| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is hflC [H]
Identifier: 150400689
GI number: 150400689
Start: 280097
End: 281029
Strand: Direct
Name: hflC [H]
Synonym: Maeo_0253
Alternate gene names: 150400689
Gene position: 280097-281029 (Clockwise)
Preceding gene: 150400685
Following gene: 150400691
Centisome position: 17.85
GC content: 31.19
Gene sequence:
>933_bases TTGTCATATATTTATAGTATATTCTATATATTTTATTTATCATATATCTTATTTATATCTTATTCACATATTGGCGTTTA TGTATCTTATTATCTAATTTTTTTTAATTTATATGGTGATATATTGGCAAATTATAGGATTATAATAATACTGGGTGTTG TATTAATGGGGGCTTCGCTTTTCTCCTCCTATTATATTATAGATAGCACCGAAGTAGGAATTGTAAAAACATTTGGGAAA GTAAATCCTGAACCAGTAGAATCAGGCATACATTTTAAAATTCCGATTGTACAGGATGTTGTAAGAATGAATATTTATGA AAAAAATATGGATATGGTTGAAAATAACGGAAATGCCGTTAAAGTTCTTACGCGAGAGGGGCTCCCCGTGGTTATTGATT TATCTGTGCAATATAAAATAAATCCAAAATATGCACCAGAATTATATTTAAGTGTTAAAAATCCAGAACCATGGATGACC AGTAGAATAAGGGCAAAGGTTAGAGATATAATTTCAGAATATAGCACTGATGAGCTTTACGGAGAGAAACGAACAGAGGT TCAGCAAAAAATAAACACAGAAATTGATAAAGAATTTAATGATAAAGGCATAATAGTTACAGCAGTTCTTATTAGAAATA TTGACCTTCCCCAACAGGTTGAACAGGCAATTGAGCGAAAAATGAAATCTAAGCAAGAAGCTGAACAGATGAAATATGAA GTTCAAAGAGCCAAAACAGAGGCCGAAAAGAAAATCGTAGAGGCACAAGGGCAGGCGAATGCTACAAGAATATTGGCAAA AGCAATAAGGGAAAATCCCGAAATATTAGAGTATAAGAAATTAGATGCTTTAAAAGAGATGGCCTCAAATGATAATAAGG TATTTATTGTGCCGAGCTCTAATGATTTGATATTAAATGTAGATAATAAATAA
Upstream 100 bases:
>100_bases TTGATTTTTGTAGATTTTCCGGTTCCACTCAAAAACATACCACATATTTTAAATTTTATATATTTCATTATATTGTCATA TATTTATAGTATATTTTATA
Downstream 100 bases:
>100_bases AGTCCTTTTTATTATATTTATATATACATTAATTTTCTATTTTTAAATTATTTTAAATATATATTATTTTAGTTAATTTA TTAGTTATAATACAGGAGCT
Product: band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSYIYSIFYIFYLSYILFISYSHIGVYVSYYLIFFNLYGDILANYRIIIILGVVLMGASLFSSYYIIDSTEVGIVKTFGK VNPEPVESGIHFKIPIVQDVVRMNIYEKNMDMVENNGNAVKVLTREGLPVVIDLSVQYKINPKYAPELYLSVKNPEPWMT SRIRAKVRDIISEYSTDELYGEKRTEVQQKINTEIDKEFNDKGIIVTAVLIRNIDLPQQVEQAIERKMKSKQEAEQMKYE VQRAKTEAEKKIVEAQGQANATRILAKAIRENPEILEYKKLDALKEMASNDNKVFIVPSSNDLILNVDNK
Sequences:
>Translated_310_residues MSYIYSIFYIFYLSYILFISYSHIGVYVSYYLIFFNLYGDILANYRIIIILGVVLMGASLFSSYYIIDSTEVGIVKTFGK VNPEPVESGIHFKIPIVQDVVRMNIYEKNMDMVENNGNAVKVLTREGLPVVIDLSVQYKINPKYAPELYLSVKNPEPWMT SRIRAKVRDIISEYSTDELYGEKRTEVQQKINTEIDKEFNDKGIIVTAVLIRNIDLPQQVEQAIERKMKSKQEAEQMKYE VQRAKTEAEKKIVEAQGQANATRILAKAIRENPEILEYKKLDALKEMASNDNKVFIVPSSNDLILNVDNK >Mature_309_residues SYIYSIFYIFYLSYILFISYSHIGVYVSYYLIFFNLYGDILANYRIIIILGVVLMGASLFSSYYIIDSTEVGIVKTFGKV NPEPVESGIHFKIPIVQDVVRMNIYEKNMDMVENNGNAVKVLTREGLPVVIDLSVQYKINPKYAPELYLSVKNPEPWMTS RIRAKVRDIISEYSTDELYGEKRTEVQQKINTEIDKEFNDKGIIVTAVLIRNIDLPQQVEQAIERKMKSKQEAEQMKYEV QRAKTEAEKKIVEAQGQANATRILAKAIRENPEILEYKKLDALKEMASNDNKVFIVPSSNDLILNVDNK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflC subfamily [H]
Homologues:
Organism=Homo sapiens, GI6005854, Length=288, Percent_Identity=22.9166666666667, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI221307584, Length=288, Percent_Identity=22.9166666666667, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI193205005, Length=252, Percent_Identity=23.015873015873, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321571, Length=262, Percent_Identity=23.2824427480916, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI161077244, Length=260, Percent_Identity=25.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161077238, Length=260, Percent_Identity=25.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161077236, Length=260, Percent_Identity=25.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161077234, Length=260, Percent_Identity=25.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161077240, Length=260, Percent_Identity=25.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161077242, Length=260, Percent_Identity=25.7692307692308, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24585145, Length=281, Percent_Identity=23.4875444839858, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585147, Length=281, Percent_Identity=23.4875444839858, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573263, Length=263, Percent_Identity=23.1939163498099, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010200 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 35719; Mature: 35588
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYIYSIFYIFYLSYILFISYSHIGVYVSYYLIFFNLYGDILANYRIIIILGVVLMGASL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FSSYYIIDSTEVGIVKTFGKVNPEPVESGIHFKIPIVQDVVRMNIYEKNMDMVENNGNAV HHCEEEEECCCCCHHHHHCCCCCCHHCCCCEEEEHHHHHHHHHHHHHCCCHHHCCCCCEE KVLTREGLPVVIDLSVQYKINPKYAPELYLSVKNPEPWMTSRIRAKVRDIISEYSTDELY EEEEECCCCEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHC GEKRTEVQQKINTEIDKEFNDKGIIVTAVLIRNIDLPQQVEQAIERKMKSKQEAEQMKYE CCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VQRAKTEAEKKIVEAQGQANATRILAKAIRENPEILEYKKLDALKEMASNDNKVFIVPSS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECC NDLILNVDNK CCEEEEECCC >Mature Secondary Structure SYIYSIFYIFYLSYILFISYSHIGVYVSYYLIFFNLYGDILANYRIIIILGVVLMGASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FSSYYIIDSTEVGIVKTFGKVNPEPVESGIHFKIPIVQDVVRMNIYEKNMDMVENNGNAV HHCEEEEECCCCCHHHHHCCCCCCHHCCCCEEEEHHHHHHHHHHHHHCCCHHHCCCCCEE KVLTREGLPVVIDLSVQYKINPKYAPELYLSVKNPEPWMTSRIRAKVRDIISEYSTDELY EEEEECCCCEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHC GEKRTEVQQKINTEIDKEFNDKGIIVTAVLIRNIDLPQQVEQAIERKMKSKQEAEQMKYE CCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VQRAKTEAEKKIVEAQGQANATRILAKAIRENPEILEYKKLDALKEMASNDNKVFIVPSS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECC NDLILNVDNK CCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]