| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is rps24e
Identifier: 150400718
GI number: 150400718
Start: 307418
End: 307726
Strand: Direct
Name: rps24e
Synonym: Maeo_0283
Alternate gene names: 150400718
Gene position: 307418-307726 (Clockwise)
Preceding gene: 150400717
Following gene: 150400719
Centisome position: 19.59
GC content: 28.48
Gene sequence:
>309_bases ATGGAAATAAAAATAACATCTGATAGGGCAAACCCATTATTACATAGAAGAGAAGTTAAATTCATAGCAAATTATGATGG AACTACGCCATCAGTTAACGAAATAAAGATGAAAATAACAGCAATGTTAAACGCTGACAAATCCCTAACAATAGTGGATT CAATCTGTCAAGAATATGGAAACACAGAATCCTTAGGATATGTTAAAATATATGATGATGAAAAATCAATGAATTTATTT GAAAAAAAATCAGTTTTAGAAAAAAATAAAATAGAAGAAGCTGAAACAACAGAAGAAGACGGTGAATAA
Upstream 100 bases:
>100_bases TAAATAATTGTGTAGATAATAAAAGAATATATATTTCAAGATAGTAAAATTACAAGATTATAAATAACAGATATTACACA CAAACTATATTGGTGATTAA
Downstream 100 bases:
>100_bases AATATGGCTACAAAAAACAAAGGAACACAAAAACACAATTACTACAAAGTTGAAGGAGACAAAGTAGAAAAATTAAAAAA AGAATGCCCAAGATGTAAAG
Product: 30S ribosomal protein S24e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYGNTESLGYVKIYDDEKSMNLF EKKSVLEKNKIEEAETTEEDGE
Sequences:
>Translated_102_residues MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYGNTESLGYVKIYDDEKSMNLF EKKSVLEKNKIEEAETTEEDGE >Mature_102_residues MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYGNTESLGYVKIYDDEKSMNLF EKKSVLEKNKIEEAETTEEDGE
Specific function: Unknown
COG id: COG2004
COG function: function code J; Ribosomal protein S24E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S24e family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RS24_META3 (A6UTQ0)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324484.1 - ProteinModelPortal: A6UTQ0 - SMR: A6UTQ0 - STRING: A6UTQ0 - GeneID: 5326648 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0283 - eggNOG: arNOG12663 - HOGENOM: HBG553552 - OMA: NPMLHRT - ProtClustDB: PRK01178 - BioCyc: MAEO419665:MAEO_0283-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00545 - InterPro: IPR012677 - InterPro: IPR012678 - InterPro: IPR001976 - InterPro: IPR018098 - Gene3D: G3DSA:3.30.70.330 - ProDom: PD006052
Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core
EC number: NA
Molecular weight: Translated: 11651; Mature: 11651
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00529 RIBOSOMAL_S24E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYG CEEEECCCCCCCCEECCEEEEEECCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHCC NTESLGYVKIYDDEKSMNLFEKKSVLEKNKIEEAETTEEDGE CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYG CEEEECCCCCCCCEECCEEEEEECCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHCC NTESLGYVKIYDDEKSMNLFEKKSVLEKNKIEEAETTEEDGE CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA