| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400711
Identifier: 150400711
GI number: 150400711
Start: 301298
End: 301675
Strand: Reverse
Name: 150400711
Synonym: Maeo_0276
Alternate gene names: NA
Gene position: 301675-301298 (Counterclockwise)
Preceding gene: 150400713
Following gene: 150400710
Centisome position: 19.22
GC content: 25.66
Gene sequence:
>378_bases ATGATAACAATAAGAGGAAAATCTAAAAGGGAGCTCCTTGAAAAAATTGATAATACTGATTTCGGAGAGGAAGAAGAATT ATATATTAATAAAGAACTAACAAAAGATTTAGCAATTAATATTTTGGAGAGCTCAGATATAGAAAATATATATCTTCCAA AGTCTATGTATGGTAGAACCAGTAAAAAACTAATAAAAGCACTGGAAGAAATAGAAATTACAATTAAACCAAAAAATACA CAGACAGGAAGACCTACGGACAAAAAAGAAATAATATTAAATCTTAAAAAAGAAAATAAAACACCAAAAGAAATAGCAAA AATAACAGGAATAAATTTAAAAACTGTTGAATACCACTACTATAAAAAAGTGAGATAA
Upstream 100 bases:
>100_bases TATTGGTTATAATGTTAAAATCGTGTGTTTGAAAGTAAGTTTTAACTACCTGTTAGAATTATAAAATAAATATAAATATA AATATAAATATAAAGATATT
Downstream 100 bases:
>100_bases TGACAATAACAGAAGTAGAAACAACAATAACAGCAAAAAAAGTGCTTTGCTGCAAAGTTCCCACAAATAAAGGAGAACGA ATTAGAAAGATATTGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRTSKKLIKALEEIEITIKPKNT QTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHYYKKVR
Sequences:
>Translated_125_residues MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRTSKKLIKALEEIEITIKPKNT QTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHYYKKVR >Mature_125_residues MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRTSKKLIKALEEIEITIKPKNT QTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHYYKKVR
Specific function: Unknown
COG id: COG1710
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013249 - InterPro: IPR011991 [H]
Pfam domain/function: PF08281 Sigma70_r4_2 [H]
EC number: NA
Molecular weight: Translated: 14613; Mature: 14613
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRT CEEECCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHEEECCCCCCCEEECCHHHHCCH SKKLIKALEEIEITIKPKNTQTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHY HHHHHHHHHHCEEEECCCCCCCCCCCCCHHEEEEECCCCCCHHHHHHHCCCCEEEEEEEE YKKVR EEECC >Mature Secondary Structure MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRT CEEECCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHEEECCCCCCCEEECCHHHHCCH SKKLIKALEEIEITIKPKNTQTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHY HHHHHHHHHHCEEEECCCCCCCCCCCCCHHEEEEECCCCCCHHHHHHHCCCCEEEEEEEE YKKVR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]