGCGGAAAATGTGGATACACAGAAT TCAAAAAACAATAA
Upstream 100 bases:
>100_bases TGATGATGAAAAATCAATGAATTTATTTGAAAAAAAATCAGTTTTAGAAAAAAATAAAATAGAAGAAGCTGAAACAACAG AAGAAGACGGTGAATAAAAT
Downstream 100 bases:
>100_bases ATTTTTAATTTTTTTTATAAATTTTTAATTTTTTTAATATATGATGATTTTTTTAGACATAATTATGGGCGTTGTATTAT AGTCAATCTTCGGACATTTT
Product: ribosomal protein S27a
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ
Sequences:
>Translated_57_residues MATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ >Mature_56_residues ATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ
Specific function: Unknown
COG id: COG1998
COG function: function code J; Ribosomal protein S27AE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S27Ae family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002906 - InterPro: IPR022845 [H]
Pfam domain/function: PF01599 Ribosomal_S27 [H]
EC number: NA
Molecular weight: Translated: 6588; Mature: 6457
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ CCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCC >Mature Secondary Structure ATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ CCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA