Click here to switch to the map view.

The map label for this gene is rps6e [H]

Identifier: 150400638

GI number: 150400638

Start: 214603

End: 214971

Strand: Reverse

Name: rps6e [H]

Synonym: Maeo_0200

Alternate gene names: 150400638

Gene position: 214971-214603 (Counterclockwise)

Preceding gene: 150400639

Following gene: 150400637

Centisome position: 13.7

GC content: 33.6

Gene sequence:

>369_bases
ATGGCAAAATTTAAATTTGTAGTATCTGATAAAGATGGAAAATCATACCAGTTTGAAGCAGAAACAACAGCAGTAATTGG
TAAAACAATAGGCGATGAAATAAACGGGTCAATTGTAGGTTTAGATGGATATAAATTAAAAATAACAGGCGGTTCAGATA
AATGTGGATTTGCTATGAGACATGACATACATGGAAACATGAAAATGAGAGTATTATTGAGCAAAGCGCCAGGATACAAA
CCACAAGATGCAGGAATTAGAAAAAGAAAAACCGCAAGAGGAAATTTAATATCCTCAGACATTGTTCAAATAAATACAAA
AGTTGTAGAGGCAGGAGCTACACCCATTAGTGAAATAGTAGGACAATAA

Upstream 100 bases:

>100_bases
CAATTGGAACACATACAAATGCAGATAAAACACAAACATAGTCAAGGTCAATTAAATAATAAATAAGAAAATAAAAAAAA
TAAGAAATAAAGGTGAAAAT

Downstream 100 bases:

>100_bases
AAAATAGCATATACTAAAAATAATAAATATGTGGATTAGCCATAAATACCCTCCAACAGGCCAAATATAAATTAAAAATT
TTTTTATATTTTTATTTATT

Product: 30S ribosomal protein S6e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MAKFKFVVSDKDGKSYQFEAETTAVIGKTIGDEINGSIVGLDGYKLKITGGSDKCGFAMRHDIHGNMKMRVLLSKAPGYK
PQDAGIRKRKTARGNLISSDIVQINTKVVEAGATPISEIVGQ

Sequences:

>Translated_122_residues
MAKFKFVVSDKDGKSYQFEAETTAVIGKTIGDEINGSIVGLDGYKLKITGGSDKCGFAMRHDIHGNMKMRVLLSKAPGYK
PQDAGIRKRKTARGNLISSDIVQINTKVVEAGATPISEIVGQ
>Mature_121_residues
AKFKFVVSDKDGKSYQFEAETTAVIGKTIGDEINGSIVGLDGYKLKITGGSDKCGFAMRHDIHGNMKMRVLLSKAPGYKP
QDAGIRKRKTARGNLISSDIVQINTKVVEAGATPISEIVGQ

Specific function: Unknown

COG id: COG2125

COG function: function code J; Ribosomal protein S6E (S10)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6e family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325167, Length=102, Percent_Identity=33.3333333333333, Blast_Score=60, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6319658, Length=102, Percent_Identity=33.3333333333333, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001377
- InterPro:   IPR020924 [H]

Pfam domain/function: PF01092 Ribosomal_S6e [H]

EC number: NA

Molecular weight: Translated: 13116; Mature: 12985

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFKFVVSDKDGKSYQFEAETTAVIGKTIGDEINGSIVGLDGYKLKITGGSDKCGFAMR
CCEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEE
HDIHGNMKMRVLLSKAPGYKPQDAGIRKRKTARGNLISSDIVQINTKVVEAGATPISEIV
ECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHH
GQ
CC
>Mature Secondary Structure 
AKFKFVVSDKDGKSYQFEAETTAVIGKTIGDEINGSIVGLDGYKLKITGGSDKCGFAMR
CEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEE
HDIHGNMKMRVLLSKAPGYKPQDAGIRKRKTARGNLISSDIVQINTKVVEAGATPISEIV
ECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHH
GQ
CC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA