Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is rps24e

Identifier: 150400718

GI number: 150400718

Start: 307418

End: 307726

Strand: Direct

Name: rps24e

Synonym: Maeo_0283

Alternate gene names: 150400718

Gene position: 307418-307726 (Clockwise)

Preceding gene: 150400717

Following gene: 150400719

Centisome position: 19.59

GC content: 28.48

Gene sequence:

>309_bases
ATGGAAATAAAAATAACATCTGATAGGGCAAACCCATTATTACATAGAAGAGAAGTTAAATTCATAGCAAATTATGATGG
AACTACGCCATCAGTTAACGAAATAAAGATGAAAATAACAGCAATGTTAAACGCTGACAAATCCCTAACAATAGTGGATT
CAATCTGTCAAGAATATGGAAACACAGAATCCTTAGGATATGTTAAAATATATGATGATGAAAAATCAATGAATTTATTT
GAAAAAAAATCAGTTTTAGAAAAAAATAAAATAGAAGAAGCTGAAACAACAGAAGAAGACGGTGAATAA

Upstream 100 bases:

>100_bases
TAAATAATTGTGTAGATAATAAAAGAATATATATTTCAAGATAGTAAAATTACAAGATTATAAATAACAGATATTACACA
CAAACTATATTGGTGATTAA

Downstream 100 bases:

>100_bases
AATATGGCTACAAAAAACAAAGGAACACAAAAACACAATTACTACAAAGTTGAAGGAGACAAAGTAGAAAAATTAAAAAA
AGAATGCCCAAGATGTAAAG

Product: 30S ribosomal protein S24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYGNTESLGYVKIYDDEKSMNLF
EKKSVLEKNKIEEAETTEEDGE

Sequences:

>Translated_102_residues
MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYGNTESLGYVKIYDDEKSMNLF
EKKSVLEKNKIEEAETTEEDGE
>Mature_102_residues
MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYGNTESLGYVKIYDDEKSMNLF
EKKSVLEKNKIEEAETTEEDGE

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS24_META3 (A6UTQ0)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324484.1
- ProteinModelPortal:   A6UTQ0
- SMR:   A6UTQ0
- STRING:   A6UTQ0
- GeneID:   5326648
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0283
- eggNOG:   arNOG12663
- HOGENOM:   HBG553552
- OMA:   NPMLHRT
- ProtClustDB:   PRK01178
- BioCyc:   MAEO419665:MAEO_0283-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00545
- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- Gene3D:   G3DSA:3.30.70.330
- ProDom:   PD006052

Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 11651; Mature: 11651

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00529 RIBOSOMAL_S24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYG
CEEEECCCCCCCCEECCEEEEEECCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHCC
NTESLGYVKIYDDEKSMNLFEKKSVLEKNKIEEAETTEEDGE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEIKITSDRANPLLHRREVKFIANYDGTTPSVNEIKMKITAMLNADKSLTIVDSICQEYG
CEEEECCCCCCCCEECCEEEEEECCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHCC
NTESLGYVKIYDDEKSMNLFEKKSVLEKNKIEEAETTEEDGE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA