Click here to switch to the map view.

The map label for this gene is 150400635

Identifier: 150400635

GI number: 150400635

Start: 212509

End: 213273

Strand: Reverse

Name: 150400635

Synonym: Maeo_0197

Alternate gene names: NA

Gene position: 213273-212509 (Counterclockwise)

Preceding gene: 150400637

Following gene: 150400631

Centisome position: 13.59

GC content: 27.19

Gene sequence:

>765_bases
ATGCCAATAATAGATTCCCATATACATATTGATACAAGACCATATGAAGATTTTGAAAAGTTAGCTATAAATTTAGATTG
TGCTATAACGATGGCACATGACCCATTAAAACCATATAGTATGGACATAATTAGGGCACATTTTGATAAAATACTATATA
ATGAAGTGCAAAAGGCAAATAAAATAGGATTAAAATTATTTGTTTGTTTAGGGATACATCCAAGAATGATACCTGCTGAT
GTGAATTATAATATATTGAAGGAATATTTAAAAAATAAAGATATTGTGGGAGTGGGAGAAATAGGATTAGAAAAATGCAC
AAAAGAAGAAATTGAGGTTTTTGAAAATCAACTAATTATGGCAAAGGAATTAAATCTTCCAGCTGTGGTTCATACTCCAA
GAACCAATAAATATGAAACTACAAAAACTATTTTGGAAGTTATTGAGGGGTTAAATCTAAACAATAACGAAAATATAATA
ATAGAACATTGCACAAAAGAAACCATAAAAATGATATATGATACAAATTTAAAAATGGGATTAACAGTTCAACCCCAAAA
ATTAACTCCTTTGGATGTTGTAGATATTGTAAAACAATATGGGGGCGAAAGATTTTTATTAAATAGTGATAGCTCCTCAG
CACCATCGGATATTCTAGGAGCTCCGAAAACAGTATTAAAAATGAAAATAAATAATATAGATAAAGAAATTATTGAAATG
ATTTCATATAATAATGCAAAAGAAGTATTTAAATTAAATATTTAA

Upstream 100 bases:

>100_bases
ATAAACTCTTTTAAATTATCCATTTTATCACCATTTTATATTTTATACTTATATATTTCATATACGCCATATATCATTTA
TAAAACTTTTAGGTGGTAAA

Downstream 100 bases:

>100_bases
TTTATATTTATTTAAATATATTATTATATTCCACCTTTGCACATTTATCTTGAACCACATTTAAACCCTTTTCTTTTGCT
TTTTTCATTGCTTCATTATT

Product: TatD-related deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPIIDSHIHIDTRPYEDFEKLAINLDCAITMAHDPLKPYSMDIIRAHFDKILYNEVQKANKIGLKLFVCLGIHPRMIPAD
VNYNILKEYLKNKDIVGVGEIGLEKCTKEEIEVFENQLIMAKELNLPAVVHTPRTNKYETTKTILEVIEGLNLNNNENII
IEHCTKETIKMIYDTNLKMGLTVQPQKLTPLDVVDIVKQYGGERFLLNSDSSSAPSDILGAPKTVLKMKINNIDKEIIEM
ISYNNAKEVFKLNI

Sequences:

>Translated_254_residues
MPIIDSHIHIDTRPYEDFEKLAINLDCAITMAHDPLKPYSMDIIRAHFDKILYNEVQKANKIGLKLFVCLGIHPRMIPAD
VNYNILKEYLKNKDIVGVGEIGLEKCTKEEIEVFENQLIMAKELNLPAVVHTPRTNKYETTKTILEVIEGLNLNNNENII
IEHCTKETIKMIYDTNLKMGLTVQPQKLTPLDVVDIVKQYGGERFLLNSDSSSAPSDILGAPKTVLKMKINNIDKEIIEM
ISYNNAKEVFKLNI
>Mature_253_residues
PIIDSHIHIDTRPYEDFEKLAINLDCAITMAHDPLKPYSMDIIRAHFDKILYNEVQKANKIGLKLFVCLGIHPRMIPADV
NYNILKEYLKNKDIVGVGEIGLEKCTKEEIEVFENQLIMAKELNLPAVVHTPRTNKYETTKTILEVIEGLNLNNNENIII
EHCTKETIKMIYDTNLKMGLTVQPQKLTPLDVVDIVKQYGGERFLLNSDSSSAPSDILGAPKTVLKMKINNIDKEIIEMI
SYNNAKEVFKLNI

Specific function: Unknown

COG id: COG1099

COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0761 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR012022 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 28950; Mature: 28819

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01137 TATD_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIIDSHIHIDTRPYEDFEKLAINLDCAITMAHDPLKPYSMDIIRAHFDKILYNEVQKAN
CCCCCCEEEECCCCHHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KIGLKLFVCLGIHPRMIPADVNYNILKEYLKNKDIVGVGEIGLEKCTKEEIEVFENQLIM
HCCEEEEEEECCCCCEEECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCEEE
AKELNLPAVVHTPRTNKYETTKTILEVIEGLNLNNNENIIIEHCTKETIKMIYDTNLKMG
EEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCEEC
LTVQPQKLTPLDVVDIVKQYGGERFLLNSDSSSAPSDILGAPKTVLKMKINNIDKEIIEM
EEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCHHHEEEHHHHHHHHHHHH
ISYNNAKEVFKLNI
HCCCCCHHEEEECC
>Mature Secondary Structure 
PIIDSHIHIDTRPYEDFEKLAINLDCAITMAHDPLKPYSMDIIRAHFDKILYNEVQKAN
CCCCCEEEECCCCHHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KIGLKLFVCLGIHPRMIPADVNYNILKEYLKNKDIVGVGEIGLEKCTKEEIEVFENQLIM
HCCEEEEEEECCCCCEEECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCEEE
AKELNLPAVVHTPRTNKYETTKTILEVIEGLNLNNNENIIIEHCTKETIKMIYDTNLKMG
EEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCEEC
LTVQPQKLTPLDVVDIVKQYGGERFLLNSDSSSAPSDILGAPKTVLKMKINNIDKEIIEM
EEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCHHHEEEHHHHHHHHHHHH
ISYNNAKEVFKLNI
HCCCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]