| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400655
Identifier: 150400655
GI number: 150400655
Start: 235309
End: 237585
Strand: Direct
Name: 150400655
Synonym: Maeo_0217
Alternate gene names: NA
Gene position: 235309-237585 (Clockwise)
Preceding gene: 150400654
Following gene: 150400657
Centisome position: 14.99
GC content: 34.96
Gene sequence:
>2277_bases ATGATAAATAAATGTGAGATATGCAACGGGACGGGTAAAAAAATAGTTAAATACGAAGAATGCCCAGAATGTGAAGGGAC AGGATTTTTAGAAGAATTTGATACCAAATCTCAATTTAAAAGGGCATCTAAAAACTCAAAATACGATTTTGACGATGCCG AATTACCATGCCCTACATGCAACGGTTCGGGGCAAATCCCAATTTATGATTCCTGCGAATATTGCGGGGGTAGCGGGAAA GTTGTAACATGTGGTAAATGCAATAAAATAATTGGAAAATATCCACAAGATAAAGATAAATCATTATGCGAAAAATGTGA AAAAATGGAAAACAAAGCAAAAGCTCAAAAAATAGTATATGAATTAGATGGATTATGTAATATGTATGATTTAGAGGAGG GGGCATATTATAAAGGAAAAGTGGTTAGAAGCGAAAAATATGGACTATTTATACAATTGAACAATCAAACAAGGGGATTA TTAAGAGGTCGGGAAATGATTGGAAAAAGAATGTCCGACTTTAAAATAGGAGATAGCATAATTGTGCAAGTATCCGAATT AAAACCAAGTAAAAGAGAGGTTGATTTTAGGTATTTACCGATATCAGATTATACCATAGAAAAACTTGAAAGAAAAATTC CTCTAACTACAATTAAAGAAATAAACGAGAATGGAGTTTTGGAAATGAGGGACGAAACTGTCCATATTAAAGGGGAGCTC CTTTACATTACCCAAACACCGGGACCTACAATATTTACTATTACTGATGGAACAGATATCGCATGGATTGCAGCATTTGA AATAGCTGGACTAAGAACCCACCCCGAATTAGTTGAAGGGGATATCGTAGATGTTGTAGGGACTGTTTCAATTAGGGATG GAAAACTTCAAATTGAAAGAATTAAGATGGAGAAATTAGAAGGGGAAGAACTAGAAGAAGTAAAGGCAAGAATAGAAGCA GAATTGGACAAAAAAGCAGAACCATACAGCGACATAGAATTCCTTGTAAAAAGCCCAATTCTTGAAAAATTAAGACCAAA AATGGCAGAAGTAGCAAAACAAATAAGAAGGGCATTATTGGACGGAAAACCAATAATTTTAAGACATCATGCCGATACAG ACGGATATTGTGCAGGTTTGGCATTGGAAAAAGCAATAATACCAATATTAAATGAATTTTCAATTGATAGTGGAGCCCAA TGGCACTATTTCAGAAGAAGCCCTTCAAAAGCACCATTTTATGAGTTGGAAGATATTACAAAAGATTTATCCTTTGCAAT AGAGGACAAAATAAGATTTGGTCAAAAATTGCCCCTTGTAATATTGACAGATAATGGTAGTACCCACGAAGACATACCAG CATTAGCTCAGGCAGAAGCTTATGGTATTGATGTTGTTGTAATAGACCATCATTATCCAGGAGATGTAATAGGTGGTAAA GTAGAGGTAGATGAATATGCAAGTGCCCATGTAAATCCATATCTCGTAGGAGGGGATAGTAATTTAACAGCCGGAGCCCT AGCAACAGAAGTAGCAAGAATGATAAATAAAGACATCACCGACGATATAAAGCATCTCCCGGGTATAGCTATGGTTGGGG ACCATGCAAAAGGAGAGGAAGTAGAAGAATACATAAAAATAGCAACAGAAGATTTGACGGAACATAGTGCAAAATATGGA AACAATAAAGAATACACAAAAGAAGAATTAGATATAATTGGTTTGTGTATGGACTTTGAAGCTTTCTATTTAAGATTTAT GAATGGAAGGGGAATCGTTGAAGATATTTTGGCAATAAATAAAACAGAAATAAACAGACATGAAAAATTAATAGACATAT TACATACCAGAGCAATAAGTATGACCAATAGGCAAATGAAAGCTGTTTTACCTGCAATAAAAACCAGAACTCTAAAAAAT GGAATAATATTGAACATGCTTGATGTTGAGAAACATGCCCATAAATTTACATTCCCTGCACCCGGAAAAACTTGCGGTTT TGCCCATGATATCATAGTTAAACAACATCCAGAAGATACTCCAATAATCACTTTATCATATGGTCCTGATTTTGGAGTTG TTAGAGCAACTGATGCAGTTAGTGATAAATTCTCCTTCAATTTGAATTTGATTGTTCAGCAACTTATAGAAGGAATTCCA GAAGCTTCCCTTGATGGAGGGGGGCATGAATGTGCTGGAAGTCTGAAATTTGTTGAAGGATTGAGGGAGAAAGTATTAAA TAAATTTGTTGAAATCGTTGAAAATATGACGGAATAA
Upstream 100 bases:
>100_bases GTTCGGAGCTCCCTGTAAATGAAACATTGAAAATAGGGATATTTTCTTTCGAACAAACTCTATATTTAATCAATAAATTA ATATTATTTTTGGTGAATAC
Downstream 100 bases:
>100_bases TTAAAAATAAAAAAATAAAAATAAATAAAAACTCTTTGAGTTTTTATACGATAATATATTGCAAAGAGTTCTCGAACGAA CTATATATTTTGGATATGTA
Product: phosphoesterase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MINKCEICNGTGKKIVKYEECPECEGTGFLEEFDTKSQFKRASKNSKYDFDDAELPCPTCNGSGQIPIYDSCEYCGGSGK VVTCGKCNKIIGKYPQDKDKSLCEKCEKMENKAKAQKIVYELDGLCNMYDLEEGAYYKGKVVRSEKYGLFIQLNNQTRGL LRGREMIGKRMSDFKIGDSIIVQVSELKPSKREVDFRYLPISDYTIEKLERKIPLTTIKEINENGVLEMRDETVHIKGEL LYITQTPGPTIFTITDGTDIAWIAAFEIAGLRTHPELVEGDIVDVVGTVSIRDGKLQIERIKMEKLEGEELEEVKARIEA ELDKKAEPYSDIEFLVKSPILEKLRPKMAEVAKQIRRALLDGKPIILRHHADTDGYCAGLALEKAIIPILNEFSIDSGAQ WHYFRRSPSKAPFYELEDITKDLSFAIEDKIRFGQKLPLVILTDNGSTHEDIPALAQAEAYGIDVVVIDHHYPGDVIGGK VEVDEYASAHVNPYLVGGDSNLTAGALATEVARMINKDITDDIKHLPGIAMVGDHAKGEEVEEYIKIATEDLTEHSAKYG NNKEYTKEELDIIGLCMDFEAFYLRFMNGRGIVEDILAINKTEINRHEKLIDILHTRAISMTNRQMKAVLPAIKTRTLKN GIILNMLDVEKHAHKFTFPAPGKTCGFAHDIIVKQHPEDTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVQQLIEGIP EASLDGGGHECAGSLKFVEGLREKVLNKFVEIVENMTE
Sequences:
>Translated_758_residues MINKCEICNGTGKKIVKYEECPECEGTGFLEEFDTKSQFKRASKNSKYDFDDAELPCPTCNGSGQIPIYDSCEYCGGSGK VVTCGKCNKIIGKYPQDKDKSLCEKCEKMENKAKAQKIVYELDGLCNMYDLEEGAYYKGKVVRSEKYGLFIQLNNQTRGL LRGREMIGKRMSDFKIGDSIIVQVSELKPSKREVDFRYLPISDYTIEKLERKIPLTTIKEINENGVLEMRDETVHIKGEL LYITQTPGPTIFTITDGTDIAWIAAFEIAGLRTHPELVEGDIVDVVGTVSIRDGKLQIERIKMEKLEGEELEEVKARIEA ELDKKAEPYSDIEFLVKSPILEKLRPKMAEVAKQIRRALLDGKPIILRHHADTDGYCAGLALEKAIIPILNEFSIDSGAQ WHYFRRSPSKAPFYELEDITKDLSFAIEDKIRFGQKLPLVILTDNGSTHEDIPALAQAEAYGIDVVVIDHHYPGDVIGGK VEVDEYASAHVNPYLVGGDSNLTAGALATEVARMINKDITDDIKHLPGIAMVGDHAKGEEVEEYIKIATEDLTEHSAKYG NNKEYTKEELDIIGLCMDFEAFYLRFMNGRGIVEDILAINKTEINRHEKLIDILHTRAISMTNRQMKAVLPAIKTRTLKN GIILNMLDVEKHAHKFTFPAPGKTCGFAHDIIVKQHPEDTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVQQLIEGIP EASLDGGGHECAGSLKFVEGLREKVLNKFVEIVENMTE >Mature_758_residues MINKCEICNGTGKKIVKYEECPECEGTGFLEEFDTKSQFKRASKNSKYDFDDAELPCPTCNGSGQIPIYDSCEYCGGSGK VVTCGKCNKIIGKYPQDKDKSLCEKCEKMENKAKAQKIVYELDGLCNMYDLEEGAYYKGKVVRSEKYGLFIQLNNQTRGL LRGREMIGKRMSDFKIGDSIIVQVSELKPSKREVDFRYLPISDYTIEKLERKIPLTTIKEINENGVLEMRDETVHIKGEL LYITQTPGPTIFTITDGTDIAWIAAFEIAGLRTHPELVEGDIVDVVGTVSIRDGKLQIERIKMEKLEGEELEEVKARIEA ELDKKAEPYSDIEFLVKSPILEKLRPKMAEVAKQIRRALLDGKPIILRHHADTDGYCAGLALEKAIIPILNEFSIDSGAQ WHYFRRSPSKAPFYELEDITKDLSFAIEDKIRFGQKLPLVILTDNGSTHEDIPALAQAEAYGIDVVVIDHHYPGDVIGGK VEVDEYASAHVNPYLVGGDSNLTAGALATEVARMINKDITDDIKHLPGIAMVGDHAKGEEVEEYIKIATEDLTEHSAKYG NNKEYTKEELDIIGLCMDFEAFYLRFMNGRGIVEDILAINKTEINRHEKLIDILHTRAISMTNRQMKAVLPAIKTRTLKN GIILNMLDVEKHAHKFTFPAPGKTCGFAHDIIVKQHPEDTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVQQLIEGIP EASLDGGGHECAGSLKFVEGLREKVLNKFVEIVENMTE
Specific function: Unknown
COG id: COG1107
COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001305 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004365 - InterPro: IPR001667 - InterPro: IPR003029 - InterPro: IPR022967 [H]
Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]
EC number: NA
Molecular weight: Translated: 84878; Mature: 84878
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKCEICNGTGKKIVKYEECPECEGTGFLEEFDTKSQFKRASKNSKYDFDDAELPCPTC CCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCC NGSGQIPIYDSCEYCGGSGKVVTCGKCNKIIGKYPQDKDKSLCEKCEKMENKAKAQKIVY CCCCCEEECCCHHCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELDGLCNMYDLEEGAYYKGKVVRSEKYGLFIQLNNQTRGLLRGREMIGKRMSDFKIGDSI HHHCCCCEEECCCCCEEECEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEE IVQVSELKPSKREVDFRYLPISDYTIEKLERKIPLTTIKEINENGVLEMRDETVHIKGEL EEEEHHCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCEEEECCEEEEEEEE LYITQTPGPTIFTITDGTDIAWIAAFEIAGLRTHPELVEGDIVDVVGTVSIRDGKLQIER EEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHCCCEEEEEEEEEEECCCEEEEE IKMEKLEGEELEEVKARIEAELDKKAEPYSDIEFLVKSPILEKLRPKMAEVAKQIRRALL EHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DGKPIILRHHADTDGYCAGLALEKAIIPILNEFSIDSGAQWHYFRRSPSKAPFYELEDIT CCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH KDLSFAIEDKIRFGQKLPLVILTDNGSTHEDIPALAQAEAYGIDVVVIDHHYPGDVIGGK HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCE VEVDEYASAHVNPYLVGGDSNLTAGALATEVARMINKDITDDIKHLPGIAMVGDHAKGEE EEHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCHH VEEYIKIATEDLTEHSAKYGNNKEYTKEELDIIGLCMDFEAFYLRFMNGRGIVEDILAIN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEEEHHHHHHHHHHHCCCCHHHHHHHCC KTEINRHEKLIDILHTRAISMTNRQMKAVLPAIKTRTLKNGIILNMLDVEKHAHKFTFPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCEEECCC PGKTCGFAHDIIVKQHPEDTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVQQLIEGIP CCCCCCCCEEEHEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC EASLDGGGHECAGSLKFVEGLREKVLNKFVEIVENMTE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINKCEICNGTGKKIVKYEECPECEGTGFLEEFDTKSQFKRASKNSKYDFDDAELPCPTC CCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCC NGSGQIPIYDSCEYCGGSGKVVTCGKCNKIIGKYPQDKDKSLCEKCEKMENKAKAQKIVY CCCCCEEECCCHHCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELDGLCNMYDLEEGAYYKGKVVRSEKYGLFIQLNNQTRGLLRGREMIGKRMSDFKIGDSI HHHCCCCEEECCCCCEEECEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEE IVQVSELKPSKREVDFRYLPISDYTIEKLERKIPLTTIKEINENGVLEMRDETVHIKGEL EEEEHHCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCEEEECCEEEEEEEE LYITQTPGPTIFTITDGTDIAWIAAFEIAGLRTHPELVEGDIVDVVGTVSIRDGKLQIER EEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHCCCEEEEEEEEEEECCCEEEEE IKMEKLEGEELEEVKARIEAELDKKAEPYSDIEFLVKSPILEKLRPKMAEVAKQIRRALL EHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DGKPIILRHHADTDGYCAGLALEKAIIPILNEFSIDSGAQWHYFRRSPSKAPFYELEDIT CCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH KDLSFAIEDKIRFGQKLPLVILTDNGSTHEDIPALAQAEAYGIDVVVIDHHYPGDVIGGK HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCE VEVDEYASAHVNPYLVGGDSNLTAGALATEVARMINKDITDDIKHLPGIAMVGDHAKGEE EEHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCHH VEEYIKIATEDLTEHSAKYGNNKEYTKEELDIIGLCMDFEAFYLRFMNGRGIVEDILAIN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEEEHHHHHHHHHHHCCCCHHHHHHHCC KTEINRHEKLIDILHTRAISMTNRQMKAVLPAIKTRTLKNGIILNMLDVEKHAHKFTFPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCEEECCC PGKTCGFAHDIIVKQHPEDTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVQQLIEGIP CCCCCCCCEEEHEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC EASLDGGGHECAGSLKFVEGLREKVLNKFVEIVENMTE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]