Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is rps27Ae [H]

Identifier: 150400719

GI number: 150400719

Start: 307730

End: 307903

Strand: Direct

Name: rps27Ae [H]

Synonym: Maeo_0284

Alternate gene names: 150400719

Gene position: 307730-307903 (Clockwise)

Preceding gene: 150400718

Following gene: 150400720

Centisome position: 19.61

GC content: 33.91

Gene sequence:

>174_bases
ATGGCTACAAAAAACAAAGGAACACAAAAACACAATTACTACAAAGTTGAAGGAGACAAAGTAGAAAAATTAAAAAAAGA
ATGCCCAAGATGTAAAGGTGGCGTATTCATGGCTGAGCACCTAAACAGATTTGCATGCGGAAAATGTGGATACACAGAAT
TCAAAAAACAATAA

Upstream 100 bases:

>100_bases
TGATGATGAAAAATCAATGAATTTATTTGAAAAAAAATCAGTTTTAGAAAAAAATAAAATAGAAGAAGCTGAAACAACAG
AAGAAGACGGTGAATAAAAT

Downstream 100 bases:

>100_bases
ATTTTTAATTTTTTTTATAAATTTTTAATTTTTTTAATATATGATGATTTTTTTAGACATAATTATGGGCGTTGTATTAT
AGTCAATCTTCGGACATTTT

Product: ribosomal protein S27a

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ

Sequences:

>Translated_57_residues
MATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ
>Mature_56_residues
ATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002906
- InterPro:   IPR022845 [H]

Pfam domain/function: PF01599 Ribosomal_S27 [H]

EC number: NA

Molecular weight: Translated: 6588; Mature: 6457

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ
CCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATKNKGTQKHNYYKVEGDKVEKLKKECPRCKGGVFMAEHLNRFACGKCGYTEFKKQ
CCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA